RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
TRIM6-212ENST00000621176 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
TRIM6-212ENST00000621176 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
TRIM6-212ENST00000621176 DDX10Q13206 875 aaKnown RBP12.56□□□□□ -0.4
TRIM6-212ENST00000621176 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
TRIM6-212ENST00000621176 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
TRIM6-212ENST00000621176 FGD5Q6ZNL6 1462 aa12.52□□□□□ -0.41
TRIM6-212ENST00000621176 HIRIP3Q9BW71 556 aaPredicted RBP12.51□□□□□ -0.41
TRIM6-212ENST00000621176 PPP1R15AO75807 674 aaPredicted RBP12.51□□□□□ -0.41
TRIM6-212ENST00000621176 BCANQ96GW7 911 aa12.51□□□□□ -0.41
TRIM6-212ENST00000621176 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
TRIM6-212ENST00000621176 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
TRIM6-212ENST00000621176 CADPSQ9ULU8 1353 aa12.5□□□□□ -0.41
TRIM6-212ENST00000621176 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
TRIM6-212ENST00000621176 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
TRIM6-212ENST00000621176 FKBP8Q14318 412 aa12.48□□□□□ -0.41
TRIM6-212ENST00000621176 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
TRIM6-212ENST00000621176 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.41
TRIM6-212ENST00000621176 FHOD3Q2V2M9 1422 aa12.46□□□□□ -0.41
TRIM6-212ENST00000621176 TRIM52Q96A61 297 aa12.43□□□□□ -0.42
TRIM6-212ENST00000621176 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
TRIM6-212ENST00000621176 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
TRIM6-212ENST00000621176 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
TRIM6-212ENST00000621176 RAD54L2Q9Y4B4 1467 aa12.4□□□□□ -0.42
TRIM6-212ENST00000621176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRIM6-212ENST00000621176 ANP32CO43423 234 aa12.4□□□□□ -0.43
TRIM6-212ENST00000621176 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.43
TRIM6-212ENST00000621176 FGD6Q6ZV73 1430 aa12.37□□□□□ -0.43
TRIM6-212ENST00000621176 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
TRIM6-212ENST00000621176 PTPRKQ15262 1439 aa12.37□□□□□ -0.43
TRIM6-212ENST00000621176 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
TRIM6-212ENST00000621176 AQRO60306 1485 aaKnown RBP eCLIP12.36□□□□□ -0.439e-8■■□□□ 11.9
TRIM6-212ENST00000621176 EFCAB5A4FU69 1503 aa12.36□□□□□ -0.43
TRIM6-212ENST00000621176 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
TRIM6-212ENST00000621176 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
TRIM6-212ENST00000621176 NEFLP07196 543 aa12.35□□□□□ -0.43
TRIM6-212ENST00000621176 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
TRIM6-212ENST00000621176 HFM1A2PYH4 1435 aa12.33□□□□□ -0.44
TRIM6-212ENST00000621176 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
TRIM6-212ENST00000621176 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
TRIM6-212ENST00000621176 RBM19Q9Y4C8 960 aaKnown RBP12.32□□□□□ -0.44
TRIM6-212ENST00000621176 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
TRIM6-212ENST00000621176 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
TRIM6-212ENST00000621176 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
TRIM6-212ENST00000621176 TOPBP1Q92547 1522 aa12.31□□□□□ -0.44
TRIM6-212ENST00000621176 PTPN23Q9H3S7 1636 aa12.31□□□□□ -0.44
TRIM6-212ENST00000621176 NAIPQ13075 1403 aa12.3□□□□□ -0.44
TRIM6-212ENST00000621176 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
TRIM6-212ENST00000621176 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
TRIM6-212ENST00000621176 CUL7Q14999 1698 aa12.28□□□□□ -0.44
TRIM6-212ENST00000621176 KDM5BQ9UGL1 1544 aa12.28□□□□□ -0.44
TRIM6-212ENST00000621176 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
TRIM6-212ENST00000621176 NESP48681 1621 aa12.27□□□□□ -0.44
TRIM6-212ENST00000621176 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.45
TRIM6-212ENST00000621176 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
TRIM6-212ENST00000621176 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM6-212ENST00000621176 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
TRIM6-212ENST00000621176 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
TRIM6-212ENST00000621176 WASHC2AQ641Q2 1341 aa12.24□□□□□ -0.45
TRIM6-212ENST00000621176 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
TRIM6-212ENST00000621176 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
TRIM6-212ENST00000621176 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
TRIM6-212ENST00000621176 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
TRIM6-212ENST00000621176 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
TRIM6-212ENST00000621176 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
TRIM6-212ENST00000621176 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
TRIM6-212ENST00000621176 MAGI3Q5TCQ9 1506 aa12.2□□□□□ -0.46
TRIM6-212ENST00000621176 URB2Q14146 1524 aaKnown RBP12.2□□□□□ -0.46
TRIM6-212ENST00000621176 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
TRIM6-212ENST00000621176 MSH5O43196 834 aa12.19□□□□□ -0.46
TRIM6-212ENST00000621176 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
TRIM6-212ENST00000621176 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
TRIM6-212ENST00000621176 ARHGEF11O15085 1522 aa12.18□□□□□ -0.46
TRIM6-212ENST00000621176 THOC2Q8NI27 1593 aaKnown RBP12.17□□□□□ -0.46
TRIM6-212ENST00000621176 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
TRIM6-212ENST00000621176 KDM6BO15054 1643 aa12.17□□□□□ -0.46
TRIM6-212ENST00000621176 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
TRIM6-212ENST00000621176 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
TRIM6-212ENST00000621176 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRIM6-212ENST00000621176 FOXD1Q16676 465 aa12.15□□□□□ -0.46
TRIM6-212ENST00000621176 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
TRIM6-212ENST00000621176 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
TRIM6-212ENST00000621176 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
TRIM6-212ENST00000621176 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
TRIM6-212ENST00000621176 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
TRIM6-212ENST00000621176 GCC2Q8IWJ2 1684 aa12.13□□□□□ -0.47
TRIM6-212ENST00000621176 CDK11AQ9UQ88 783 aaPredicted RBP12.12□□□□□ -0.47
TRIM6-212ENST00000621176 PRKRIP1Q9H875 184 aaPredicted RBP12.12□□□□□ -0.47
TRIM6-212ENST00000621176 ARID3CA6NKF2 412 aa12.11□□□□□ -0.47
TRIM6-212ENST00000621176 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
TRIM6-212ENST00000621176 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
TRIM6-212ENST00000621176 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
TRIM6-212ENST00000621176 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
TRIM6-212ENST00000621176 CCDC7Q96M83 1385 aa12.1□□□□□ -0.47
TRIM6-212ENST00000621176 FANCIQ9NVI1 1328 aa12.1□□□□□ -0.47
TRIM6-212ENST00000621176 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
TRIM6-212ENST00000621176 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
TRIM6-212ENST00000621176 EPRSP07814 1512 aaKnown RBP12.09□□□□□ -0.47
TRIM6-212ENST00000621176 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
TRIM6-212ENST00000621176 MRS2Q9HD23 443 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms