RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 NgefQ8CHT1 710 aa15.42■□□□□ 0.06
Chd3-202ENSMUST00000108661 Irx6Q9ER75 438 aa15.41■□□□□ 0.06
Chd3-202ENSMUST00000108661 Pds5bQ4VA53 1446 aaKnown RBP15.38■□□□□ 0.05
Chd3-202ENSMUST00000108661 Setd5Q5XJV7 1441 aa15.36■□□□□ 0.05
Chd3-202ENSMUST00000108661 Dcaf1Q80TR8 1506 aa15.36■□□□□ 0.05
Chd3-202ENSMUST00000108661 Csrnp3P59055 597 aa15.35■□□□□ 0.05
Chd3-202ENSMUST00000108661 AknaQ80VW7 1404 aa15.35■□□□□ 0.05
Chd3-202ENSMUST00000108661 Rrp7aQ9D1C9 280 aaKnown RBP15.35■□□□□ 0.05
Chd3-202ENSMUST00000108661 Srpk2O54781 681 aaKnown RBP15.34■□□□□ 0.05
Chd3-202ENSMUST00000108661 Kdm2aP59997 1161 aa15.33■□□□□ 0.05
Chd3-202ENSMUST00000108661 Arid3cA6PWV5 409 aa15.33■□□□□ 0.04
Chd3-202ENSMUST00000108661 CatipB9EKE5 520 aa15.33■□□□□ 0.04
Chd3-202ENSMUST00000108661 Lmod3E9QA62 571 aa15.31■□□□□ 0.04
Chd3-202ENSMUST00000108661 Stk24Q99KH8 431 aa15.3■□□□□ 0.04
Chd3-202ENSMUST00000108661 Baz1aO88379 1555 aa15.3■□□□□ 0.04
Chd3-202ENSMUST00000108661 Exosc9Q9JHI7 438 aaKnown RBP15.29■□□□□ 0.04
Chd3-202ENSMUST00000108661 Fgd1P52734 960 aa15.28■□□□□ 0.04
Chd3-202ENSMUST00000108661 Rgl3Q3UYI5 709 aa15.27■□□□□ 0.04
Chd3-202ENSMUST00000108661 Mroh3A0A1D5RM54 893 aa15.26■□□□□ 0.03
Chd3-202ENSMUST00000108661 Gm20521D3Z5F7 333 aa15.26■□□□□ 0.03
Chd3-202ENSMUST00000108661 Arid4bA2CG63 1314 aaKnown RBP15.24■□□□□ 0.03
Chd3-202ENSMUST00000108661 Kdm5dQ62240 1548 aa15.23■□□□□ 0.03
Chd3-202ENSMUST00000108661 Aplp2Q06335 707 aa15.23■□□□□ 0.03
Chd3-202ENSMUST00000108661 Rad21Q61550 635 aaKnown RBP15.22■□□□□ 0.03
Chd3-202ENSMUST00000108661 Znf326O88291 580 aa15.21■□□□□ 0.03
Chd3-202ENSMUST00000108661 Stag3O70576 1240 aa15.2■□□□□ 0.02
Chd3-202ENSMUST00000108661 Rtn4Q99P72 1162 aaKnown RBP15.19■□□□□ 0.02
Chd3-202ENSMUST00000108661 Trim26Q99PN3 545 aa15.18■□□□□ 0.02
Chd3-202ENSMUST00000108661 Mtus2Q3UHD3 1353 aa15.17■□□□□ 0.02
Chd3-202ENSMUST00000108661 ClspnQ80YR7 1315 aa15.17■□□□□ 0.02
Chd3-202ENSMUST00000108661 Rtl5Q5DTT4 599 aa15.16■□□□□ 0.02
Chd3-202ENSMUST00000108661 Golga3P55937 1487 aa15.15■□□□□ 0.02
Chd3-202ENSMUST00000108661 Grwd1Q810D6 446 aaKnown RBP15.14■□□□□ 0.01
Chd3-202ENSMUST00000108661 Q8BT18 775 aa15.12■□□□□ 0.01
Chd3-202ENSMUST00000108661 Psme1P97371 249 aa15.12■□□□□ 0.01
Chd3-202ENSMUST00000108661 Pabpn1Q8CCS6 302 aaKnown RBP15.11■□□□□ 0.01
Chd3-202ENSMUST00000108661 Vsig10D3YX43 558 aa15.1■□□□□ 0.01
Chd3-202ENSMUST00000108661 Lemd3Q9WU40 921 aa15.09■□□□□ 0.01
Chd3-202ENSMUST00000108661 Hsp90aa1P07901 733 aaKnown RBP15.08■□□□□ 0.01
Chd3-202ENSMUST00000108661 Eea1Q8BL66 1411 aa15.08■□□□□ 0
Chd3-202ENSMUST00000108661 Anp32aO35381 247 aa15.08■□□□□ 0
Chd3-202ENSMUST00000108661 Txndc2Q6P902 515 aa15.06■□□□□ 0
Chd3-202ENSMUST00000108661 Rpap1Q80TE0 1409 aa15.05■□□□□ 0
Chd3-202ENSMUST00000108661 Ecm2Q5FW85 670 aa15.03■□□□□ -0
Chd3-202ENSMUST00000108661 HdgfP51859 237 aaKnown RBP15.03■□□□□ -0
Chd3-202ENSMUST00000108661 Zfp777B9EKF4 885 aa15.02□□□□□ -0.01
Chd3-202ENSMUST00000108661 Iqcf3Q9D498 203 aa15.01□□□□□ -0.01
Chd3-202ENSMUST00000108661 Kif27Q7M6Z4 1394 aa15.01□□□□□ -0.01
Chd3-202ENSMUST00000108661 Upf2A2AT37 1269 aaKnown RBP15□□□□□ -0.01
Chd3-202ENSMUST00000108661 Ubap1lG3UW59 384 aa15□□□□□ -0.01
Chd3-202ENSMUST00000108661 Ppm1fQ8CGA0 452 aa15□□□□□ -0.01
Chd3-202ENSMUST00000108661 Mapk8ip3Q9ESN9 1337 aa15□□□□□ -0.01
Chd3-202ENSMUST00000108661 Stk26Q99JT2 416 aa14.99□□□□□ -0.01
Chd3-202ENSMUST00000108661 Card11Q8CIS0 1159 aa14.99□□□□□ -0.01
Chd3-202ENSMUST00000108661 Sox12Q04890 314 aa14.98□□□□□ -0.01
Chd3-202ENSMUST00000108661 Clstn1Q9EPL2 979 aa14.98□□□□□ -0.01
Chd3-202ENSMUST00000108661 Cux2P70298 1426 aa14.98□□□□□ -0.01
Chd3-202ENSMUST00000108661 Cnga1P29974 684 aa14.97□□□□□ -0.01
Chd3-202ENSMUST00000108661 Phldb1Q6PDH0 1371 aaKnown RBP14.97□□□□□ -0.01
Chd3-202ENSMUST00000108661 Eif4g2Q62448 906 aaKnown RBP14.96□□□□□ -0.01
Chd3-202ENSMUST00000108661 Bcl11bQ99PV8 884 aa14.95□□□□□ -0.02
Chd3-202ENSMUST00000108661 1700019A02RikA0A087WPV9 146 aa14.93□□□□□ -0.02
Chd3-202ENSMUST00000108661 Rsph4aQ8BYM7 716 aa14.93□□□□□ -0.02
Chd3-202ENSMUST00000108661 Mrs2Q5NCE8 434 aa14.93□□□□□ -0.02
Chd3-202ENSMUST00000108661 DekQ7TNV0 380 aaKnown RBP14.9□□□□□ -0.02
Chd3-202ENSMUST00000108661 Map4P27546 1125 aaKnown RBP14.88□□□□□ -0.03
Chd3-202ENSMUST00000108661 Gm6268A2A3U9 297 aa14.87□□□□□ -0.03
Chd3-202ENSMUST00000108661 Ppp4r2Q0VGB7 417 aa14.87□□□□□ -0.03
Chd3-202ENSMUST00000108661 Sycp2Q9CUU3 1500 aa14.86□□□□□ -0.03
Chd3-202ENSMUST00000108661 Baz1bQ9Z277 1479 aa14.86□□□□□ -0.03
Chd3-202ENSMUST00000108661 Kif3bQ61771 747 aa14.84□□□□□ -0.03
Chd3-202ENSMUST00000108661 Rtf1A2AQ19 715 aaKnown RBP14.84□□□□□ -0.03
Chd3-202ENSMUST00000108661 Pip4k2bQ80XI4 416 aa14.83□□□□□ -0.04
Chd3-202ENSMUST00000108661 Aebp1Q640N1 1128 aa14.82□□□□□ -0.04
Chd3-202ENSMUST00000108661 Neurod2Q62414 383 aa14.82□□□□□ -0.04
Chd3-202ENSMUST00000108661 Plin1Q8CGN5 517 aa14.81□□□□□ -0.04
Chd3-202ENSMUST00000108661 Ciz1Q8VEH2 845 aa14.81□□□□□ -0.04
Chd3-202ENSMUST00000108661 Znf316Q6PGE4 1016 aa14.8□□□□□ -0.04
Chd3-202ENSMUST00000108661 Cwc22Q8C5N3 908 aaKnown RBP14.8□□□□□ -0.04
Chd3-202ENSMUST00000108661 Dhx57Q6P5D3 1388 aaKnown RBP14.79□□□□□ -0.04
Chd3-202ENSMUST00000108661 Gtf2e1Q9D0D5 440 aa14.78□□□□□ -0.04
Chd3-202ENSMUST00000108661 Pak3Q61036 559 aa14.77□□□□□ -0.04
Chd3-202ENSMUST00000108661 Ap3b2Q9JME5 1082 aa14.77□□□□□ -0.05
Chd3-202ENSMUST00000108661 NudcO35685 332 aaKnown RBP14.77□□□□□ -0.05
Chd3-202ENSMUST00000108661 Fmn1Q05860 1466 aa14.76□□□□□ -0.05
Chd3-202ENSMUST00000108661 Ifit1bl1D3Z6F0 470 aa14.76□□□□□ -0.05
Chd3-202ENSMUST00000108661 Mia2Q91ZV0 1396 aa14.76□□□□□ -0.05
Chd3-202ENSMUST00000108661 Nol10Q5RJG1 687 aaKnown RBP14.75□□□□□ -0.05
Chd3-202ENSMUST00000108661 Soga1E1U8D0 1418 aa14.74□□□□□ -0.05
Chd3-202ENSMUST00000108661 Fbln2P37889 1221 aa14.73□□□□□ -0.05
Chd3-202ENSMUST00000108661 Birc3O08863 600 aa14.73□□□□□ -0.05
Chd3-202ENSMUST00000108661 Chrna2Q91X60 512 aa14.73□□□□□ -0.05
Chd3-202ENSMUST00000108661 Pes1Q9EQ61 584 aaKnown RBP14.73□□□□□ -0.05
Chd3-202ENSMUST00000108661 Atad2bE9Q166 1460 aaKnown RBP14.73□□□□□ -0.05
Chd3-202ENSMUST00000108661 Apbb1Q9QXJ1 710 aa14.72□□□□□ -0.05
Chd3-202ENSMUST00000108661 Shroom4Q1W617 1475 aa14.71□□□□□ -0.05
Chd3-202ENSMUST00000108661 U2surpQ6NV83 1029 aaKnown RBP14.69□□□□□ -0.06
Chd3-202ENSMUST00000108661 Tnnt1O88346 262 aa14.69□□□□□ -0.06
Chd3-202ENSMUST00000108661 Chmp4bQ9D8B3 224 aaKnown RBP14.68□□□□□ -0.06
Chd3-202ENSMUST00000108661 Cyb5rlB1AS42 316 aa14.67□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms