RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeastyeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUP1YCR084C MPP10P47083 593 aaKnown RBP6.26□□□□□ -1.41
TUP1YCR084C KIP3P53086 805 aaKnown RBP6.26□□□□□ -1.41
TUP1YCR084C PRS1P32895 427 aaKnown RBP6.25□□□□□ -1.41
TUP1YCR084C SPT16P32558 1035 aaKnown RBP6.25□□□□□ -1.41
TUP1YCR084C CKB1P43639 278 aa6.25□□□□□ -1.41
TUP1YCR084C BRE1Q07457 700 aaKnown RBP6.25□□□□□ -1.41
TUP1YCR084C YTA7P40340 1379 aa6.24□□□□□ -1.41
TUP1YCR084C PTP3P40048 928 aa6.24□□□□□ -1.41
TUP1YCR084C TCB2P48231 1178 aa6.24□□□□□ -1.41
TUP1YCR084C GRX3Q03835 250 aa6.23□□□□□ -1.41
TUP1YCR084C MYO2P19524 1574 aaKnown RBP6.23□□□□□ -1.41
TUP1YCR084C SLX8P40072 274 aa6.22□□□□□ -1.41
TUP1YCR084C ECM5Q03214 1411 aa6.21□□□□□ -1.42
TUP1YCR084C CLC1P17891 233 aa6.21□□□□□ -1.42
TUP1YCR084C PAM1P37304 830 aaKnown RBP6.21□□□□□ -1.42
TUP1YCR084C MRX12P47084 519 aa6.21□□□□□ -1.42
TUP1YCR084C FPR3P38911 411 aaKnown RBP6.2□□□□□ -1.42
TUP1YCR084C HSL1P34244 1518 aa6.2□□□□□ -1.42
TUP1YCR084C RNA1P11745 407 aaKnown RBP6.2□□□□□ -1.42
TUP1YCR084C NOP7P53261 605 aaKnown RBP6.2□□□□□ -1.42
TUP1YCR084C SSM4P40318 1319 aa6.2□□□□□ -1.42
TUP1YCR084C NAB3P38996 802 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
TUP1YCR084C HSP82P02829 709 aaKnown RBP6.18□□□□□ -1.42
TUP1YCR084C RAD2P07276 1031 aa6.18□□□□□ -1.42
TUP1YCR084C RTT106P40161 455 aa6.18□□□□□ -1.42
TUP1YCR084C SPT6P23615 1451 aaKnown RBP6.18□□□□□ -1.42
TUP1YCR084C STU1P38198 1513 aa6.18□□□□□ -1.42
TUP1YCR084C IME2P32581 645 aa6.17□□□□□ -1.42
TUP1YCR084C AIM21P40563 679 aa6.17□□□□□ -1.42
TUP1YCR084C TY4A-JP47023 414 aa6.17□□□□□ -1.42
TUP1YCR084C THO2P53552 1597 aaKnown RBP6.17□□□□□ -1.42
TUP1YCR084C RPT2P40327 437 aaKnown RBP6.16□□□□□ -1.42
TUP1YCR084C YMR196WQ04336 1088 aa6.16□□□□□ -1.42
TUP1YCR084C TY1B-DR4Q07793 1604 aa6.15□□□□□ -1.42
TUP1YCR084C GAL11P19659 1081 aa6.15□□□□□ -1.42
TUP1YCR084C SEC20P28791 383 aa6.15□□□□□ -1.42
TUP1YCR084C OCA5P38738 679 aa6.15□□□□□ -1.42
TUP1YCR084C PLP2Q12017 286 aa6.15□□□□□ -1.42
TUP1YCR084C HOS4P40480 1083 aa6.14□□□□□ -1.43
TUP1YCR084C GIR2Q03768 265 aaPredicted RBP6.14□□□□□ -1.43
TUP1YCR084C UBX5Q06682 500 aa6.14□□□□□ -1.43
TUP1YCR084C REV3P14284 1504 aa6.14□□□□□ -1.43
TUP1YCR084C EAF7P53911 425 aaKnown RBP6.13□□□□□ -1.43
TUP1YCR084C HIR3P47171 1648 aa6.13□□□□□ -1.43
TUP1YCR084C CFT1Q06632 1357 aaKnown RBP6.13□□□□□ -1.43
TUP1YCR084C TAF2P23255 1407 aa6.13□□□□□ -1.43
TUP1YCR084C PDR10P51533 1564 aa6.12□□□□□ -1.43
TUP1YCR084C RPA135P22138 1203 aaKnown RBP6.12□□□□□ -1.43
TUP1YCR084C NUP170P38181 1502 aa6.12□□□□□ -1.43
TUP1YCR084C PSK2Q08217 1101 aa6.12□□□□□ -1.43
TUP1YCR084C MAM3Q12296 706 aa6.12□□□□□ -1.43
TUP1YCR084C PMC1P38929 1173 aaPredicted RBP6.11□□□□□ -1.43
TUP1YCR084C BPT1P14772 1559 aa6.11□□□□□ -1.43
TUP1YCR084C SCC2Q04002 1493 aa6.11□□□□□ -1.43
TUP1YCR084C BUD4P47136 1447 aa6.11□□□□□ -1.43
TUP1YCR084C MCM1P11746 286 aa6.11□□□□□ -1.43
TUP1YCR084C MPE1P35728 441 aaKnown RBP6.11□□□□□ -1.43
TUP1YCR084C NOP53Q12080 455 aaKnown RBP6.11□□□□□ -1.43
TUP1YCR084C SSK2P53599 1579 aa6.1□□□□□ -1.43
TUP1YCR084C SEC9P40357 651 aa6.1□□□□□ -1.43
TUP1YCR084C PKH1Q03407 766 aa6.1□□□□□ -1.43
TUP1YCR084C CEF1Q03654 590 aaPredicted RBP6.1□□□□□ -1.43
TUP1YCR084C RPC31P17890 251 aa6.09□□□□□ -1.43
TUP1YCR084C SIN3P22579 1536 aa6.08□□□□□ -1.44
TUP1YCR084C OPY1P38271 328 aa6.08□□□□□ -1.44
TUP1YCR084C MET10P39692 1035 aa6.08□□□□□ -1.44
TUP1YCR084C POL1P13382 1468 aa6.08□□□□□ -1.44
TUP1YCR084C PAN1P32521 1480 aa6.08□□□□□ -1.44
TUP1YCR084C SRB8P25648 1427 aa6.08□□□□□ -1.44
TUP1YCR084C PEP1P32319 1579 aa6.08□□□□□ -1.44
TUP1YCR084C SSA4P22202 642 aaKnown RBP6.07□□□□□ -1.44
TUP1YCR084C NMD3P38861 518 aaKnown RBP6.07□□□□□ -1.44
TUP1YCR084C FUN12P39730 1002 aaKnown RBP6.07□□□□□ -1.44
TUP1YCR084C MEH1Q02205 184 aa6.07□□□□□ -1.44
TUP1YCR084C MLP2P40457 1679 aa6.07□□□□□ -1.44
TUP1YCR084C NFU1P32860 256 aa6.06□□□□□ -1.44
TUP1YCR084C YNL011CP53980 444 aa6.06□□□□□ -1.44
TUP1YCR084C SPT21P35209 758 aa6.05□□□□□ -1.44
TUP1YCR084C FAF1P40546 346 aaPredicted RBP6.05□□□□□ -1.44
TUP1YCR084C PSD2P53037 1138 aaKnown RBP6.05□□□□□ -1.44
TUP1YCR084C YAF9P53930 226 aa6.05□□□□□ -1.44
TUP1YCR084C FAP1P53971 965 aa6.05□□□□□ -1.44
TUP1YCR084C GDE1Q02979 1223 aa6.05□□□□□ -1.44
TUP1YCR084C FPR4Q06205 392 aaPredicted RBP6.05□□□□□ -1.44
TUP1YCR084C BOI2P39969 1040 aa6.05□□□□□ -1.44
TUP1YCR084C SMC4Q12267 1418 aa6.04□□□□□ -1.44
TUP1YCR084C TY1B-AO13527 1196 aaKnown RBP6.04□□□□□ -1.44
TUP1YCR084C TOM20P35180 183 aa6.04□□□□□ -1.44
TUP1YCR084C YDL121CQ07541 149 aa6.04□□□□□ -1.44
TUP1YCR084C VMA4P22203 233 aaKnown RBP6.04□□□□□ -1.44
TUP1YCR084C DJP1P40564 432 aa6.04□□□□□ -1.44
TUP1YCR084C YSH1Q06224 779 aaPredicted RBP6.04□□□□□ -1.44
TUP1YCR084C ESP1Q03018 1630 aa6.03□□□□□ -1.44
TUP1YCR084C RRN6P32786 894 aa6.03□□□□□ -1.44
TUP1YCR084C TAF1P46677 1066 aa6.03□□□□□ -1.44
TUP1YCR084C YLR419WQ06698 1435 aaKnown RBP6.03□□□□□ -1.44
TUP1YCR084C SUB2Q07478 446 aaKnown RBP6.02□□□□□ -1.45
TUP1YCR084C TOP2P06786 1428 aaKnown RBP6.02□□□□□ -1.45
TUP1YCR084C SNF7P39929 240 aaKnown RBP6.02□□□□□ -1.45
TUP1YCR084C PEA2P40091 420 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms