RNA–Protein interactions for RNA: ENST00000640428.1

CNTN2-232, Transcript of contactin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNTN2, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN2-232ENST00000640428 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
CNTN2-232ENST00000640428 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
CNTN2-232ENST00000640428 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
CNTN2-232ENST00000640428 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
CNTN2-232ENST00000640428 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
CNTN2-232ENST00000640428 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
CNTN2-232ENST00000640428 ABCC9O60706 1549 aa18.95■□□□□ 0.62
CNTN2-232ENST00000640428 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
CNTN2-232ENST00000640428 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
CNTN2-232ENST00000640428 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
CNTN2-232ENST00000640428 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
CNTN2-232ENST00000640428 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
CNTN2-232ENST00000640428 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
CNTN2-232ENST00000640428 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
CNTN2-232ENST00000640428 HRCP23327 699 aa18.64■□□□□ 0.57
CNTN2-232ENST00000640428 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
CNTN2-232ENST00000640428 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
CNTN2-232ENST00000640428 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
CNTN2-232ENST00000640428 NACADO15069 1562 aa18.33■□□□□ 0.52
CNTN2-232ENST00000640428 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
CNTN2-232ENST00000640428 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
CNTN2-232ENST00000640428 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
CNTN2-232ENST00000640428 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
CNTN2-232ENST00000640428 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
CNTN2-232ENST00000640428 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
CNTN2-232ENST00000640428 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
CNTN2-232ENST00000640428 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
CNTN2-232ENST00000640428 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.45
CNTN2-232ENST00000640428 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
CNTN2-232ENST00000640428 APLP2Q06481 763 aa17.76■□□□□ 0.43
CNTN2-232ENST00000640428 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
CNTN2-232ENST00000640428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
CNTN2-232ENST00000640428 WIZO95785 1651 aa17.66■□□□□ 0.42
CNTN2-232ENST00000640428 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
CNTN2-232ENST00000640428 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
CNTN2-232ENST00000640428 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
CNTN2-232ENST00000640428 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
CNTN2-232ENST00000640428 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
CNTN2-232ENST00000640428 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
CNTN2-232ENST00000640428 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
CNTN2-232ENST00000640428 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
CNTN2-232ENST00000640428 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
CNTN2-232ENST00000640428 YTHDC1Q96MU7 727 aaKnown RBP17.34■□□□□ 0.37
CNTN2-232ENST00000640428 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
CNTN2-232ENST00000640428 SMARCA2P51531 1590 aa17.31■□□□□ 0.36
CNTN2-232ENST00000640428 EEA1Q15075 1411 aa17.3■□□□□ 0.36
CNTN2-232ENST00000640428 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
CNTN2-232ENST00000640428 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
CNTN2-232ENST00000640428 SOGA1O94964 1423 aa17.25■□□□□ 0.35
CNTN2-232ENST00000640428 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
CNTN2-232ENST00000640428 BICRAQ9NZM4 1560 aa17.2■□□□□ 0.34
CNTN2-232ENST00000640428 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
CNTN2-232ENST00000640428 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
CNTN2-232ENST00000640428 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
CNTN2-232ENST00000640428 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
CNTN2-232ENST00000640428 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
CNTN2-232ENST00000640428 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
CNTN2-232ENST00000640428 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
CNTN2-232ENST00000640428 ITGAEP38570 1179 aa17.14■□□□□ 0.33
CNTN2-232ENST00000640428 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
CNTN2-232ENST00000640428 GTF3C3Q9Y5Q9 886 aa17.09■□□□□ 0.33
CNTN2-232ENST00000640428 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
CNTN2-232ENST00000640428 CLIP1P30622 1438 aa17.09■□□□□ 0.33
CNTN2-232ENST00000640428 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
CNTN2-232ENST00000640428 KIF27Q86VH2 1401 aa17■□□□□ 0.31
CNTN2-232ENST00000640428 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
CNTN2-232ENST00000640428 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
CNTN2-232ENST00000640428 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
CNTN2-232ENST00000640428 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
CNTN2-232ENST00000640428 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
CNTN2-232ENST00000640428 MIER1Q8N108 512 aa16.88■□□□□ 0.29
CNTN2-232ENST00000640428 CUX2O14529 1486 aa16.85■□□□□ 0.29
CNTN2-232ENST00000640428 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
CNTN2-232ENST00000640428 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
CNTN2-232ENST00000640428 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
CNTN2-232ENST00000640428 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
CNTN2-232ENST00000640428 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
CNTN2-232ENST00000640428 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
CNTN2-232ENST00000640428 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
CNTN2-232ENST00000640428 CFTRP13569 1480 aa16.74■□□□□ 0.27
CNTN2-232ENST00000640428 FBLN2P98095 1184 aa16.69■□□□□ 0.26
CNTN2-232ENST00000640428 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
CNTN2-232ENST00000640428 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
CNTN2-232ENST00000640428 KANK4Q5T7N3 995 aaPredicted RBP16.66■□□□□ 0.26
CNTN2-232ENST00000640428 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
CNTN2-232ENST00000640428 KIF21BO75037 1637 aa16.64■□□□□ 0.25
CNTN2-232ENST00000640428 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
CNTN2-232ENST00000640428 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
CNTN2-232ENST00000640428 CUX1P39880 1505 aa16.62■□□□□ 0.25
CNTN2-232ENST00000640428 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
CNTN2-232ENST00000640428 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
CNTN2-232ENST00000640428 IGF1RP08069 1367 aa16.58■□□□□ 0.24
CNTN2-232ENST00000640428 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
CNTN2-232ENST00000640428 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
CNTN2-232ENST00000640428 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
CNTN2-232ENST00000640428 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
CNTN2-232ENST00000640428 NESP48681 1621 aa16.52■□□□□ 0.23
CNTN2-232ENST00000640428 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
CNTN2-232ENST00000640428 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
CNTN2-232ENST00000640428 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms