RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-215ENST00000592410 TRIM41Q8WV44 630 aa9.34□□□□□ -0.91
ERCC1-215ENST00000592410 NCAPD3P42695 1498 aa9.33□□□□□ -0.92
ERCC1-215ENST00000592410 PRR29P0C7W0 189 aa9.29□□□□□ -0.92
ERCC1-215ENST00000592410 EVX2Q03828 476 aa9.29□□□□□ -0.92
ERCC1-215ENST00000592410 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
ERCC1-215ENST00000592410 C19orf67A6NJJ6 358 aa9.24□□□□□ -0.93
ERCC1-215ENST00000592410 CC2D2AQ9P2K1 1620 aa9.21□□□□□ -0.93
ERCC1-215ENST00000592410 ABCC8Q09428 1581 aa9.2□□□□□ -0.94
ERCC1-215ENST00000592410 PRDM2Q13029 1718 aa9.19□□□□□ -0.94
ERCC1-215ENST00000592410 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
ERCC1-215ENST00000592410 EEA1Q15075 1411 aa9.16□□□□□ -0.94
ERCC1-215ENST00000592410 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
ERCC1-215ENST00000592410 CFTRP13569 1480 aa9.14□□□□□ -0.95
ERCC1-215ENST00000592410 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
ERCC1-215ENST00000592410 STAG3Q9UJ98 1225 aa9.12□□□□□ -0.95
ERCC1-215ENST00000592410 BIVM-ERCC5R4GMW8 1640 aa9.12□□□□□ -0.95
ERCC1-215ENST00000592410 TOP2BQ02880 1626 aa9.11□□□□□ -0.95
ERCC1-215ENST00000592410 LOC105371045A0A1W2PR82 267 aa9.1□□□□□ -0.95
ERCC1-215ENST00000592410 GABBR2O75899 941 aa9.1□□□□□ -0.95
ERCC1-215ENST00000592410 FAM9AQ8IZU1 332 aaPredicted RBP9.1□□□□□ -0.95
ERCC1-215ENST00000592410 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
ERCC1-215ENST00000592410 CADPSQ9ULU8 1353 aa9.08□□□□□ -0.96
ERCC1-215ENST00000592410 CD44P16070 742 aaKnown RBP9.07□□□□□ -0.96
ERCC1-215ENST00000592410 CREBZFQ9NS37 354 aa9.05□□□□□ -0.96
ERCC1-215ENST00000592410 LAMC3Q9Y6N6 1575 aa9.04□□□□□ -0.96
ERCC1-215ENST00000592410 SOGA1O94964 1423 aa9.03□□□□□ -0.96
ERCC1-215ENST00000592410 KIF21BO75037 1637 aa9.01□□□□□ -0.97
ERCC1-215ENST00000592410 GOLGA3Q08378 1498 aa9.01□□□□□ -0.97
ERCC1-215ENST00000592410 CUX1P39880 1505 aa9□□□□□ -0.97
ERCC1-215ENST00000592410 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
ERCC1-215ENST00000592410 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
ERCC1-215ENST00000592410 CLCN6P51797 869 aa8.98□□□□□ -0.97
ERCC1-215ENST00000592410 TNIKQ9UKE5 1360 aa8.98□□□□□ -0.97
ERCC1-215ENST00000592410 RUSC2Q8N2Y8 1516 aa8.97□□□□□ -0.97
ERCC1-215ENST00000592410 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
ERCC1-215ENST00000592410 DNMBPQ6XZF7 1577 aa8.95□□□□□ -0.98
ERCC1-215ENST00000592410 PDS5BQ9NTI5 1447 aa8.95□□□□□ -0.98
ERCC1-215ENST00000592410 PROM2Q8N271 834 aa8.94□□□□□ -0.98
ERCC1-215ENST00000592410 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
ERCC1-215ENST00000592410 ERICH3Q5RHP9 1530 aa8.94□□□□□ -0.98
ERCC1-215ENST00000592410 UBTFP17480 764 aaKnown RBP8.93□□□□□ -0.98
ERCC1-215ENST00000592410 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
ERCC1-215ENST00000592410 FGD5Q6ZNL6 1462 aa8.91□□□□□ -0.98
ERCC1-215ENST00000592410 CEP162Q5TB80 1403 aa8.91□□□□□ -0.98
ERCC1-215ENST00000592410 NESP48681 1621 aa8.91□□□□□ -0.98
ERCC1-215ENST00000592410 NPM1P06748 294 aaKnown RBP eCLIP8.9□□□□□ -0.98
ERCC1-215ENST00000592410 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
ERCC1-215ENST00000592410 TOPBP1Q92547 1522 aa8.9□□□□□ -0.99
ERCC1-215ENST00000592410 MNX1P50219 401 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-215ENST00000592410 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-215ENST00000592410 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
ERCC1-215ENST00000592410 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
ERCC1-215ENST00000592410 CUX2O14529 1486 aa8.88□□□□□ -0.99
ERCC1-215ENST00000592410 PAK3O75914 559 aaPredicted RBP8.87□□□□□ -0.99
ERCC1-215ENST00000592410 LHX8Q68G74 356 aa8.87□□□□□ -0.99
ERCC1-215ENST00000592410 RAPGEF2Q9Y4G8 1499 aa8.86□□□□□ -0.99
ERCC1-215ENST00000592410 ABCA10Q8WWZ4 1543 aa8.85□□□□□ -0.99
ERCC1-215ENST00000592410 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
ERCC1-215ENST00000592410 DCBLD2Q96PD2 775 aa8.85□□□□□ -0.99
ERCC1-215ENST00000592410 PCGF6Q9BYE7 350 aa8.85□□□□□ -0.99
ERCC1-215ENST00000592410 CUL7Q14999 1698 aa8.84□□□□□ -0.99
ERCC1-215ENST00000592410 WDR97A6NE52 1622 aa8.83□□□□□ -1
ERCC1-215ENST00000592410 CLIP1P30622 1438 aa8.83□□□□□ -1
ERCC1-215ENST00000592410 URB2Q14146 1524 aaKnown RBP8.83□□□□□ -1
ERCC1-215ENST00000592410 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
ERCC1-215ENST00000592410 GALR2O43603 387 aaPredicted RBP8.81□□□□□ -1
ERCC1-215ENST00000592410 PHF12Q96QT6 1004 aa8.81□□□□□ -1
ERCC1-215ENST00000592410 IGF1RP08069 1367 aa8.8□□□□□ -1
ERCC1-215ENST00000592410 CARMIL1Q5VZK9 1371 aa8.79□□□□□ -1
ERCC1-215ENST00000592410 RAD54L2Q9Y4B4 1467 aa8.78□□□□□ -1
ERCC1-215ENST00000592410 ABCA5Q8WWZ7 1642 aa8.78□□□□□ -1
ERCC1-215ENST00000592410 VPS8Q8N3P4 1428 aa8.78□□□□□ -1
ERCC1-215ENST00000592410 TARBP1Q13395 1621 aaKnown RBP8.76□□□□□ -1.01
ERCC1-215ENST00000592410 WDR62O43379 1518 aa8.76□□□□□ -1.01
ERCC1-215ENST00000592410 CTTNBP2Q8WZ74 1663 aa8.75□□□□□ -1.01
ERCC1-215ENST00000592410 ERCC6Q03468 1493 aa8.75□□□□□ -1.01
ERCC1-215ENST00000592410 GAPVD1Q14C86 1478 aa8.75□□□□□ -1.01
ERCC1-215ENST00000592410 PBRM1Q86U86 1689 aa8.74□□□□□ -1.01
ERCC1-215ENST00000592410 IFT140Q96RY7 1462 aa8.73□□□□□ -1.01
ERCC1-215ENST00000592410 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
ERCC1-215ENST00000592410 MIER1Q8N108 512 aa8.73□□□□□ -1.01
ERCC1-215ENST00000592410 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
ERCC1-215ENST00000592410 EFCAB5A4FU69 1503 aa8.71□□□□□ -1.01
ERCC1-215ENST00000592410 HRCP23327 699 aa8.71□□□□□ -1.02
ERCC1-215ENST00000592410 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
ERCC1-215ENST00000592410 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
ERCC1-215ENST00000592410 THOC2Q8NI27 1593 aaKnown RBP8.69□□□□□ -1.02
ERCC1-215ENST00000592410 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
ERCC1-215ENST00000592410 TDRD9Q8NDG6 1382 aaKnown RBP8.69□□□□□ -1.02
ERCC1-215ENST00000592410 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
ERCC1-215ENST00000592410 FHAD1B1AJZ9 1412 aa8.68□□□□□ -1.02
ERCC1-215ENST00000592410 GRIN2BQ13224 1484 aa8.68□□□□□ -1.02
ERCC1-215ENST00000592410 ZEB1P37275 1124 aaPredicted RBP8.67□□□□□ -1.02
ERCC1-215ENST00000592410 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
ERCC1-215ENST00000592410 FKBP8Q14318 412 aa8.67□□□□□ -1.02
ERCC1-215ENST00000592410 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
ERCC1-215ENST00000592410 PLCD3Q8N3E9 789 aa8.66□□□□□ -1.02
ERCC1-215ENST00000592410 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
ERCC1-215ENST00000592410 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
ERCC1-215ENST00000592410 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms