RNA–Protein interactions for RNA: YHR214C-B

YHR214C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHR214C-B, Length 5,382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHR214C-BYHR214C-B PUP2P32379 260 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B FUN12P39730 1002 aaKnown RBP2.36□□□□□ -2.03
YHR214C-BYHR214C-B MEC3Q02574 474 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B SMC1P32908 1225 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B IFH1P39520 1085 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B ATG3P40344 310 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B AOS1Q06624 347 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B MMS1Q06211 1407 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B RAD26P40352 1085 aa2.36□□□□□ -2.03
YHR214C-BYHR214C-B RNR4P49723 345 aaKnown RBP2.36□□□□□ -2.03
YHR214C-BYHR214C-B RGD1P38339 666 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B SDH5Q08230 162 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B HIR3P47171 1648 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B TPD3P31383 635 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B SAP155P43612 1002 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B AAD16Q02895 342 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B MMS22Q06164 1454 aa2.35□□□□□ -2.03
YHR214C-BYHR214C-B TY1B-AO13527 1196 aaKnown RBP2.34□□□□□ -2.03
YHR214C-BYHR214C-B YEF3P16521 1044 aaKnown RBP2.34□□□□□ -2.04
YHR214C-BYHR214C-B DNF1P32660 1571 aa2.34□□□□□ -2.04
YHR214C-BYHR214C-B RIM101P33400 625 aa2.34□□□□□ -2.04
YHR214C-BYHR214C-B TOM71P38825 639 aaKnown RBP2.34□□□□□ -2.04
YHR214C-BYHR214C-B YKR018CP36114 725 aa2.34□□□□□ -2.04
YHR214C-BYHR214C-B NOP8Q08287 484 aaPredicted RBP2.34□□□□□ -2.04
YHR214C-BYHR214C-B RPS0BP46654 252 aaKnown RBP2.33□□□□□ -2.04
YHR214C-BYHR214C-B ALD3P54114 506 aa2.33□□□□□ -2.04
YHR214C-BYHR214C-B ENV11P53246 860 aa2.33□□□□□ -2.04
YHR214C-BYHR214C-B UBX2Q04228 584 aa2.33□□□□□ -2.04
YHR214C-BYHR214C-B KEX1P09620 729 aa2.33□□□□□ -2.04
YHR214C-BYHR214C-B SMC3P47037 1230 aa2.33□□□□□ -2.04
YHR214C-BYHR214C-B LAM6Q08001 693 aa2.33□□□□□ -2.04
YHR214C-BYHR214C-B SER1P33330 395 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B ZDS2P54786 942 aa2.32□□□□□ -2.04
YHR214C-BYHR214C-B XRN1P22147 1528 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B MPC54Q08550 464 aa2.32□□□□□ -2.04
YHR214C-BYHR214C-B DIP2Q12220 943 aaPredicted RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B KAR2P16474 682 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B KGD2P19262 463 aaPredicted RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B JJJ1P53863 590 aa2.32□□□□□ -2.04
YHR214C-BYHR214C-B NUG1P40010 520 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B ECM16Q04217 1267 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B SEC14P24280 304 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B CLB3P24870 427 aa2.32□□□□□ -2.04
YHR214C-BYHR214C-B NMD2P38798 1089 aaKnown RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B BUD21Q08492 214 aaPredicted RBP2.32□□□□□ -2.04
YHR214C-BYHR214C-B PSF3Q12146 194 aa2.32□□□□□ -2.04
YHR214C-BYHR214C-B CAT8P39113 1433 aa2.31□□□□□ -2.04
YHR214C-BYHR214C-B SPT21P35209 758 aa2.31□□□□□ -2.04
YHR214C-BYHR214C-B EBP2P36049 427 aaKnown RBP2.31□□□□□ -2.04
YHR214C-BYHR214C-B ESP1Q03018 1630 aa2.31□□□□□ -2.04
YHR214C-BYHR214C-B BRN1P38170 754 aa2.31□□□□□ -2.04
YHR214C-BYHR214C-B BUD27P43573 796 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
YHR214C-BYHR214C-B RRP14P36080 434 aaKnown RBP2.31□□□□□ -2.04
YHR214C-BYHR214C-B ARP5P53946 755 aa2.31□□□□□ -2.04
YHR214C-BYHR214C-B DIB1Q06819 143 aaPredicted RBP2.31□□□□□ -2.04
YHR214C-BYHR214C-B YOR1P53049 1477 aa2.3□□□□□ -2.04
YHR214C-BYHR214C-B NUP170P38181 1502 aa2.3□□□□□ -2.04
YHR214C-BYHR214C-B BUD2P33314 1104 aa2.3□□□□□ -2.04
YHR214C-BYHR214C-B YFR006WP43590 535 aa2.3□□□□□ -2.04
YHR214C-BYHR214C-B SEN54Q02825 467 aaPredicted RBP2.3□□□□□ -2.04
YHR214C-BYHR214C-B MAK16P10962 306 aaPredicted RBP2.3□□□□□ -2.04
YHR214C-BYHR214C-B ARP8Q12386 881 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
YHR214C-BYHR214C-B RSC30P38781 883 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B ALD4P46367 519 aaKnown RBP2.29□□□□□ -2.04
YHR214C-BYHR214C-B YLR419WQ06698 1435 aaKnown RBP2.29□□□□□ -2.04
YHR214C-BYHR214C-B MET10P39692 1035 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B RIA1P53893 1110 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B IRC20Q06554 1556 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B CDC19P00549 500 aaKnown RBP2.29□□□□□ -2.04
YHR214C-BYHR214C-B UGA2P38067 497 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B TAF5P38129 798 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B BRE2P43132 505 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B ORC1P54784 914 aaPredicted RBP2.29□□□□□ -2.04
YHR214C-BYHR214C-B GEA1P47102 1408 aaPredicted RBP2.29□□□□□ -2.04
YHR214C-BYHR214C-B PEP1P32319 1579 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B AVT3P36062 692 aa2.29□□□□□ -2.04
YHR214C-BYHR214C-B YCF1P39109 1515 aaKnown RBP2.29□□□□□ -2.04
YHR214C-BYHR214C-B VPS15P22219 1454 aa2.28□□□□□ -2.04
YHR214C-BYHR214C-B ISW1P38144 1129 aa2.28□□□□□ -2.04
YHR214C-BYHR214C-B MET5P47169 1442 aa2.28□□□□□ -2.04
YHR214C-BYHR214C-B YKL023WP36103 277 aaKnown RBP2.28□□□□□ -2.04
YHR214C-BYHR214C-B EIS1Q05050 843 aaKnown RBP2.28□□□□□ -2.04
YHR214C-BYHR214C-B NUP159P40477 1460 aa2.28□□□□□ -2.04
YHR214C-BYHR214C-B GAL2P13181 574 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B HSP104P31539 908 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B ALD2P47771 506 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B YNL035CP53962 389 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B MYO4P32492 1471 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B SPP41P38904 1435 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B FET4P40988 552 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B SGM1P47166 707 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B SEC3P33332 1336 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B MCM6P53091 1017 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B GRX6Q12438 231 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B SSA2P10592 639 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B CDC48P25694 835 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B YDR341CQ05506 607 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B TCA17P32613 152 aa2.27□□□□□ -2.05
YHR214C-BYHR214C-B SMY2P32909 740 aaKnown RBP2.27□□□□□ -2.05
YHR214C-BYHR214C-B PAN1P32521 1480 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms