RNA–Protein interactions for RNA: ENST00000448413.5

SUMF1-204, Transcript of sulfatase modifying factor 1, humanhuman

TSL 2

Gene SUMF1, Length 3,150 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-204ENST00000448413 CLIP1P30622 1438 aa20.52■□□□□ 0.88
SUMF1-204ENST00000448413 FGD5Q6ZNL6 1462 aa20.51■□□□□ 0.87
SUMF1-204ENST00000448413 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
SUMF1-204ENST00000448413 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.45■□□□□ 0.86
SUMF1-204ENST00000448413 RTN4Q9NQC3 1192 aaKnown RBP20.42■□□□□ 0.86
SUMF1-204ENST00000448413 IGF1RP08069 1367 aa20.39■□□□□ 0.86
SUMF1-204ENST00000448413 NEFLP07196 543 aa20.39■□□□□ 0.85
SUMF1-204ENST00000448413 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
SUMF1-204ENST00000448413 FBLN2P98095 1184 aa20.37■□□□□ 0.85
SUMF1-204ENST00000448413 NBR1Q14596 966 aa20.37■□□□□ 0.85
SUMF1-204ENST00000448413 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
SUMF1-204ENST00000448413 ARID3CA6NKF2 412 aa20.36■□□□□ 0.85
SUMF1-204ENST00000448413 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
SUMF1-204ENST00000448413 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
SUMF1-204ENST00000448413 POLA1P09884 1462 aaPredicted RBP20.32■□□□□ 0.84
SUMF1-204ENST00000448413 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
SUMF1-204ENST00000448413 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
SUMF1-204ENST00000448413 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
SUMF1-204ENST00000448413 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
SUMF1-204ENST00000448413 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
SUMF1-204ENST00000448413 IRX6P78412 446 aaPredicted RBP20.25■□□□□ 0.83
SUMF1-204ENST00000448413 KIF21BO75037 1637 aa20.24■□□□□ 0.83
SUMF1-204ENST00000448413 IL27Q8NEV9 243 aa20.23■□□□□ 0.83
SUMF1-204ENST00000448413 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.83
SUMF1-204ENST00000448413 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
SUMF1-204ENST00000448413 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
SUMF1-204ENST00000448413 DNMBPQ6XZF7 1577 aa20.18■□□□□ 0.82
SUMF1-204ENST00000448413 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
SUMF1-204ENST00000448413 UBE2Q2Q8WVN8 375 aa20.15■□□□□ 0.82
SUMF1-204ENST00000448413 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.82
SUMF1-204ENST00000448413 ARAP1Q96P48 1450 aa20.14■□□□□ 0.82
SUMF1-204ENST00000448413 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
SUMF1-204ENST00000448413 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
SUMF1-204ENST00000448413 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
SUMF1-204ENST00000448413 DDX10Q13206 875 aaKnown RBP20.09■□□□□ 0.81
SUMF1-204ENST00000448413 EIF5BO60841 1220 aaKnown RBP20.09■□□□□ 0.81
SUMF1-204ENST00000448413 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
SUMF1-204ENST00000448413 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.81
SUMF1-204ENST00000448413 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
SUMF1-204ENST00000448413 ARHGAP35Q9NRY4 1499 aa20.06■□□□□ 0.8
SUMF1-204ENST00000448413 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
SUMF1-204ENST00000448413 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
SUMF1-204ENST00000448413 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
SUMF1-204ENST00000448413 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
SUMF1-204ENST00000448413 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
SUMF1-204ENST00000448413 ERICH6BQ5W0A0 696 aa20■□□□□ 0.79
SUMF1-204ENST00000448413 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
SUMF1-204ENST00000448413 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
SUMF1-204ENST00000448413 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
SUMF1-204ENST00000448413 RTL5Q5HYW3 569 aaPredicted RBP19.93■□□□□ 0.78
SUMF1-204ENST00000448413 NOP58Q9Y2X3 529 aaKnown RBP19.93■□□□□ 0.78
SUMF1-204ENST00000448413 PKNOX2Q96KN3 472 aa19.84■□□□□ 0.77
SUMF1-204ENST00000448413 B4GALNT3Q6L9W6 998 aa19.82■□□□□ 0.76
SUMF1-204ENST00000448413 HNRNPUQ00839 825 aaKnown RBP eCLIP19.78■□□□□ 0.76
SUMF1-204ENST00000448413 MTUS2Q5JR59 1369 aa19.78■□□□□ 0.76
SUMF1-204ENST00000448413 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
SUMF1-204ENST00000448413 TIMELESSQ9UNS1 1208 aa19.77■□□□□ 0.76
SUMF1-204ENST00000448413 GRIN2BQ13224 1484 aa19.77■□□□□ 0.75
SUMF1-204ENST00000448413 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
SUMF1-204ENST00000448413 ANP32CO43423 234 aa19.76■□□□□ 0.75
SUMF1-204ENST00000448413 CHIC2Q9UKJ5 165 aa19.76■□□□□ 0.75
SUMF1-204ENST00000448413 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
SUMF1-204ENST00000448413 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
SUMF1-204ENST00000448413 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
SUMF1-204ENST00000448413 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
SUMF1-204ENST00000448413 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
SUMF1-204ENST00000448413 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
SUMF1-204ENST00000448413 CUL7Q14999 1698 aa19.69■□□□□ 0.74
SUMF1-204ENST00000448413 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
SUMF1-204ENST00000448413 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
SUMF1-204ENST00000448413 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
SUMF1-204ENST00000448413 BRPF3Q9ULD4 1205 aa19.67■□□□□ 0.74
SUMF1-204ENST00000448413 WDR62O43379 1518 aa19.66■□□□□ 0.74
SUMF1-204ENST00000448413 PPP4R2Q9NY27 417 aa19.65■□□□□ 0.74
SUMF1-204ENST00000448413 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
SUMF1-204ENST00000448413 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
SUMF1-204ENST00000448413 FMN1Q68DA7 1419 aa19.64■□□□□ 0.74
SUMF1-204ENST00000448413 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
SUMF1-204ENST00000448413 SIN3AQ96ST3 1273 aa19.64■□□□□ 0.73
SUMF1-204ENST00000448413 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
SUMF1-204ENST00000448413 LRRC9Q6ZRR7 1453 aa19.63■□□□□ 0.73
SUMF1-204ENST00000448413 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
SUMF1-204ENST00000448413 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
SUMF1-204ENST00000448413 ANP32AP39687 249 aaKnown RBP19.6■□□□□ 0.73
SUMF1-204ENST00000448413 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
SUMF1-204ENST00000448413 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
SUMF1-204ENST00000448413 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
SUMF1-204ENST00000448413 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
SUMF1-204ENST00000448413 CASKIN1Q8WXD9 1431 aa19.57■□□□□ 0.72
SUMF1-204ENST00000448413 NEFMP07197 916 aa19.56■□□□□ 0.72
SUMF1-204ENST00000448413 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
SUMF1-204ENST00000448413 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
SUMF1-204ENST00000448413 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
SUMF1-204ENST00000448413 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
SUMF1-204ENST00000448413 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
SUMF1-204ENST00000448413 IQGAP2Q13576 1575 aa19.53■□□□□ 0.72
SUMF1-204ENST00000448413 CDK13Q14004 1512 aaKnown RBP19.53■□□□□ 0.72
SUMF1-204ENST00000448413 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
SUMF1-204ENST00000448413 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
SUMF1-204ENST00000448413 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms