RNA–Protein interactions for RNA: ENST00000495550.5

DENND1B-209, Transcript of DENN domain containing 1B, humanhuman

TSL 3

Gene DENND1B, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-209ENST00000495550 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
DENND1B-209ENST00000495550 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
DENND1B-209ENST00000495550 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
DENND1B-209ENST00000495550 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
DENND1B-209ENST00000495550 FOXD1Q16676 465 aa17.94■□□□□ 0.46
DENND1B-209ENST00000495550 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
DENND1B-209ENST00000495550 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
DENND1B-209ENST00000495550 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
DENND1B-209ENST00000495550 ADRA2BP18089 450 aa16.9■□□□□ 0.3
DENND1B-209ENST00000495550 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
DENND1B-209ENST00000495550 MSH5O43196 834 aa16.74■□□□□ 0.27
DENND1B-209ENST00000495550 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
DENND1B-209ENST00000495550 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
DENND1B-209ENST00000495550 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
DENND1B-209ENST00000495550 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
DENND1B-209ENST00000495550 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
DENND1B-209ENST00000495550 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
DENND1B-209ENST00000495550 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
DENND1B-209ENST00000495550 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
DENND1B-209ENST00000495550 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
DENND1B-209ENST00000495550 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
DENND1B-209ENST00000495550 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
DENND1B-209ENST00000495550 NPM3O75607 178 aaKnown RBP14.61□□□□□ -0.07
DENND1B-209ENST00000495550 KCNA4P22459 653 aa14.55□□□□□ -0.08
DENND1B-209ENST00000495550 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
DENND1B-209ENST00000495550 RNF39Q9H2S5 420 aa14.3□□□□□ -0.12
DENND1B-209ENST00000495550 CACNB1Q02641 598 aaPredicted RBP14.27□□□□□ -0.13
DENND1B-209ENST00000495550 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
DENND1B-209ENST00000495550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
DENND1B-209ENST00000495550 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
DENND1B-209ENST00000495550 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
DENND1B-209ENST00000495550 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
DENND1B-209ENST00000495550 ABCC9O60706 1549 aa14.08□□□□□ -0.16
DENND1B-209ENST00000495550 NACADO15069 1562 aa13.97□□□□□ -0.17
DENND1B-209ENST00000495550 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
DENND1B-209ENST00000495550 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
DENND1B-209ENST00000495550 RB1CC1Q8TDY2 1594 aa13.86□□□□□ -0.19
DENND1B-209ENST00000495550 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
DENND1B-209ENST00000495550 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
DENND1B-209ENST00000495550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
DENND1B-209ENST00000495550 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
DENND1B-209ENST00000495550 APLP2Q06481 763 aa13.62□□□□□ -0.23
DENND1B-209ENST00000495550 CAPN15O75808 1086 aa13.6□□□□□ -0.23
DENND1B-209ENST00000495550 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
DENND1B-209ENST00000495550 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
DENND1B-209ENST00000495550 SCRIBQ14160 1630 aa13.56□□□□□ -0.24
DENND1B-209ENST00000495550 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
DENND1B-209ENST00000495550 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
DENND1B-209ENST00000495550 UNC13AQ9UPW8 1703 aa13.52□□□□□ -0.25
DENND1B-209ENST00000495550 SHROOM4Q9ULL8 1493 aa13.47□□□□□ -0.25
DENND1B-209ENST00000495550 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
DENND1B-209ENST00000495550 DSG3P32926 999 aa13.44□□□□□ -0.26
DENND1B-209ENST00000495550 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
DENND1B-209ENST00000495550 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
DENND1B-209ENST00000495550 ZBTB22O15209 634 aa13.34□□□□□ -0.27
DENND1B-209ENST00000495550 ABCB7O75027 752 aa13.26□□□□□ -0.29
DENND1B-209ENST00000495550 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
DENND1B-209ENST00000495550 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
DENND1B-209ENST00000495550 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
DENND1B-209ENST00000495550 POLA2Q14181 598 aa13.14□□□□□ -0.31
DENND1B-209ENST00000495550 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
DENND1B-209ENST00000495550 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
DENND1B-209ENST00000495550 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
DENND1B-209ENST00000495550 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
DENND1B-209ENST00000495550 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
DENND1B-209ENST00000495550 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
DENND1B-209ENST00000495550 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
DENND1B-209ENST00000495550 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
DENND1B-209ENST00000495550 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
DENND1B-209ENST00000495550 SMARCA2P51531 1590 aa12.94□□□□□ -0.34
DENND1B-209ENST00000495550 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
DENND1B-209ENST00000495550 WIZO95785 1651 aa12.91□□□□□ -0.34
DENND1B-209ENST00000495550 SUPT5HO00267 1087 aaKnown RBP12.9□□□□□ -0.34
DENND1B-209ENST00000495550 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
DENND1B-209ENST00000495550 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
DENND1B-209ENST00000495550 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
DENND1B-209ENST00000495550 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
DENND1B-209ENST00000495550 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
DENND1B-209ENST00000495550 CC2D2AQ9P2K1 1620 aa12.83□□□□□ -0.36
DENND1B-209ENST00000495550 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
DENND1B-209ENST00000495550 FBLN2P98095 1184 aa12.72□□□□□ -0.37
DENND1B-209ENST00000495550 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
DENND1B-209ENST00000495550 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
DENND1B-209ENST00000495550 POTEHQ6S545 545 aa12.66□□□□□ -0.38
DENND1B-209ENST00000495550 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
DENND1B-209ENST00000495550 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
DENND1B-209ENST00000495550 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
DENND1B-209ENST00000495550 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
DENND1B-209ENST00000495550 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
DENND1B-209ENST00000495550 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
DENND1B-209ENST00000495550 CFTRP13569 1480 aa12.51□□□□□ -0.41
DENND1B-209ENST00000495550 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
DENND1B-209ENST00000495550 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
DENND1B-209ENST00000495550 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
DENND1B-209ENST00000495550 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
DENND1B-209ENST00000495550 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
DENND1B-209ENST00000495550 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
DENND1B-209ENST00000495550 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
DENND1B-209ENST00000495550 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
DENND1B-209ENST00000495550 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms