RNA–Protein interactions for RNA: YGL045W

RIM8, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM8, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM8	YGL045W	MMS1	Q06211	1407 aa		11.56	□□□□□ -0.56
RIM8	YGL045W	YGR130C	P53278	816 aa		11.55	□□□□□ -0.56
RIM8	YGL045W	PAF1	P38351	445 aa		11.54	□□□□□ -0.56
RIM8	YGL045W	RPS0B	P46654	252 aa	Known RBP	11.52	□□□□□ -0.57
RIM8	YGL045W	PDR15	Q04182	1529 aa	Known RBP	11.51	□□□□□ -0.57
RIM8	YGL045W	FUN12	P39730	1002 aa	Known RBP	11.5	□□□□□ -0.57
RIM8	YGL045W	NOP53	Q12080	455 aa	Known RBP	11.49	□□□□□ -0.57
RIM8	YGL045W	SLN1	P39928	1220 aa	Predicted RBP	11.48	□□□□□ -0.57
RIM8	YGL045W	VPS15	P22219	1454 aa		11.47	□□□□□ -0.57
RIM8	YGL045W	RPP0	P05317	312 aa	Known RBP	11.42	□□□□□ -0.58
RIM8	YGL045W	CDC45	Q08032	650 aa		11.42	□□□□□ -0.58
RIM8	YGL045W	TY3B-G	Q99315	1547 aa		11.42	□□□□□ -0.58
RIM8	YGL045W	CTR9	P89105	1077 aa		11.42	□□□□□ -0.58
RIM8	YGL045W	RPO31	P04051	1460 aa		11.41	□□□□□ -0.58
RIM8	YGL045W	NOT3	P06102	836 aa	Known RBP	11.41	□□□□□ -0.58
RIM8	YGL045W	NOP58	Q12499	511 aa	Known RBP	11.41	□□□□□ -0.58
RIM8	YGL045W	VPS27	P40343	622 aa	Known RBP	11.4	□□□□□ -0.58
RIM8	YGL045W	EDE1	P34216	1381 aa		11.39	□□□□□ -0.59
RIM8	YGL045W	PCT1	P13259	424 aa		11.38	□□□□□ -0.59
RIM8	YGL045W	CWC22	P53333	577 aa	Known RBP	11.38	□□□□□ -0.59
RIM8	YGL045W	DNF1	P32660	1571 aa		11.37	□□□□□ -0.59
RIM8	YGL045W	PDS5	Q04264	1277 aa		11.37	□□□□□ -0.59
RIM8	YGL045W	RVB2	Q12464	471 aa	Known RBP	11.37	□□□□□ -0.59
RIM8	YGL045W	ESC1	Q03661	1658 aa	Known RBP	11.37	□□□□□ -0.59
RIM8	YGL045W	ULS1	Q08562	1619 aa		11.36	□□□□□ -0.59
RIM8	YGL045W	PDR5	P33302	1511 aa	Known RBP	11.36	□□□□□ -0.59
RIM8	YGL045W	DJP1	P40564	432 aa		11.35	□□□□□ -0.59
RIM8	YGL045W	NOP7	P53261	605 aa	Known RBP	11.35	□□□□□ -0.59
RIM8	YGL045W	MSP1	P28737	362 aa		11.34	□□□□□ -0.59
RIM8	YGL045W	SPT21	P35209	758 aa		11.34	□□□□□ -0.59
RIM8	YGL045W	VPS24	P36095	224 aa	Known RBP	11.34	□□□□□ -0.59
RIM8	YGL045W	NAP1	P25293	417 aa	Known RBP	11.33	□□□□□ -0.6
RIM8	YGL045W	NUG1	P40010	520 aa	Known RBP	11.33	□□□□□ -0.6
RIM8	YGL045W	GCN2	P15442	1659 aa		11.33	□□□□□ -0.6
RIM8	YGL045W	ATG2	P53855	1592 aa		11.33	□□□□□ -0.6
RIM8	YGL045W	RIX1	P38883	763 aa	Predicted RBP	11.32	□□□□□ -0.6
RIM8	YGL045W	YRB30	P53107	440 aa	Predicted RBP	11.31	□□□□□ -0.6
RIM8	YGL045W	NST1	P53935	1240 aa		11.31	□□□□□ -0.6
RIM8	YGL045W	GEA2	P39993	1459 aa	Known RBP	11.3	□□□□□ -0.6
RIM8	YGL045W	KNS1	P32350	737 aa	Predicted RBP	11.29	□□□□□ -0.6
RIM8	YGL045W	YPP1	P46951	817 aa		11.29	□□□□□ -0.6
RIM8	YGL045W	ORC1	P54784	914 aa	Predicted RBP	11.29	□□□□□ -0.6
RIM8	YGL045W	ARL1	P38116	183 aa	Known RBP	11.27	□□□□□ -0.6
RIM8	YGL045W	ENV11	P53246	860 aa		11.27	□□□□□ -0.61
RIM8	YGL045W	NUP157	P40064	1391 aa	Known RBP	11.26	□□□□□ -0.61
RIM8	YGL045W	LSP1	Q12230	341 aa	Known RBP	11.26	□□□□□ -0.61
RIM8	YGL045W	GDB1	Q06625	1536 aa		11.26	□□□□□ -0.61
RIM8	YGL045W	TY3B-I	Q7LHG5	1498 aa	Known RBP	11.25	□□□□□ -0.61
RIM8	YGL045W	RNA1	P11745	407 aa	Known RBP	11.24	□□□□□ -0.61
RIM8	YGL045W	KIP3	P53086	805 aa	Known RBP	11.24	□□□□□ -0.61
RIM8	YGL045W	IOC4	Q04213	475 aa		11.23	□□□□□ -0.61
RIM8	YGL045W	SMC3	P47037	1230 aa		11.22	□□□□□ -0.61
RIM8	YGL045W	FPR4	Q06205	392 aa	Predicted RBP	11.22	□□□□□ -0.61
RIM8	YGL045W	TRM3	Q07527	1436 aa		11.22	□□□□□ -0.61
RIM8	YGL045W	RAD26	P40352	1085 aa		11.2	□□□□□ -0.62
RIM8	YGL045W	SNT2	P53127	1403 aa		11.18	□□□□□ -0.62
RIM8	YGL045W	TEA1	P47988	759 aa		11.18	□□□□□ -0.62
RIM8	YGL045W	CAT8	P39113	1433 aa		11.17	□□□□□ -0.62
RIM8	YGL045W	SPC110	P32380	944 aa		11.17	□□□□□ -0.62
RIM8	YGL045W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
RIM8	YGL045W	TY1B-DR3	Q99231	1755 aa		11.15	□□□□□ -0.62
RIM8	YGL045W	DEF1	P35732	738 aa	Known RBP	11.14	□□□□□ -0.63
RIM8	YGL045W	RPN1	P38764	993 aa	Known RBP	11.14	□□□□□ -0.63
RIM8	YGL045W	YDL144C	Q07589	356 aa		11.14	□□□□□ -0.63
RIM8	YGL045W	YBT1	P32386	1661 aa		11.14	□□□□□ -0.63
RIM8	YGL045W	SUI2	P20459	304 aa	Known RBP	11.13	□□□□□ -0.63
RIM8	YGL045W	TPM2	P40414	161 aa		11.1	□□□□□ -0.63
RIM8	YGL045W	PIL1	P53252	339 aa	Known RBP	11.09	□□□□□ -0.63
RIM8	YGL045W	NMD2	P38798	1089 aa	Known RBP	11.09	□□□□□ -0.63
RIM8	YGL045W	CHZ1	P40019	153 aa	Predicted RBP	11.09	□□□□□ -0.63
RIM8	YGL045W	LCD1	Q04377	747 aa		11.09	□□□□□ -0.63
RIM8	YGL045W	ARO1	P08566	1588 aa	Known RBP	11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-LR1	P0C2J3	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-F	P0CX63	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-GR2	P0CX64	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-C	P25384	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-DR2	Q03494	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY1B-DR1	Q03855	1755 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-DR3	Q07791	1770 aa	Known RBP	11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-OR1	Q12113	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-DR1	Q12472	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TY2B-OR2	Q12501	1770 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	TCD1	P38756	429 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	HAP5	Q02516	242 aa		11.06	□□□□□ -0.64
RIM8	YGL045W	CIN4	P39110	191 aa		11.05	□□□□□ -0.64
RIM8	YGL045W	DIP2	Q12220	943 aa	Predicted RBP	11.05	□□□□□ -0.64
RIM8	YGL045W	RAD2	P07276	1031 aa		11.04	□□□□□ -0.64
RIM8	YGL045W	ESC2	Q06340	456 aa		11.02	□□□□□ -0.64
RIM8	YGL045W	TY2B-B	Q12491	1770 aa		11.02	□□□□□ -0.65
RIM8	YGL045W	KRI1	P42846	591 aa	Known RBP	11.02	□□□□□ -0.65
RIM8	YGL045W	ITC1	P53125	1264 aa		11.02	□□□□□ -0.65
RIM8	YGL045W	RSC1	P53236	928 aa		11.02	□□□□□ -0.65
RIM8	YGL045W	VTH1	P40438	1549 aa		11.01	□□□□□ -0.65
RIM8	YGL045W	VTH2	P40890	1549 aa		11.01	□□□□□ -0.65
RIM8	YGL045W	CLB5	P30283	435 aa		11.01	□□□□□ -0.65
RIM8	YGL045W	BUD21	Q08492	214 aa	Predicted RBP	11.01	□□□□□ -0.65
RIM8	YGL045W	IQG1	Q12280	1495 aa		11.01	□□□□□ -0.65
RIM8	YGL045W	HOS3	Q02959	697 aa	Known RBP	11	□□□□□ -0.65
RIM8	YGL045W	COG8	Q04632	607 aa		11	□□□□□ -0.65
RIM8	YGL045W	SCT1	P32784	759 aa		10.99	□□□□□ -0.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms