RNA–Protein interactions for RNA: ENST00000493066.5

NMD3-210, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 3

Gene NMD3, Length 746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-210ENST00000493066 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
NMD3-210ENST00000493066 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
NMD3-210ENST00000493066 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
NMD3-210ENST00000493066 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
NMD3-210ENST00000493066 FOXD1Q16676 465 aa18.42■□□□□ 0.54
NMD3-210ENST00000493066 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
NMD3-210ENST00000493066 MSH5O43196 834 aa17.35■□□□□ 0.37
NMD3-210ENST00000493066 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
NMD3-210ENST00000493066 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
NMD3-210ENST00000493066 ADRA2BP18089 450 aa17.15■□□□□ 0.34
NMD3-210ENST00000493066 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
NMD3-210ENST00000493066 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
NMD3-210ENST00000493066 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
NMD3-210ENST00000493066 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
NMD3-210ENST00000493066 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
NMD3-210ENST00000493066 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
NMD3-210ENST00000493066 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
NMD3-210ENST00000493066 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
NMD3-210ENST00000493066 RNF216Q9NWF9 866 aaPredicted RBP15.1■□□□□ 0.01
NMD3-210ENST00000493066 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
NMD3-210ENST00000493066 NCBP3Q53F19 620 aaKnown RBP15□□□□□ -0.01
NMD3-210ENST00000493066 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
NMD3-210ENST00000493066 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
NMD3-210ENST00000493066 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
NMD3-210ENST00000493066 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
NMD3-210ENST00000493066 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
NMD3-210ENST00000493066 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
NMD3-210ENST00000493066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
NMD3-210ENST00000493066 KCNA4P22459 653 aa14.37□□□□□ -0.11
NMD3-210ENST00000493066 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
NMD3-210ENST00000493066 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
NMD3-210ENST00000493066 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
NMD3-210ENST00000493066 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
NMD3-210ENST00000493066 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
NMD3-210ENST00000493066 DCAF1Q9Y4B6 1507 aa13.91□□□□□ -0.18
NMD3-210ENST00000493066 APLP2Q06481 763 aa13.91□□□□□ -0.18
NMD3-210ENST00000493066 ABCC9O60706 1549 aa13.89□□□□□ -0.19
NMD3-210ENST00000493066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
NMD3-210ENST00000493066 CAPN15O75808 1086 aa13.88□□□□□ -0.19
NMD3-210ENST00000493066 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
NMD3-210ENST00000493066 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
NMD3-210ENST00000493066 DSG3P32926 999 aa13.8□□□□□ -0.2
NMD3-210ENST00000493066 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
NMD3-210ENST00000493066 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
NMD3-210ENST00000493066 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
NMD3-210ENST00000493066 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
NMD3-210ENST00000493066 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
NMD3-210ENST00000493066 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
NMD3-210ENST00000493066 NACADO15069 1562 aa13.61□□□□□ -0.23
NMD3-210ENST00000493066 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
NMD3-210ENST00000493066 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
NMD3-210ENST00000493066 ABCB7O75027 752 aa13.49□□□□□ -0.25
NMD3-210ENST00000493066 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
NMD3-210ENST00000493066 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
NMD3-210ENST00000493066 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.28
NMD3-210ENST00000493066 POLA2Q14181 598 aa13.3□□□□□ -0.28
NMD3-210ENST00000493066 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
NMD3-210ENST00000493066 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
NMD3-210ENST00000493066 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
NMD3-210ENST00000493066 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
NMD3-210ENST00000493066 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
NMD3-210ENST00000493066 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
NMD3-210ENST00000493066 ZBTB22O15209 634 aa13.17□□□□□ -0.3
NMD3-210ENST00000493066 POTEHQ6S545 545 aa13.17□□□□□ -0.3
NMD3-210ENST00000493066 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
NMD3-210ENST00000493066 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
NMD3-210ENST00000493066 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
NMD3-210ENST00000493066 WIZO95785 1651 aa13.05□□□□□ -0.32
NMD3-210ENST00000493066 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
NMD3-210ENST00000493066 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
NMD3-210ENST00000493066 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
NMD3-210ENST00000493066 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
NMD3-210ENST00000493066 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
NMD3-210ENST00000493066 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
NMD3-210ENST00000493066 FBLN2P98095 1184 aa12.82□□□□□ -0.36
NMD3-210ENST00000493066 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
NMD3-210ENST00000493066 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
NMD3-210ENST00000493066 ATAD2BQ9ULI0 1458 aa12.77□□□□□ -0.37
NMD3-210ENST00000493066 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
NMD3-210ENST00000493066 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
NMD3-210ENST00000493066 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
NMD3-210ENST00000493066 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
NMD3-210ENST00000493066 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
NMD3-210ENST00000493066 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
NMD3-210ENST00000493066 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
NMD3-210ENST00000493066 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
NMD3-210ENST00000493066 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
NMD3-210ENST00000493066 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
NMD3-210ENST00000493066 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
NMD3-210ENST00000493066 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
NMD3-210ENST00000493066 ABCC8Q09428 1581 aa12.57□□□□□ -0.4
NMD3-210ENST00000493066 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
NMD3-210ENST00000493066 LOC105371045A0A1W2PR82 267 aa12.55□□□□□ -0.4
NMD3-210ENST00000493066 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
NMD3-210ENST00000493066 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
NMD3-210ENST00000493066 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
NMD3-210ENST00000493066 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
NMD3-210ENST00000493066 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
NMD3-210ENST00000493066 FAM9AQ8IZU1 332 aaPredicted RBP12.49□□□□□ -0.41
NMD3-210ENST00000493066 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms