RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Rab29Q91YQ1 204 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Sumo3Q9Z172 110 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 FancmQ8BGE5 2021 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Col27a1Q5QNQ9 1845 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Ighv6-4A0A0A6YX19 119 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr609E9Q4X7 319 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Slc25a47Q6IS41 310 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Rtn4rl2Q7M6Z0 420 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Tmem204Q7TQI0 226 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 9930022D16RikQ8BG27 128 aa12.61□□□□□ -0.39
Upf1-202ENSMUST00000215817 Ighv1-47A0A0A6YY41 117 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm8653K9J7G2 307 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Vmn1r117L7N2C9 307 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Hspb7P35385 169 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Wnt10aP70701 417 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Tmem88bQ3TYP4 173 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Ifna12Q80SS5 189 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Ighv1-7A0A075B5T7 117 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Rhox7bA6PW38 321 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Khdc1bP0C7A0 126 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Phxr2P15972 65 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 PpoxP51175 477 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm4792Q569Q2 183 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr411Q7TRW8 315 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Cml1Q9JIZ0 222 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm44501A8R0T9 150 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Twist1P26687 206 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Fam3dP97805 223 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Slc36a4Q8CH36 500 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr577Q8VH11 312 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Nicn1Q9CQM0 213 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr1118A0A0J9YUE7 307 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr204E9Q8M0 305 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Evi2aP20934 223 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 LoxP28301 411 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Foxa3P35584 353 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Nutf2P61971 127 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Zic3Q62521 466 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Btf3Q64152 204 aaKnown RBP12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Cd200r1Q9ES57 326 aa12.6□□□□□ -0.39
Upf1-202ENSMUST00000215817 Tns1E9Q0S6 1888 aaKnown RBP12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 6430628N08RikA0A0U1RQ45 177 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gcm1P70348 436 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Rtl4Q3URY0 304 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Prss44Q402U7 372 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Arrdc5Q497K5 325 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 TecrQ9CY27 308 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Dnajc30P59041 219 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm17334Q8C6U3 126 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm3512L7N206 146 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 A230072I06RikQ3UUJ8 172 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr916Q8VG53 310 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Klk10Q99M20 278 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Cmtm2bQ9DAC0 210 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Dolpp1Q9JMF7 238 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Mpdu1Q9R0Q9 247 aa12.59□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm45871A0A1B0GRI9 540 aa12.58□□□□□ -0.39
Upf1-202ENSMUST00000215817 Vmn1r232A2RTT5 351 aa12.58□□□□□ -0.39
Upf1-202ENSMUST00000215817 Igfbpl1Q80W15 270 aa12.58□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr127Q8VF25 323 aa12.58□□□□□ -0.39
Upf1-202ENSMUST00000215817 Tpsg1Q9QUL7 311 aa12.58□□□□□ -0.39
Upf1-202ENSMUST00000215817 Gm14214V9GX35 225 aa12.58□□□□□ -0.39
Upf1-202ENSMUST00000215817 Olfr491Q8VG06 310 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gp2Q9D733 531 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Ccpg1osV9GXK1 122 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Tcrg-V4A0A0B4J1J8 138 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Vmn1r149E9PWL6 307 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Vmn1r101E9Q365 307 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Vmn1r158G3UY92 307 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Reg1P43137 165 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 H60bB1B212 251 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Adamts17E9Q4D1 1122 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 H2-Ab1P01921 265 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Lgals1P16045 135 aaKnown RBP12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Trdv4Q5R1A3 115 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 F930015N05RikQ8C3A3 210 aa12.58□□□□□ -0.4
Upf1-202ENSMUST00000215817 Arid1bE9Q4N7 2244 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Irf2bp2E9Q1P8 570 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Spink11Q09TK7 88 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr148Q60887 310 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Vdac1Q60932 296 aaKnown RBP12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Vmn1r235Q8R297 328 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr33Q8VGX7 318 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Rnf125Q9D9R0 233 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bmP10854 126 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bhQ64478 126 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist2h2bbQ64525 126 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Gm5148Q8BGG2 154 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Spsb4Q8R5B6 273 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Sfxn4Q925N1 313 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Igkv1-133A0A0B4J1H8 120 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Dkk1O54908 272 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Olfr1413Q8VGU3 323 aa12.57□□□□□ -0.4
Upf1-202ENSMUST00000215817 Defa37K9J724 93 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Defa5P28312 93 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Rpl30P62889 115 aaKnown RBP12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 YrdcQ3U5F4 280 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Dynlrb2Q9DAJ5 96 aa12.56□□□□□ -0.4
Upf1-202ENSMUST00000215817 Trav13n-4A0A0G2JG01 110 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms