RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-223ENST00000494727 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
ACSS2-223ENST00000494727 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
ACSS2-223ENST00000494727 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
ACSS2-223ENST00000494727 CHD1O14646 1710 aa17.26■□□□□ 0.35
ACSS2-223ENST00000494727 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
ACSS2-223ENST00000494727 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
ACSS2-223ENST00000494727 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
ACSS2-223ENST00000494727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
ACSS2-223ENST00000494727 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
ACSS2-223ENST00000494727 PBRM1Q86U86 1689 aa17.22■□□□□ 0.35
ACSS2-223ENST00000494727 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
ACSS2-223ENST00000494727 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
ACSS2-223ENST00000494727 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
ACSS2-223ENST00000494727 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
ACSS2-223ENST00000494727 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
ACSS2-223ENST00000494727 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
ACSS2-223ENST00000494727 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
ACSS2-223ENST00000494727 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
ACSS2-223ENST00000494727 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
ACSS2-223ENST00000494727 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
ACSS2-223ENST00000494727 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
ACSS2-223ENST00000494727 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
ACSS2-223ENST00000494727 APLP2Q06481 763 aa17.04■□□□□ 0.32
ACSS2-223ENST00000494727 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
ACSS2-223ENST00000494727 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
ACSS2-223ENST00000494727 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
ACSS2-223ENST00000494727 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
ACSS2-223ENST00000494727 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
ACSS2-223ENST00000494727 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
ACSS2-223ENST00000494727 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
ACSS2-223ENST00000494727 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
ACSS2-223ENST00000494727 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
ACSS2-223ENST00000494727 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
ACSS2-223ENST00000494727 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
ACSS2-223ENST00000494727 NUP160Q12769 1436 aa16.92■□□□□ 0.3
ACSS2-223ENST00000494727 CAPN15O75808 1086 aa16.91■□□□□ 0.3
ACSS2-223ENST00000494727 IGF1RP08069 1367 aa16.89■□□□□ 0.3
ACSS2-223ENST00000494727 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
ACSS2-223ENST00000494727 CUL7Q14999 1698 aa16.87■□□□□ 0.29
ACSS2-223ENST00000494727 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
ACSS2-223ENST00000494727 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
ACSS2-223ENST00000494727 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
ACSS2-223ENST00000494727 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
ACSS2-223ENST00000494727 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
ACSS2-223ENST00000494727 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
ACSS2-223ENST00000494727 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
ACSS2-223ENST00000494727 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
ACSS2-223ENST00000494727 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
ACSS2-223ENST00000494727 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
ACSS2-223ENST00000494727 DSG3P32926 999 aa16.66■□□□□ 0.26
ACSS2-223ENST00000494727 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
ACSS2-223ENST00000494727 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
ACSS2-223ENST00000494727 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
ACSS2-223ENST00000494727 ABCB7O75027 752 aa16.59■□□□□ 0.25
ACSS2-223ENST00000494727 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
ACSS2-223ENST00000494727 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
ACSS2-223ENST00000494727 POLA2Q14181 598 aa16.55■□□□□ 0.24
ACSS2-223ENST00000494727 PTPRGP23470 1445 aa16.54■□□□□ 0.24
ACSS2-223ENST00000494727 DISP1Q96F81 1524 aa16.54■□□□□ 0.24
ACSS2-223ENST00000494727 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
ACSS2-223ENST00000494727 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
ACSS2-223ENST00000494727 EEA1Q15075 1411 aa16.53■□□□□ 0.24
ACSS2-223ENST00000494727 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.24
ACSS2-223ENST00000494727 KIAA0556O60303 1618 aa16.52■□□□□ 0.23
ACSS2-223ENST00000494727 NPM1P06748 294 aaKnown RBP eCLIP16.49■□□□□ 0.23
ACSS2-223ENST00000494727 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
ACSS2-223ENST00000494727 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
ACSS2-223ENST00000494727 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
ACSS2-223ENST00000494727 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
ACSS2-223ENST00000494727 KIF21BO75037 1637 aa16.41■□□□□ 0.22
ACSS2-223ENST00000494727 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
ACSS2-223ENST00000494727 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
ACSS2-223ENST00000494727 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
ACSS2-223ENST00000494727 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
ACSS2-223ENST00000494727 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
ACSS2-223ENST00000494727 ABCC10Q5T3U5 1492 aa16.36■□□□□ 0.21
ACSS2-223ENST00000494727 KIF13AQ9H1H9 1805 aa16.36■□□□□ 0.21
ACSS2-223ENST00000494727 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
ACSS2-223ENST00000494727 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
ACSS2-223ENST00000494727 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
ACSS2-223ENST00000494727 ASXL2Q76L83 1435 aa16.33■□□□□ 0.2
ACSS2-223ENST00000494727 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
ACSS2-223ENST00000494727 ZCCHC11Q5TAX3 1644 aaKnown RBP16.33■□□□□ 0.2
ACSS2-223ENST00000494727 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
ACSS2-223ENST00000494727 ABCA8O94911 1581 aa16.3■□□□□ 0.2
ACSS2-223ENST00000494727 KDM5BQ9UGL1 1544 aa16.3■□□□□ 0.2
ACSS2-223ENST00000494727 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
ACSS2-223ENST00000494727 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
ACSS2-223ENST00000494727 EFCAB5A4FU69 1503 aa16.23■□□□□ 0.19
ACSS2-223ENST00000494727 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
ACSS2-223ENST00000494727 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
ACSS2-223ENST00000494727 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
ACSS2-223ENST00000494727 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
ACSS2-223ENST00000494727 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
ACSS2-223ENST00000494727 GLI2P10070 1586 aa16.18■□□□□ 0.18
ACSS2-223ENST00000494727 ATP10BO94823 1461 aa16.17■□□□□ 0.18
ACSS2-223ENST00000494727 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
ACSS2-223ENST00000494727 ARHGAP35Q9NRY4 1499 aa16.16■□□□□ 0.18
ACSS2-223ENST00000494727 KDM6BO15054 1643 aa16.16■□□□□ 0.18
ACSS2-223ENST00000494727 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms