RNA–Protein interactions for RNA: ENST00000493066.5

NMD3-210, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 3

Gene NMD3, Length 746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-210ENST00000493066 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
NMD3-210ENST00000493066 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
NMD3-210ENST00000493066 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
NMD3-210ENST00000493066 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
NMD3-210ENST00000493066 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
NMD3-210ENST00000493066 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
NMD3-210ENST00000493066 CFTRP13569 1480 aa12.36□□□□□ -0.43
NMD3-210ENST00000493066 SOGA1O94964 1423 aa12.36□□□□□ -0.43
NMD3-210ENST00000493066 HAX1O00165 279 aa12.33□□□□□ -0.44
NMD3-210ENST00000493066 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
NMD3-210ENST00000493066 CUX1P39880 1505 aa12.28□□□□□ -0.44
NMD3-210ENST00000493066 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
NMD3-210ENST00000493066 NESP48681 1621 aa12.27□□□□□ -0.44
NMD3-210ENST00000493066 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
NMD3-210ENST00000493066 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
NMD3-210ENST00000493066 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
NMD3-210ENST00000493066 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
NMD3-210ENST00000493066 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
NMD3-210ENST00000493066 EEA1Q15075 1411 aa12.17□□□□□ -0.46
NMD3-210ENST00000493066 C19orf67A6NJJ6 358 aa12.12□□□□□ -0.47
NMD3-210ENST00000493066 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
NMD3-210ENST00000493066 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
NMD3-210ENST00000493066 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
NMD3-210ENST00000493066 KIF21BO75037 1637 aa12.08□□□□□ -0.48
NMD3-210ENST00000493066 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
NMD3-210ENST00000493066 EVX2Q03828 476 aa12.08□□□□□ -0.48
NMD3-210ENST00000493066 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
NMD3-210ENST00000493066 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
NMD3-210ENST00000493066 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
NMD3-210ENST00000493066 CHADLQ6NUI6 762 aa12.07□□□□□ -0.48
NMD3-210ENST00000493066 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
NMD3-210ENST00000493066 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
NMD3-210ENST00000493066 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
NMD3-210ENST00000493066 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
NMD3-210ENST00000493066 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
NMD3-210ENST00000493066 CEP164Q9UPV0 1460 aa12.05□□□□□ -0.48
NMD3-210ENST00000493066 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
NMD3-210ENST00000493066 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
NMD3-210ENST00000493066 CUX2O14529 1486 aa12.03□□□□□ -0.48
NMD3-210ENST00000493066 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
NMD3-210ENST00000493066 PRXQ9BXM0 1461 aa12.02□□□□□ -0.48
NMD3-210ENST00000493066 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
NMD3-210ENST00000493066 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
NMD3-210ENST00000493066 PCGF6Q9BYE7 350 aa12.01□□□□□ -0.49
NMD3-210ENST00000493066 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
NMD3-210ENST00000493066 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
NMD3-210ENST00000493066 IGF1RP08069 1367 aa11.99□□□□□ -0.49
NMD3-210ENST00000493066 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.5
NMD3-210ENST00000493066 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
NMD3-210ENST00000493066 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
NMD3-210ENST00000493066 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
NMD3-210ENST00000493066 CLCN6P51797 869 aa11.93□□□□□ -0.5
NMD3-210ENST00000493066 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
NMD3-210ENST00000493066 CLIP1P30622 1438 aa11.91□□□□□ -0.5
NMD3-210ENST00000493066 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
NMD3-210ENST00000493066 GABBR2O75899 941 aa11.9□□□□□ -0.5
NMD3-210ENST00000493066 TRIM26Q12899 539 aaPredicted RBP11.9□□□□□ -0.5
NMD3-210ENST00000493066 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
NMD3-210ENST00000493066 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
NMD3-210ENST00000493066 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
NMD3-210ENST00000493066 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
NMD3-210ENST00000493066 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
NMD3-210ENST00000493066 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
NMD3-210ENST00000493066 TTBK1Q5TCY1 1321 aaPredicted RBP11.85□□□□□ -0.51
NMD3-210ENST00000493066 WDR62O43379 1518 aa11.84□□□□□ -0.51
NMD3-210ENST00000493066 PROM2Q8N271 834 aa11.83□□□□□ -0.52
NMD3-210ENST00000493066 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
NMD3-210ENST00000493066 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
NMD3-210ENST00000493066 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
NMD3-210ENST00000493066 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.525e-8■■■□□ 18
NMD3-210ENST00000493066 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
NMD3-210ENST00000493066 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
NMD3-210ENST00000493066 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
NMD3-210ENST00000493066 CUL7Q14999 1698 aa11.78□□□□□ -0.52
NMD3-210ENST00000493066 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
NMD3-210ENST00000493066 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
NMD3-210ENST00000493066 PBRM1Q86U86 1689 aa11.77□□□□□ -0.53
NMD3-210ENST00000493066 IFT140Q96RY7 1462 aa11.76□□□□□ -0.53
NMD3-210ENST00000493066 PAK3O75914 559 aaPredicted RBP11.74□□□□□ -0.53
NMD3-210ENST00000493066 HRCP23327 699 aa11.73□□□□□ -0.53
NMD3-210ENST00000493066 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
NMD3-210ENST00000493066 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
NMD3-210ENST00000493066 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.54
NMD3-210ENST00000493066 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
NMD3-210ENST00000493066 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
NMD3-210ENST00000493066 MNX1P50219 401 aaPredicted RBP11.69□□□□□ -0.54
NMD3-210ENST00000493066 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
NMD3-210ENST00000493066 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
NMD3-210ENST00000493066 FHAD1B1AJZ9 1412 aa11.68□□□□□ -0.54
NMD3-210ENST00000493066 FHOD3Q2V2M9 1422 aa11.68□□□□□ -0.54
NMD3-210ENST00000493066 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
NMD3-210ENST00000493066 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
NMD3-210ENST00000493066 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
NMD3-210ENST00000493066 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
NMD3-210ENST00000493066 PCF11O94913 1555 aaKnown RBP11.61□□□□□ -0.55
NMD3-210ENST00000493066 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
NMD3-210ENST00000493066 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
NMD3-210ENST00000493066 LHX8Q68G74 356 aa11.59□□□□□ -0.55
NMD3-210ENST00000493066 GRIN2AQ12879 1464 aa11.57□□□□□ -0.56
NMD3-210ENST00000493066 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms