RNA–Protein interactions for RNA: ENST00000640428.1

CNTN2-232, Transcript of contactin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNTN2, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-232ENST00000640428 TRIM52Q96A61 297 aa16.49■□□□□ 0.23
CNTN2-232ENST00000640428 NEFLP07196 543 aa16.47■□□□□ 0.23
CNTN2-232ENST00000640428 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
CNTN2-232ENST00000640428 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
CNTN2-232ENST00000640428 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
CNTN2-232ENST00000640428 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
CNTN2-232ENST00000640428 BCANQ96GW7 911 aa16.45■□□□□ 0.22
CNTN2-232ENST00000640428 DHX57Q6P158 1386 aaKnown RBP16.45■□□□□ 0.22
CNTN2-232ENST00000640428 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
CNTN2-232ENST00000640428 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
CNTN2-232ENST00000640428 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
CNTN2-232ENST00000640428 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
CNTN2-232ENST00000640428 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
CNTN2-232ENST00000640428 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
CNTN2-232ENST00000640428 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
CNTN2-232ENST00000640428 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
CNTN2-232ENST00000640428 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
CNTN2-232ENST00000640428 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
CNTN2-232ENST00000640428 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
CNTN2-232ENST00000640428 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
CNTN2-232ENST00000640428 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
CNTN2-232ENST00000640428 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
CNTN2-232ENST00000640428 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
CNTN2-232ENST00000640428 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
CNTN2-232ENST00000640428 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
CNTN2-232ENST00000640428 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
CNTN2-232ENST00000640428 MYT1Q01538 1121 aa16.29■□□□□ 0.2
CNTN2-232ENST00000640428 LAMC3Q9Y6N6 1575 aa16.28■□□□□ 0.2
CNTN2-232ENST00000640428 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.2
CNTN2-232ENST00000640428 TONSLQ96HA7 1378 aa16.27■□□□□ 0.19
CNTN2-232ENST00000640428 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
CNTN2-232ENST00000640428 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
CNTN2-232ENST00000640428 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
CNTN2-232ENST00000640428 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
CNTN2-232ENST00000640428 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNTN2-232ENST00000640428 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
CNTN2-232ENST00000640428 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
CNTN2-232ENST00000640428 LRRC9Q6ZRR7 1453 aa16.18■□□□□ 0.18
CNTN2-232ENST00000640428 ANP32CO43423 234 aa16.17■□□□□ 0.18
CNTN2-232ENST00000640428 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
CNTN2-232ENST00000640428 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
CNTN2-232ENST00000640428 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
CNTN2-232ENST00000640428 PHLDB1Q86UU1 1377 aa16.16■□□□□ 0.18
CNTN2-232ENST00000640428 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
CNTN2-232ENST00000640428 CASKIN1Q8WXD9 1431 aa16.14■□□□□ 0.17
CNTN2-232ENST00000640428 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
CNTN2-232ENST00000640428 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
CNTN2-232ENST00000640428 FKBP8Q14318 412 aa16.12■□□□□ 0.17
CNTN2-232ENST00000640428 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
CNTN2-232ENST00000640428 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
CNTN2-232ENST00000640428 PRDM2Q13029 1718 aa16.11■□□□□ 0.17
CNTN2-232ENST00000640428 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
CNTN2-232ENST00000640428 TSPY4P0CV99 314 aa16.09■□□□□ 0.17
CNTN2-232ENST00000640428 TSPY10P0CW01 314 aa16.09■□□□□ 0.17
CNTN2-232ENST00000640428 CUL7Q14999 1698 aa16.09■□□□□ 0.17
CNTN2-232ENST00000640428 CARMIL2Q6F5E8 1435 aa16.08■□□□□ 0.16
CNTN2-232ENST00000640428 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
CNTN2-232ENST00000640428 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
CNTN2-232ENST00000640428 JPH4Q96JJ6 628 aa16.06■□□□□ 0.16
CNTN2-232ENST00000640428 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
CNTN2-232ENST00000640428 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
CNTN2-232ENST00000640428 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
CNTN2-232ENST00000640428 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
CNTN2-232ENST00000640428 TIMELESSQ9UNS1 1208 aa16.04■□□□□ 0.16
CNTN2-232ENST00000640428 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
CNTN2-232ENST00000640428 CCDC18Q5T9S5 1454 aa16.01■□□□□ 0.15
CNTN2-232ENST00000640428 IRX6P78412 446 aaPredicted RBP16■□□□□ 0.15
CNTN2-232ENST00000640428 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
CNTN2-232ENST00000640428 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
CNTN2-232ENST00000640428 NCOA2Q15596 1464 aa15.98■□□□□ 0.15
CNTN2-232ENST00000640428 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.15
CNTN2-232ENST00000640428 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
CNTN2-232ENST00000640428 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
CNTN2-232ENST00000640428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
CNTN2-232ENST00000640428 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
CNTN2-232ENST00000640428 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
CNTN2-232ENST00000640428 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
CNTN2-232ENST00000640428 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
CNTN2-232ENST00000640428 FOXD1Q16676 465 aa15.91■□□□□ 0.14
CNTN2-232ENST00000640428 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
CNTN2-232ENST00000640428 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
CNTN2-232ENST00000640428 MPHOSPH9Q99550 1183 aa15.91■□□□□ 0.14
CNTN2-232ENST00000640428 KIAA0586Q9BVV6 1533 aa15.88■□□□□ 0.13
CNTN2-232ENST00000640428 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
CNTN2-232ENST00000640428 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
CNTN2-232ENST00000640428 KDM2AQ9Y2K7 1162 aa15.87■□□□□ 0.13
CNTN2-232ENST00000640428 ZNF644Q9H582 1327 aaPredicted RBP15.85■□□□□ 0.13
CNTN2-232ENST00000640428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.85■□□□□ 0.13
CNTN2-232ENST00000640428 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
CNTN2-232ENST00000640428 PTPRGP23470 1445 aa15.85■□□□□ 0.13
CNTN2-232ENST00000640428 HECW1Q76N89 1606 aa15.84■□□□□ 0.13
CNTN2-232ENST00000640428 PTPRKQ15262 1439 aa15.84■□□□□ 0.13
CNTN2-232ENST00000640428 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.13
CNTN2-232ENST00000640428 UACAQ9BZF9 1416 aa15.83■□□□□ 0.12
CNTN2-232ENST00000640428 CDK13Q14004 1512 aaKnown RBP15.82■□□□□ 0.12
CNTN2-232ENST00000640428 GRIN2AQ12879 1464 aa15.82■□□□□ 0.12
CNTN2-232ENST00000640428 ANKRD30AQ9BXX3 1397 aa15.81■□□□□ 0.12
CNTN2-232ENST00000640428 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
CNTN2-232ENST00000640428 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
CNTN2-232ENST00000640428 PKD2Q13563 968 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms