RNA–Protein interactions for RNA: ENST00000438789.1

LINC00379-202, long intergenic non-protein coding RNA 379, humanhuman

TSL 3 BASIC

Gene LINC00379, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00379-202ENST00000438789 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
LINC00379-202ENST00000438789 LOC105371045A0A1W2PR82 267 aa13.94□□□□□ -0.18
LINC00379-202ENST00000438789 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
LINC00379-202ENST00000438789 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00379-202ENST00000438789 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
LINC00379-202ENST00000438789 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
LINC00379-202ENST00000438789 SOGA1O94964 1423 aa13.88□□□□□ -0.19
LINC00379-202ENST00000438789 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
LINC00379-202ENST00000438789 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
LINC00379-202ENST00000438789 HAX1O00165 279 aa13.86□□□□□ -0.19
LINC00379-202ENST00000438789 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
LINC00379-202ENST00000438789 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
LINC00379-202ENST00000438789 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
LINC00379-202ENST00000438789 CUX1P39880 1505 aa13.85□□□□□ -0.19
LINC00379-202ENST00000438789 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
LINC00379-202ENST00000438789 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
LINC00379-202ENST00000438789 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
LINC00379-202ENST00000438789 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
LINC00379-202ENST00000438789 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
LINC00379-202ENST00000438789 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
LINC00379-202ENST00000438789 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
LINC00379-202ENST00000438789 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
LINC00379-202ENST00000438789 NESP48681 1621 aa13.75□□□□□ -0.21
LINC00379-202ENST00000438789 RUSC2Q8N2Y8 1516 aa13.73□□□□□ -0.21
LINC00379-202ENST00000438789 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
LINC00379-202ENST00000438789 KIF21BO75037 1637 aa13.72□□□□□ -0.21
LINC00379-202ENST00000438789 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
LINC00379-202ENST00000438789 PRXQ9BXM0 1461 aa13.7□□□□□ -0.22
LINC00379-202ENST00000438789 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
LINC00379-202ENST00000438789 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
LINC00379-202ENST00000438789 CUX2O14529 1486 aa13.69□□□□□ -0.22
LINC00379-202ENST00000438789 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
LINC00379-202ENST00000438789 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
LINC00379-202ENST00000438789 IGF1RP08069 1367 aa13.68□□□□□ -0.22
LINC00379-202ENST00000438789 POLA1P09884 1462 aaPredicted RBP13.67□□□□□ -0.22
LINC00379-202ENST00000438789 MRC2Q9UBG0 1479 aa13.66□□□□□ -0.22
LINC00379-202ENST00000438789 EVX2Q03828 476 aa13.65□□□□□ -0.22
LINC00379-202ENST00000438789 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
LINC00379-202ENST00000438789 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
LINC00379-202ENST00000438789 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
LINC00379-202ENST00000438789 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
LINC00379-202ENST00000438789 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
LINC00379-202ENST00000438789 ERCC6Q03468 1493 aa13.58□□□□□ -0.24
LINC00379-202ENST00000438789 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
LINC00379-202ENST00000438789 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
LINC00379-202ENST00000438789 CLIP1P30622 1438 aa13.56□□□□□ -0.24
LINC00379-202ENST00000438789 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
LINC00379-202ENST00000438789 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
LINC00379-202ENST00000438789 WDR62O43379 1518 aa13.54□□□□□ -0.24
LINC00379-202ENST00000438789 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
LINC00379-202ENST00000438789 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
LINC00379-202ENST00000438789 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
LINC00379-202ENST00000438789 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
LINC00379-202ENST00000438789 CUL7Q14999 1698 aa13.49□□□□□ -0.25
LINC00379-202ENST00000438789 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
LINC00379-202ENST00000438789 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
LINC00379-202ENST00000438789 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
LINC00379-202ENST00000438789 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
LINC00379-202ENST00000438789 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
LINC00379-202ENST00000438789 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
LINC00379-202ENST00000438789 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
LINC00379-202ENST00000438789 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC00379-202ENST00000438789 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
LINC00379-202ENST00000438789 THOC2Q8NI27 1593 aaKnown RBP13.36□□□□□ -0.27
LINC00379-202ENST00000438789 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
LINC00379-202ENST00000438789 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
LINC00379-202ENST00000438789 GABBR2O75899 941 aa13.32□□□□□ -0.28
LINC00379-202ENST00000438789 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
LINC00379-202ENST00000438789 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
LINC00379-202ENST00000438789 FARP1Q9Y4F1 1045 aaPredicted RBP13.31□□□□□ -0.28
LINC00379-202ENST00000438789 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
LINC00379-202ENST00000438789 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
LINC00379-202ENST00000438789 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
LINC00379-202ENST00000438789 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
LINC00379-202ENST00000438789 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
LINC00379-202ENST00000438789 ADAMTS12P58397 1594 aa13.28□□□□□ -0.28
LINC00379-202ENST00000438789 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
LINC00379-202ENST00000438789 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
LINC00379-202ENST00000438789 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
LINC00379-202ENST00000438789 SNAPC4Q5SXM2 1469 aa13.25□□□□□ -0.29
LINC00379-202ENST00000438789 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
LINC00379-202ENST00000438789 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
LINC00379-202ENST00000438789 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
LINC00379-202ENST00000438789 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
LINC00379-202ENST00000438789 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
LINC00379-202ENST00000438789 EIF4G3O43432 1585 aaKnown RBP13.22□□□□□ -0.29
LINC00379-202ENST00000438789 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
LINC00379-202ENST00000438789 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
LINC00379-202ENST00000438789 PPARGC1BQ86YN6 1023 aaKnown RBP13.19□□□□□ -0.3
LINC00379-202ENST00000438789 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
LINC00379-202ENST00000438789 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
LINC00379-202ENST00000438789 HRCP23327 699 aa13.18□□□□□ -0.3
LINC00379-202ENST00000438789 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
LINC00379-202ENST00000438789 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
LINC00379-202ENST00000438789 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
LINC00379-202ENST00000438789 NUP160Q12769 1436 aa13.16□□□□□ -0.3
LINC00379-202ENST00000438789 CARMIL2Q6F5E8 1435 aa13.16□□□□□ -0.3
LINC00379-202ENST00000438789 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
LINC00379-202ENST00000438789 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
LINC00379-202ENST00000438789 CCDC18Q5T9S5 1454 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms