RNA–Protein interactions for RNA: ENST00000495550.5

DENND1B-209, Transcript of DENN domain containing 1B, humanhuman

TSL 3

Gene DENND1B, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-209ENST00000495550 WRNQ14191 1432 aaPredicted RBP eCLIP12.3□□□□□ -0.44
DENND1B-209ENST00000495550 NESP48681 1621 aa12.29□□□□□ -0.44
DENND1B-209ENST00000495550 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
DENND1B-209ENST00000495550 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
DENND1B-209ENST00000495550 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.44
DENND1B-209ENST00000495550 TOP2BQ02880 1626 aa12.27□□□□□ -0.44
DENND1B-209ENST00000495550 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
DENND1B-209ENST00000495550 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
DENND1B-209ENST00000495550 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
DENND1B-209ENST00000495550 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
DENND1B-209ENST00000495550 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
DENND1B-209ENST00000495550 CUX1P39880 1505 aa12.21□□□□□ -0.45
DENND1B-209ENST00000495550 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
DENND1B-209ENST00000495550 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
DENND1B-209ENST00000495550 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
DENND1B-209ENST00000495550 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
DENND1B-209ENST00000495550 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
DENND1B-209ENST00000495550 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
DENND1B-209ENST00000495550 WDR62O43379 1518 aa12.15□□□□□ -0.46
DENND1B-209ENST00000495550 URB2Q14146 1524 aaKnown RBP12.15□□□□□ -0.46
DENND1B-209ENST00000495550 EEA1Q15075 1411 aa12.14□□□□□ -0.47
DENND1B-209ENST00000495550 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
DENND1B-209ENST00000495550 THOC2Q8NI27 1593 aaKnown RBP12.13□□□□□ -0.47
DENND1B-209ENST00000495550 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
DENND1B-209ENST00000495550 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.47
DENND1B-209ENST00000495550 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
DENND1B-209ENST00000495550 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
DENND1B-209ENST00000495550 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
DENND1B-209ENST00000495550 SOGA1O94964 1423 aa12.03□□□□□ -0.48
DENND1B-209ENST00000495550 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
DENND1B-209ENST00000495550 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
DENND1B-209ENST00000495550 IFT140Q96RY7 1462 aa12.02□□□□□ -0.48
DENND1B-209ENST00000495550 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
DENND1B-209ENST00000495550 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
DENND1B-209ENST00000495550 CUX2O14529 1486 aa12□□□□□ -0.49
DENND1B-209ENST00000495550 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
DENND1B-209ENST00000495550 RAD54L2Q9Y4B4 1467 aa11.97□□□□□ -0.49
DENND1B-209ENST00000495550 KIF21BO75037 1637 aa11.96□□□□□ -0.5
DENND1B-209ENST00000495550 ERICH3Q5RHP9 1530 aa11.95□□□□□ -0.5
DENND1B-209ENST00000495550 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
DENND1B-209ENST00000495550 HAX1O00165 279 aa11.94□□□□□ -0.5
DENND1B-209ENST00000495550 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
DENND1B-209ENST00000495550 CUL7Q14999 1698 aa11.93□□□□□ -0.5
DENND1B-209ENST00000495550 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
DENND1B-209ENST00000495550 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
DENND1B-209ENST00000495550 CHADLQ6NUI6 762 aa11.9□□□□□ -0.5
DENND1B-209ENST00000495550 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
DENND1B-209ENST00000495550 IGF1RP08069 1367 aa11.9□□□□□ -0.5
DENND1B-209ENST00000495550 GOLGA3Q08378 1498 aa11.89□□□□□ -0.51
DENND1B-209ENST00000495550 PROM2Q8N271 834 aa11.88□□□□□ -0.51
DENND1B-209ENST00000495550 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
DENND1B-209ENST00000495550 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
DENND1B-209ENST00000495550 FAM9AQ8IZU1 332 aaPredicted RBP11.86□□□□□ -0.51
DENND1B-209ENST00000495550 TDRD9Q8NDG6 1382 aaKnown RBP11.85□□□□□ -0.51
DENND1B-209ENST00000495550 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
DENND1B-209ENST00000495550 CARMIL1Q5VZK9 1371 aa11.84□□□□□ -0.51
DENND1B-209ENST00000495550 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
DENND1B-209ENST00000495550 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
DENND1B-209ENST00000495550 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
DENND1B-209ENST00000495550 TNIKQ9UKE5 1360 aa11.82□□□□□ -0.52
DENND1B-209ENST00000495550 EVX2Q03828 476 aa11.82□□□□□ -0.52
DENND1B-209ENST00000495550 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
DENND1B-209ENST00000495550 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
DENND1B-209ENST00000495550 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
DENND1B-209ENST00000495550 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
DENND1B-209ENST00000495550 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
DENND1B-209ENST00000495550 FKBP8Q14318 412 aa11.77□□□□□ -0.53
DENND1B-209ENST00000495550 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
DENND1B-209ENST00000495550 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
DENND1B-209ENST00000495550 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
DENND1B-209ENST00000495550 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
DENND1B-209ENST00000495550 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
DENND1B-209ENST00000495550 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
DENND1B-209ENST00000495550 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
DENND1B-209ENST00000495550 NUP160Q12769 1436 aa11.67□□□□□ -0.54
DENND1B-209ENST00000495550 EFCAB5A4FU69 1503 aa11.66□□□□□ -0.54
DENND1B-209ENST00000495550 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
DENND1B-209ENST00000495550 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
DENND1B-209ENST00000495550 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
DENND1B-209ENST00000495550 IQGAP2Q13576 1575 aa11.64□□□□□ -0.55
DENND1B-209ENST00000495550 CLIP1P30622 1438 aa11.64□□□□□ -0.55
DENND1B-209ENST00000495550 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
DENND1B-209ENST00000495550 CHD1O14646 1710 aa11.63□□□□□ -0.55
DENND1B-209ENST00000495550 UGGT2Q9NYU1 1516 aa11.62□□□□□ -0.55
DENND1B-209ENST00000495550 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
DENND1B-209ENST00000495550 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
DENND1B-209ENST00000495550 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
DENND1B-209ENST00000495550 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
DENND1B-209ENST00000495550 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
DENND1B-209ENST00000495550 MIER1Q8N108 512 aa11.59□□□□□ -0.55
DENND1B-209ENST00000495550 SHROOM2Q13796 1616 aa11.56□□□□□ -0.56
DENND1B-209ENST00000495550 VPS8Q8N3P4 1428 aa11.55□□□□□ -0.56
DENND1B-209ENST00000495550 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
DENND1B-209ENST00000495550 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
DENND1B-209ENST00000495550 GABBR2O75899 941 aa11.54□□□□□ -0.56
DENND1B-209ENST00000495550 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
DENND1B-209ENST00000495550 CLCN6P51797 869 aa11.54□□□□□ -0.56
DENND1B-209ENST00000495550 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
DENND1B-209ENST00000495550 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
DENND1B-209ENST00000495550 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms