RNA–Protein interactions for RNA: ENSMUST00000192155.5

Ptch1-202, Transcript of Protein patched homolog 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ptch1, Length 7,002 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1-202ENSMUST00000192155 Irx6Q9ER75 438 aa10.15□□□□□ -0.78
Ptch1-202ENSMUST00000192155 NgefQ8CHT1 710 aa10.13□□□□□ -0.79
Ptch1-202ENSMUST00000192155 ClspnQ80YR7 1315 aa10.13□□□□□ -0.79
Ptch1-202ENSMUST00000192155 Ercc6F8VPZ5 1481 aa10.13□□□□□ -0.79
Ptch1-202ENSMUST00000192155 Arid3cA6PWV5 409 aa10.12□□□□□ -0.79
Ptch1-202ENSMUST00000192155 Znf326O88291 580 aa10.11□□□□□ -0.79
Ptch1-202ENSMUST00000192155 Upf2A2AT37 1269 aaKnown RBP10.1□□□□□ -0.79
Ptch1-202ENSMUST00000192155 Kif15Q6P9L6 1387 aa10.09□□□□□ -0.79
Ptch1-202ENSMUST00000192155 Anp32aO35381 247 aa10.06□□□□□ -0.8
Ptch1-202ENSMUST00000192155 Ggt6Q6PDE7 497 aa10.06□□□□□ -0.8
Ptch1-202ENSMUST00000192155 Clip1Q922J3 1391 aa10.05□□□□□ -0.8
Ptch1-202ENSMUST00000192155 Rad21Q61550 635 aaKnown RBP10.05□□□□□ -0.8
Ptch1-202ENSMUST00000192155 Cep164Q5DU05 1446 aa10.04□□□□□ -0.8
Ptch1-202ENSMUST00000192155 Pds5bQ4VA53 1446 aaKnown RBP10.01□□□□□ -0.81
Ptch1-202ENSMUST00000192155 AknaQ80VW7 1404 aa9.99□□□□□ -0.81
Ptch1-202ENSMUST00000192155 Sall2Q9QX96 1004 aa9.98□□□□□ -0.81
Ptch1-202ENSMUST00000192155 Ccer2J3QPU5 274 aa9.98□□□□□ -0.81
Ptch1-202ENSMUST00000192155 Trim26Q99PN3 545 aa9.96□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Ppp4r2Q0VGB7 417 aa9.95□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Ythdc1E9Q5K9 736 aaKnown RBP9.95□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Q8BT18 775 aa9.94□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Stk24Q99KH8 431 aa9.94□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Kdm2aP59997 1161 aa9.93□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Vsig10D3YX43 558 aa9.93□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Fgd1P52734 960 aa9.93□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Rtn4Q99P72 1162 aaKnown RBP9.93□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Clstn2Q9ER65 966 aa9.92□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Pip4k2bQ80XI4 416 aa9.91□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Smarca2Q6DIC0 1577 aa9.9□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Rsf1E9PWW9 1441 aaKnown RBP9.9□□□□□ -0.82
Ptch1-202ENSMUST00000192155 Calr4Q3TQS0 420 aa9.89□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Arid4bA2CG63 1314 aaKnown RBP9.89□□□□□ -0.83
Ptch1-202ENSMUST00000192155 BlmO88700 1416 aa9.88□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Rrp7aQ9D1C9 280 aaKnown RBP9.88□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Zfp777B9EKF4 885 aa9.88□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Bcl11bQ99PV8 884 aa9.87□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Mrs2Q5NCE8 434 aa9.86□□□□□ -0.83
Ptch1-202ENSMUST00000192155 DekQ7TNV0 380 aaKnown RBP9.86□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Atad2bE9Q166 1460 aaKnown RBP9.86□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Golga3P55937 1487 aa9.84□□□□□ -0.83
Ptch1-202ENSMUST00000192155 PnnO35691 725 aaKnown RBP9.84□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Rgl3Q3UYI5 709 aa9.84□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Lmod3E9QA62 571 aa9.84□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Sox12Q04890 314 aa9.84□□□□□ -0.83
Ptch1-202ENSMUST00000192155 Eif4g2Q62448 906 aaKnown RBP9.82□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Grwd1Q810D6 446 aaKnown RBP9.82□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Ccdc18Q640L5 1455 aa9.81□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Cnga1P29974 684 aa9.8□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Ppm1fQ8CGA0 452 aa9.8□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Anks4bQ8K3X6 423 aa9.8□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Aplp2Q06335 707 aa9.78□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Plin1Q8CGN5 517 aa9.78□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Stk26Q99JT2 416 aa9.78□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Trim44Q9QXA7 346 aa9.78□□□□□ -0.84
Ptch1-202ENSMUST00000192155 Apbb1Q9QXJ1 710 aa9.77□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Wdr43Q6ZQL4 677 aaKnown RBP9.76□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Smarca4Q3TKT4 1613 aaKnown RBP9.76□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Setd5Q5XJV7 1441 aa9.76□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Pabpn1Q8CCS6 302 aaKnown RBP9.76□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Znf316Q6PGE4 1016 aa9.75□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Senp3Q9EP97 568 aaKnown RBP9.75□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Clstn1Q9EPL2 979 aa9.74□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Dnajc5bQ9CQ94 199 aa9.74□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Dnai2A2AC93 623 aa9.74□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Chrna2Q91X60 512 aa9.74□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Chmp4bQ9D8B3 224 aaKnown RBP9.74□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Rpap1Q80TE0 1409 aa9.73□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Trim30dE9PWL0 497 aa9.73□□□□□ -0.85
Ptch1-202ENSMUST00000192155 CftrP26361 1476 aa9.73□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Ccdc9Q8VC31 543 aaKnown RBP9.72□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Neurod2Q62414 383 aa9.72□□□□□ -0.85
Ptch1-202ENSMUST00000192155 IqubQ8CDK3 788 aa9.72□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Hsp90ab1P11499 724 aaKnown RBP9.72□□□□□ -0.85
Ptch1-202ENSMUST00000192155 Pes1Q9EQ61 584 aaKnown RBP9.71□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Psme1P97371 249 aa9.7□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Adam1bQ8R534 806 aa9.7□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Exosc9Q9JHI7 438 aaKnown RBP9.7□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Txndc2Q6P902 515 aa9.7□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Stag3O70576 1240 aa9.69□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Baz1bQ9Z277 1479 aa9.69□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Gm20521D3Z5F7 333 aa9.69□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Iqcf3Q9D498 203 aa9.69□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Srpk2O54781 681 aaKnown RBP9.69□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Aebp2Q9Z248 504 aaKnown RBP9.68□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Eea1Q8BL66 1411 aa9.68□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Mroh3A0A1D5RM54 893 aa9.68□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Gm6268A2A3U9 297 aa9.68□□□□□ -0.86
Ptch1-202ENSMUST00000192155 CanxP35564 591 aaKnown RBP9.68□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Ofd1Q80Z25 1017 aa9.68□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Armcx1Q9CX83 456 aa9.67□□□□□ -0.86
Ptch1-202ENSMUST00000192155 1700019A02RikA0A087WPV9 146 aa9.66□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Cux2P70298 1426 aa9.65□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Cttnbp2B9EJA2 1648 aa9.65□□□□□ -0.86
Ptch1-202ENSMUST00000192155 PtmaP26350 111 aa9.65□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Card11Q8CIS0 1159 aa9.65□□□□□ -0.86
Ptch1-202ENSMUST00000192155 Cyb5rlB1AS42 316 aa9.64□□□□□ -0.87
Ptch1-202ENSMUST00000192155 Dbr1Q923B1 550 aa9.64□□□□□ -0.87
Ptch1-202ENSMUST00000192155 Phldb1Q6PDH0 1371 aaKnown RBP9.64□□□□□ -0.87
Ptch1-202ENSMUST00000192155 Fmn1Q05860 1466 aa9.63□□□□□ -0.87
Ptch1-202ENSMUST00000192155 Ciz1Q8VEH2 845 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 57.6 ms