RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 TP53TG3Q9ULZ0 132 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 TRAV8-6A0A0B4J262 113 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 SMIM27A0A1W2PRY6 76 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 A8MWL6 223 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 KRTAP4-16G5E9R7 235 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-205ENST00000462254 PSPHP1O15172 72 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 GNRH2O43555 120 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 IGLC6P0CF74 106 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
CSMD3-205ENST00000462254 TCL1AP56279 114 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 DEFB135Q30KP9 77 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 TDRG1Q3Y452 100 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 DNLZQ5SXM8 178 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 ZNF705AQ6ZN79 300 aaPredicted RBP3.25□□□□□ -1.89
CSMD3-205ENST00000462254 Q6ZTC4 211 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 NIT1Q86X76 327 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 TSKUQ8WUA8 353 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 GTSF1Q8WW33 167 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 VSIG2Q96IQ7 327 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 YPEL4Q96NS1 127 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 TUBA4BQ9H853 241 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 EDA2RQ9HAV5 297 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 SCRT2Q9NQ03 307 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 TMEM242Q9NWH2 141 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 IL36BQ9NZH7 164 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 DNHD1Q96M86 4753 aa3.25□□□□□ -1.89
CSMD3-205ENST00000462254 HIGD1CA8MV81 97 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 H3BVH4 76 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 S100A8P05109 93 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 CXCL1P09341 107 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 ARMS2P0C7Q2 107 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 AZU1P20160 251 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 CTRLP40313 264 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 RPS20P60866 119 aaKnown RBP3.24□□□□□ -1.89
CSMD3-205ENST00000462254 ELOBQ15370 118 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 LYZL1Q6UWQ5 148 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 TMEM256Q8N2U0 113 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.24□□□□□ -1.89
CSMD3-205ENST00000462254 FER1L6-AS1Q8NA97 138 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 NUP35Q8NFH5 326 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 C7orf33Q8WU49 177 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 KCNS1Q96KK3 526 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 LINC01587Q99440 93 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 PYGO2Q9BRQ0 406 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 GFRA4Q9GZZ7 299 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 MDFICQ9P1T7 246 aa3.24□□□□□ -1.89
CSMD3-205ENST00000462254 NOTCH1P46531 2555 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 TGIF2-C20orf24A0A0A6YYL0 155 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 MUC21A0A0G2JKD1 596 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 MUC21A0A140T8X8 626 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 A0A1B0GXF2 115 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 NDUFS5O43920 106 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 SPINK4O60575 86 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 SERF1AO75920 110 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 HTN1P15515 57 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 S100PP25815 95 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 ASIPP42127 132 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 PSMB2P49721 201 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 FOXA3P55318 350 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-205ENST00000462254 REG3AQ06141 175 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 MRPL54Q6P161 138 aaKnown RBP3.23□□□□□ -1.89
CSMD3-205ENST00000462254 Q8N377 158 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 OR10AG1Q8NH19 301 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 TMEM263Q8WUH6 116 aaKnown RBP3.23□□□□□ -1.89
CSMD3-205ENST00000462254 IMMP2LQ96T52 175 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 SMCO4Q9NRQ5 59 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 NAT8BQ9UHF3 227 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 TIMM8BQ9Y5J9 83 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-205ENST00000462254 NBEAL1Q6ZS30 2694 aa3.23□□□□□ -1.89
CSMD3-205ENST00000462254 TRBV24-1A0A075B6N3 115 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 TRAV9-1A0A075B6T8 112 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 A0A1B0GUT8 65 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 SMIM9A6NGZ8 99 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 COLCA2A8K830 154 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 SMIM6P0DI80 62 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 NTF3P20783 257 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 S100A4P26447 101 aaKnown RBP3.22□□□□□ -1.89
CSMD3-205ENST00000462254 HERVK_113P61574 105 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 SMAGPQ0VAQ4 97 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 RRN3P1Q2M238 152 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 DEFB121Q5J5C9 76 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 SBSPONQ8IVN8 264 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 Q8NAQ8 132 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 OR11H2Q8NH07 326 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 C16orf74Q96GX8 76 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 CNFNQ9BYD5 112 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 MGAM2Q2M2H8 2515 aa3.22□□□□□ -1.89
CSMD3-205ENST00000462254 TENM3Q9P273 2699 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 F2Z2F3 143 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 M0R381 172 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 DEFB4AO15263 64 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 RAB4BP61018 213 aa3.21□□□□□ -1.9
CSMD3-205ENST00000462254 HBBP68871 147 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms