RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W TY1B-BRQ12193 1756 aa2.98□□□□□ -1.93
SXM1YDR395W TY1B-GR3Q12316 1755 aa2.98□□□□□ -1.93
SXM1YDR395W TY1B-ORQ92393 1755 aa2.98□□□□□ -1.93
SXM1YDR395W TGL3P40308 642 aa2.97□□□□□ -1.93
SXM1YDR395W GDB1Q06625 1536 aa2.96□□□□□ -1.94
SXM1YDR395W UFD4P33202 1483 aa2.94□□□□□ -1.94
SXM1YDR395W ENV9Q08651 330 aa2.94□□□□□ -1.94
SXM1YDR395W TOP2P06786 1428 aaKnown RBP2.94□□□□□ -1.94
SXM1YDR395W SLX5P32828 619 aaKnown RBP2.93□□□□□ -1.94
SXM1YDR395W GTT3P39996 337 aa2.93□□□□□ -1.94
SXM1YDR395W YMR074CQ04773 145 aa2.93□□□□□ -1.94
SXM1YDR395W BFR2Q06631 534 aaKnown RBP2.92□□□□□ -1.94
SXM1YDR395W MST1P07236 462 aa2.91□□□□□ -1.94
SXM1YDR395W OXP1P28273 1286 aa2.91□□□□□ -1.94
SXM1YDR395W NUP159P40477 1460 aa2.9□□□□□ -1.94
SXM1YDR395W BUD3P25558 1636 aa2.9□□□□□ -1.95
SXM1YDR395W TIF4632P39936 914 aaKnown RBP2.89□□□□□ -1.95
SXM1YDR395W IML1P47170 1584 aa2.89□□□□□ -1.95
SXM1YDR395W BDF1P35817 686 aa2.89□□□□□ -1.95
SXM1YDR395W YMR196WQ04336 1088 aa2.88□□□□□ -1.95
SXM1YDR395W BCK1Q01389 1478 aa2.88□□□□□ -1.95
SXM1YDR395W MAC1P35192 417 aa2.88□□□□□ -1.95
SXM1YDR395W YIL055CP40523 627 aaKnown RBP2.88□□□□□ -1.95
SXM1YDR395W DUS1P53759 423 aaKnown RBP2.88□□□□□ -1.95
SXM1YDR395W MYO4P32492 1471 aa2.88□□□□□ -1.95
SXM1YDR395W ARO1P08566 1588 aaKnown RBP2.88□□□□□ -1.95
SXM1YDR395W SIS1P25294 352 aaKnown RBP2.87□□□□□ -1.95
SXM1YDR395W RPO21P04050 1733 aaKnown RBP2.87□□□□□ -1.95
SXM1YDR395W BNR1P40450 1375 aa2.87□□□□□ -1.95
SXM1YDR395W MMS22Q06164 1454 aa2.87□□□□□ -1.95
SXM1YDR395W SNT2P53127 1403 aa2.87□□□□□ -1.95
SXM1YDR395W YRF1-2P40105 1681 aa2.87□□□□□ -1.95
SXM1YDR395W EPS1P40557 701 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-HO13535 1793 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-DR5P0C2I2 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-DR6P0C2I3 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-LR2P0C2I5 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-LR3P0C2I6 1755 aaKnown RBP2.86□□□□□ -1.95
SXM1YDR395W TY1B-PR1P0C2I9 1755 aaKnown RBP2.86□□□□□ -1.95
SXM1YDR395W TY1B-PR2P0C2J0 1756 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-PR3P0C2J1 1755 aaKnown RBP2.86□□□□□ -1.95
SXM1YDR395W TY1B-JR1P47098 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-ML2Q03434 1755 aaKnown RBP2.86□□□□□ -1.95
SXM1YDR395W TY1B-ER1Q03612 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-ML1Q04711 1755 aaKnown RBP2.86□□□□□ -1.95
SXM1YDR395W TY1B-GR2Q12269 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-OLQ12273 1755 aa2.86□□□□□ -1.95
SXM1YDR395W TY1B-PLQ12414 1755 aaKnown RBP2.86□□□□□ -1.95
SXM1YDR395W ULS1Q08562 1619 aa2.85□□□□□ -1.95
SXM1YDR395W YOR1P53049 1477 aa2.85□□□□□ -1.95
SXM1YDR395W UBP9P39967 754 aa2.85□□□□□ -1.95
SXM1YDR395W POM152P39685 1337 aa2.84□□□□□ -1.95
SXM1YDR395W XRN1P22147 1528 aaKnown RBP2.84□□□□□ -1.95
SXM1YDR395W PDR10P51533 1564 aa2.84□□□□□ -1.95
SXM1YDR395W YBL029C-AQ3E756 94 aa2.84□□□□□ -1.95
SXM1YDR395W STU1P38198 1513 aa2.84□□□□□ -1.96
SXM1YDR395W USO1P25386 1790 aa2.84□□□□□ -1.96
SXM1YDR395W TY3B-GQ99315 1547 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-LR1P0C2J3 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-FP0CX63 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-GR2P0CX64 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-CP25384 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-DR2Q03494 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY1B-DR1Q03855 1755 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-DR3Q07791 1770 aaKnown RBP2.83□□□□□ -1.96
SXM1YDR395W TY2B-OR1Q12113 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-DR1Q12472 1770 aa2.83□□□□□ -1.96
SXM1YDR395W TY2B-OR2Q12501 1770 aa2.83□□□□□ -1.96
SXM1YDR395W NSR1P27476 414 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SXM1YDR395W POL1P13382 1468 aa2.81□□□□□ -1.96
SXM1YDR395W SPP41P38904 1435 aa2.81□□□□□ -1.96
SXM1YDR395W YTA7P40340 1379 aa2.8□□□□□ -1.96
SXM1YDR395W VNX1P42839 908 aa2.8□□□□□ -1.96
SXM1YDR395W SKI3P17883 1432 aaKnown RBP2.79□□□□□ -1.96
SXM1YDR395W PEX21P50091 288 aa2.78□□□□□ -1.96
SXM1YDR395W PDR12Q02785 1511 aa2.78□□□□□ -1.96
SXM1YDR395W AIR2Q12476 344 aaKnown RBP2.78□□□□□ -1.97
SXM1YDR395W SMC4Q12267 1418 aa2.77□□□□□ -1.97
SXM1YDR395W VMR1P38735 1592 aa2.77□□□□□ -1.97
SXM1YDR395W SDH2P21801 266 aa2.76□□□□□ -1.97
SXM1YDR395W TY2B-BQ12491 1770 aa2.76□□□□□ -1.97
SXM1YDR395W MAK10Q02197 733 aa2.76□□□□□ -1.97
SXM1YDR395W YOR238WQ08634 303 aa2.75□□□□□ -1.97
SXM1YDR395W PUS5Q06244 254 aa2.75□□□□□ -1.97
SXM1YDR395W MLP2P40457 1679 aa2.75□□□□□ -1.97
SXM1YDR395W IQG1Q12280 1495 aa2.75□□□□□ -1.97
SXM1YDR395W UBP1P25037 809 aa2.74□□□□□ -1.97
SXM1YDR395W FKH1P40466 484 aa2.74□□□□□ -1.97
SXM1YDR395W YBT1P32386 1661 aa2.74□□□□□ -1.97
SXM1YDR395W TY1B-JR2P47100 1755 aaKnown RBP2.74□□□□□ -1.97
SXM1YDR395W TY1B-ER2Q03619 1755 aa2.74□□□□□ -1.97
SXM1YDR395W TY1B-MR1Q04214 1755 aa2.74□□□□□ -1.97
SXM1YDR395W TY1B-MR2Q04670 1755 aaKnown RBP2.74□□□□□ -1.97
SXM1YDR395W TY1B-LR1Q12088 1755 aaKnown RBP2.74□□□□□ -1.97
SXM1YDR395W TY1B-NL1Q12112 1755 aa2.74□□□□□ -1.97
SXM1YDR395W TY1B-GR1Q12141 1755 aa2.74□□□□□ -1.97
SXM1YDR395W TY1B-BLQ12490 1755 aa2.74□□□□□ -1.97
SXM1YDR395W SNF2P22082 1703 aa2.74□□□□□ -1.97
SXM1YDR395W TFA1P36100 482 aa2.74□□□□□ -1.97
SXM1YDR395W AI2P03876 854 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms