RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-215ENST00000592410 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-215ENST00000592410 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
ERCC1-215ENST00000592410 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-215ENST00000592410 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
ERCC1-215ENST00000592410 FOXD1Q16676 465 aa14.07□□□□□ -0.16
ERCC1-215ENST00000592410 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
ERCC1-215ENST00000592410 MSH5O43196 834 aa13.19□□□□□ -0.3
ERCC1-215ENST00000592410 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
ERCC1-215ENST00000592410 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
ERCC1-215ENST00000592410 ADRA2BP18089 450 aa13.11□□□□□ -0.31
ERCC1-215ENST00000592410 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
ERCC1-215ENST00000592410 NISCHQ9Y2I1 1504 aa12.52□□□□□ -0.41
ERCC1-215ENST00000592410 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
ERCC1-215ENST00000592410 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
ERCC1-215ENST00000592410 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
ERCC1-215ENST00000592410 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
ERCC1-215ENST00000592410 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
ERCC1-215ENST00000592410 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
ERCC1-215ENST00000592410 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
ERCC1-215ENST00000592410 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
ERCC1-215ENST00000592410 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
ERCC1-215ENST00000592410 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
ERCC1-215ENST00000592410 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
ERCC1-215ENST00000592410 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
ERCC1-215ENST00000592410 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
ERCC1-215ENST00000592410 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
ERCC1-215ENST00000592410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.655e-7■■□□□ 12.5
ERCC1-215ENST00000592410 CCDC180Q9P1Z9 1646 aa10.95□□□□□ -0.66
ERCC1-215ENST00000592410 KCNA4P22459 653 aa10.91□□□□□ -0.66
ERCC1-215ENST00000592410 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
ERCC1-215ENST00000592410 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
ERCC1-215ENST00000592410 SPINK5Q9NQ38 1064 aaPredicted RBP10.59□□□□□ -0.71
ERCC1-215ENST00000592410 CAPN15O75808 1086 aa10.58□□□□□ -0.72
ERCC1-215ENST00000592410 DSG3P32926 999 aa10.53□□□□□ -0.72
ERCC1-215ENST00000592410 ZCCHC6Q5VYS8 1495 aaKnown RBP10.53□□□□□ -0.72
ERCC1-215ENST00000592410 APLP2Q06481 763 aa10.47□□□□□ -0.73
ERCC1-215ENST00000592410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.46□□□□□ -0.73
ERCC1-215ENST00000592410 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.73
ERCC1-215ENST00000592410 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
ERCC1-215ENST00000592410 DCAF1Q9Y4B6 1507 aa10.4□□□□□ -0.74
ERCC1-215ENST00000592410 SAMD1Q6SPF0 538 aaPredicted RBP10.4□□□□□ -0.74
ERCC1-215ENST00000592410 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.74
ERCC1-215ENST00000592410 ABCB7O75027 752 aa10.33□□□□□ -0.76
ERCC1-215ENST00000592410 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
ERCC1-215ENST00000592410 SLC4A1APQ9BWU0 796 aaKnown RBP10.31□□□□□ -0.76
ERCC1-215ENST00000592410 MYO15BQ96JP2 1530 aa10.25□□□□□ -0.77
ERCC1-215ENST00000592410 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
ERCC1-215ENST00000592410 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
ERCC1-215ENST00000592410 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
ERCC1-215ENST00000592410 NACADO15069 1562 aa10.15□□□□□ -0.78
ERCC1-215ENST00000592410 ABCC9O60706 1549 aa10.14□□□□□ -0.79
ERCC1-215ENST00000592410 POLA2Q14181 598 aa10.13□□□□□ -0.79
ERCC1-215ENST00000592410 POTEHQ6S545 545 aa10.09□□□□□ -0.79
ERCC1-215ENST00000592410 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
ERCC1-215ENST00000592410 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
ERCC1-215ENST00000592410 RB1CC1Q8TDY2 1594 aa10.04□□□□□ -0.8
ERCC1-215ENST00000592410 ZBTB22O15209 634 aa10.03□□□□□ -0.8
ERCC1-215ENST00000592410 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
ERCC1-215ENST00000592410 ZBTB12Q9Y330 459 aaPredicted RBP9.94□□□□□ -0.82
ERCC1-215ENST00000592410 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
ERCC1-215ENST00000592410 SUPT5HO00267 1087 aaKnown RBP9.88□□□□□ -0.83
ERCC1-215ENST00000592410 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
ERCC1-215ENST00000592410 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
ERCC1-215ENST00000592410 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
ERCC1-215ENST00000592410 OSCARQ8IYS5 282 aa9.8□□□□□ -0.84
ERCC1-215ENST00000592410 REM2Q8IYK8 340 aaPredicted RBP9.72□□□□□ -0.85
ERCC1-215ENST00000592410 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.86
ERCC1-215ENST00000592410 FBLN2P98095 1184 aa9.69□□□□□ -0.86
ERCC1-215ENST00000592410 BAZ1AQ9NRL2 1556 aaPredicted RBP9.69□□□□□ -0.86
ERCC1-215ENST00000592410 BICRAQ9NZM4 1560 aa9.66□□□□□ -0.86
ERCC1-215ENST00000592410 CECR2Q9BXF3 1484 aa9.64□□□□□ -0.87
ERCC1-215ENST00000592410 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
ERCC1-215ENST00000592410 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
ERCC1-215ENST00000592410 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
ERCC1-215ENST00000592410 MROH2BQ7Z745 1585 aa9.63□□□□□ -0.87
ERCC1-215ENST00000592410 PITPNM1O00562 1244 aa9.62□□□□□ -0.87
ERCC1-215ENST00000592410 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
ERCC1-215ENST00000592410 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
ERCC1-215ENST00000592410 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
ERCC1-215ENST00000592410 WIZO95785 1651 aa9.58□□□□□ -0.88
ERCC1-215ENST00000592410 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
ERCC1-215ENST00000592410 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
ERCC1-215ENST00000592410 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
ERCC1-215ENST00000592410 TOP2AP11388 1531 aaKnown RBP9.52□□□□□ -0.88
ERCC1-215ENST00000592410 PEG3Q9GZU2 1588 aa9.5□□□□□ -0.89
ERCC1-215ENST00000592410 ZNF692Q9BU19 519 aaPredicted RBP9.5□□□□□ -0.89
ERCC1-215ENST00000592410 SSUH2Q9Y2M2 353 aa9.49□□□□□ -0.89
ERCC1-215ENST00000592410 SMARCA2P51531 1590 aa9.46□□□□□ -0.89
ERCC1-215ENST00000592410 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
ERCC1-215ENST00000592410 SP7Q8TDD2 431 aaPredicted RBP9.46□□□□□ -0.9
ERCC1-215ENST00000592410 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
ERCC1-215ENST00000592410 HAX1O00165 279 aa9.42□□□□□ -0.9
ERCC1-215ENST00000592410 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
ERCC1-215ENST00000592410 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.91
ERCC1-215ENST00000592410 EIF4G1Q04637 1599 aaKnown RBP9.39□□□□□ -0.91
ERCC1-215ENST00000592410 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
ERCC1-215ENST00000592410 DNAJC5Q9H3Z4 198 aa9.38□□□□□ -0.91
ERCC1-215ENST00000592410 CCDC88BA6NC98 1476 aa9.38□□□□□ -0.91
ERCC1-215ENST00000592410 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
ERCC1-215ENST00000592410 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms