RNA–Protein interactions for RNA: ENST00000334975.13

KTN1-201, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-201ENST00000334975 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
KTN1-201ENST00000334975 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.443e-6■■■■□ 24.7
KTN1-201ENST00000334975 TDRD9Q8NDG6 1382 aaKnown RBP12.28□□□□□ -0.44
KTN1-201ENST00000334975 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
KTN1-201ENST00000334975 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
KTN1-201ENST00000334975 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
KTN1-201ENST00000334975 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
KTN1-201ENST00000334975 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
KTN1-201ENST00000334975 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
KTN1-201ENST00000334975 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
KTN1-201ENST00000334975 FBLN2P98095 1184 aa12.18□□□□□ -0.46
KTN1-201ENST00000334975 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
KTN1-201ENST00000334975 APLP2Q06481 763 aa12.16□□□□□ -0.46
KTN1-201ENST00000334975 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
KTN1-201ENST00000334975 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
KTN1-201ENST00000334975 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
KTN1-201ENST00000334975 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
KTN1-201ENST00000334975 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
KTN1-201ENST00000334975 RNF39Q9H2S5 420 aa12.14□□□□□ -0.47
KTN1-201ENST00000334975 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
KTN1-201ENST00000334975 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
KTN1-201ENST00000334975 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
KTN1-201ENST00000334975 CHD1O14646 1710 aa12.1□□□□□ -0.47
KTN1-201ENST00000334975 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
KTN1-201ENST00000334975 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
KTN1-201ENST00000334975 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
KTN1-201ENST00000334975 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
KTN1-201ENST00000334975 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
KTN1-201ENST00000334975 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
KTN1-201ENST00000334975 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
KTN1-201ENST00000334975 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
KTN1-201ENST00000334975 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
KTN1-201ENST00000334975 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
KTN1-201ENST00000334975 IGF1RP08069 1367 aa12.02□□□□□ -0.49
KTN1-201ENST00000334975 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
KTN1-201ENST00000334975 CAPN15O75808 1086 aa12.01□□□□□ -0.49
KTN1-201ENST00000334975 POLA2Q14181 598 aa12.01□□□□□ -0.49
KTN1-201ENST00000334975 GRIN2AQ12879 1464 aa12.01□□□□□ -0.49
KTN1-201ENST00000334975 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
KTN1-201ENST00000334975 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
KTN1-201ENST00000334975 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
KTN1-201ENST00000334975 CARMIL1Q5VZK9 1371 aa11.95□□□□□ -0.5
KTN1-201ENST00000334975 CLASP1Q7Z460 1538 aa11.95□□□□□ -0.5
KTN1-201ENST00000334975 CUL7Q14999 1698 aa11.94□□□□□ -0.5
KTN1-201ENST00000334975 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
KTN1-201ENST00000334975 ARXQ96QS3 562 aa11.93□□□□□ -0.5
KTN1-201ENST00000334975 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
KTN1-201ENST00000334975 NUP160Q12769 1436 aa11.93□□□□□ -0.5
KTN1-201ENST00000334975 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
KTN1-201ENST00000334975 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
KTN1-201ENST00000334975 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
KTN1-201ENST00000334975 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
KTN1-201ENST00000334975 ABCB7O75027 752 aa11.88□□□□□ -0.51
KTN1-201ENST00000334975 CYB5RLQ6IPT4 315 aa11.88□□□□□ -0.51
KTN1-201ENST00000334975 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
KTN1-201ENST00000334975 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
KTN1-201ENST00000334975 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
KTN1-201ENST00000334975 PROM2Q8N271 834 aa11.84□□□□□ -0.51
KTN1-201ENST00000334975 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
KTN1-201ENST00000334975 ARAP1Q96P48 1450 aa11.84□□□□□ -0.51
KTN1-201ENST00000334975 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
KTN1-201ENST00000334975 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
KTN1-201ENST00000334975 EEA1Q15075 1411 aa11.83□□□□□ -0.52
KTN1-201ENST00000334975 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
KTN1-201ENST00000334975 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
KTN1-201ENST00000334975 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
KTN1-201ENST00000334975 IQGAP2Q13576 1575 aa11.78□□□□□ -0.52
KTN1-201ENST00000334975 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
KTN1-201ENST00000334975 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
KTN1-201ENST00000334975 BCANQ96GW7 911 aa11.76□□□□□ -0.53
KTN1-201ENST00000334975 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
KTN1-201ENST00000334975 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
KTN1-201ENST00000334975 DSG3P32926 999 aa11.72□□□□□ -0.53
KTN1-201ENST00000334975 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
KTN1-201ENST00000334975 KIF21BO75037 1637 aa11.71□□□□□ -0.53
KTN1-201ENST00000334975 PLCB2Q00722 1185 aa11.71□□□□□ -0.53
KTN1-201ENST00000334975 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
KTN1-201ENST00000334975 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
KTN1-201ENST00000334975 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
KTN1-201ENST00000334975 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
KTN1-201ENST00000334975 PTPRGP23470 1445 aa11.68□□□□□ -0.54
KTN1-201ENST00000334975 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
KTN1-201ENST00000334975 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
KTN1-201ENST00000334975 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
KTN1-201ENST00000334975 GOLGA3Q08378 1498 aa11.67□□□□□ -0.54
KTN1-201ENST00000334975 KIAA0556O60303 1618 aa11.67□□□□□ -0.54
KTN1-201ENST00000334975 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
KTN1-201ENST00000334975 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
KTN1-201ENST00000334975 ADCY10Q96PN6 1610 aa11.62□□□□□ -0.55
KTN1-201ENST00000334975 UACAQ9BZF9 1416 aa11.6□□□□□ -0.55
KTN1-201ENST00000334975 SAMD9Q5K651 1589 aa11.59□□□□□ -0.55
KTN1-201ENST00000334975 HAP1P54257 671 aaPredicted RBP11.59□□□□□ -0.55
KTN1-201ENST00000334975 PLB1Q6P1J6 1458 aa11.58□□□□□ -0.56
KTN1-201ENST00000334975 HOMEZQ8IX15 550 aa11.58□□□□□ -0.56
KTN1-201ENST00000334975 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
KTN1-201ENST00000334975 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
KTN1-201ENST00000334975 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
KTN1-201ENST00000334975 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
KTN1-201ENST00000334975 LOC105371045A0A1W2PR82 267 aa11.55□□□□□ -0.56
KTN1-201ENST00000334975 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms