Protein–RNA interactions for Protein: P0C7A0

Khdc1b, KH homology domain-containing protein 1B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1bP0C7A0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Khdc1bP0C7A0 Gm25239-201ENSMUST00000174915 86 ntBASIC26.68■■□□□ 1.86
Khdc1bP0C7A0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Khdc1bP0C7A0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Khdc1bP0C7A0 Psd-208ENSMUST00000224556 2034 ntBASIC25.17■■□□□ 1.62
Khdc1bP0C7A0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Khdc1bP0C7A0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Khdc1bP0C7A0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Khdc1bP0C7A0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Khdc1bP0C7A0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Khdc1bP0C7A0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Khdc1bP0C7A0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Khdc1bP0C7A0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Khdc1bP0C7A0 Gm15042-201ENSMUST00000120212 883 ntBASIC24.05■■□□□ 1.44
Khdc1bP0C7A0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Khdc1bP0C7A0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Khdc1bP0C7A0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.9■■□□□ 1.42
Khdc1bP0C7A0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Khdc1bP0C7A0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Khdc1bP0C7A0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Khdc1bP0C7A0 Gm15045-201ENSMUST00000117359 883 ntBASIC23.61■■□□□ 1.37
Khdc1bP0C7A0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Khdc1bP0C7A0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Khdc1bP0C7A0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Khdc1bP0C7A0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc1bP0C7A0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Khdc1bP0C7A0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Khdc1bP0C7A0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Khdc1bP0C7A0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Khdc1bP0C7A0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Khdc1bP0C7A0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Khdc1bP0C7A0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.11■■□□□ 1.29
Khdc1bP0C7A0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Khdc1bP0C7A0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.04■■□□□ 1.28
Khdc1bP0C7A0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.97■■□□□ 1.27
Khdc1bP0C7A0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Khdc1bP0C7A0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Khdc1bP0C7A0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Khdc1bP0C7A0 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.79■■□□□ 1.24
Khdc1bP0C7A0 Gm24109-201ENSMUST00000175489 103 ntBASIC22.77■■□□□ 1.24
Khdc1bP0C7A0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Khdc1bP0C7A0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.7■■□□□ 1.22
Khdc1bP0C7A0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Khdc1bP0C7A0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.63■■□□□ 1.21
Khdc1bP0C7A0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Khdc1bP0C7A0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Khdc1bP0C7A0 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.45■■□□□ 1.18
Khdc1bP0C7A0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Khdc1bP0C7A0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Khdc1bP0C7A0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Khdc1bP0C7A0 Gm23366-201ENSMUST00000175022 89 ntBASIC22.39■■□□□ 1.17
Khdc1bP0C7A0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Khdc1bP0C7A0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Khdc1bP0C7A0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Khdc1bP0C7A0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Khdc1bP0C7A0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Khdc1bP0C7A0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Khdc1bP0C7A0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Khdc1bP0C7A0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Khdc1bP0C7A0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Khdc1bP0C7A0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Khdc1bP0C7A0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Khdc1bP0C7A0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Khdc1bP0C7A0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.14■■□□□ 1.13
Khdc1bP0C7A0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.12■■□□□ 1.13
Khdc1bP0C7A0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Khdc1bP0C7A0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Khdc1bP0C7A0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Khdc1bP0C7A0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Khdc1bP0C7A0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.11
Khdc1bP0C7A0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Khdc1bP0C7A0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Khdc1bP0C7A0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Khdc1bP0C7A0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Khdc1bP0C7A0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Khdc1bP0C7A0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Khdc1bP0C7A0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Khdc1bP0C7A0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Khdc1bP0C7A0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Khdc1bP0C7A0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Khdc1bP0C7A0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Khdc1bP0C7A0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc1bP0C7A0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Khdc1bP0C7A0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Khdc1bP0C7A0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc1bP0C7A0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Khdc1bP0C7A0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Khdc1bP0C7A0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Khdc1bP0C7A0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Khdc1bP0C7A0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Khdc1bP0C7A0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Khdc1bP0C7A0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Khdc1bP0C7A0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Khdc1bP0C7A0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.42■■□□□ 1.02
Khdc1bP0C7A0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Khdc1bP0C7A0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Khdc1bP0C7A0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Khdc1bP0C7A0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Khdc1bP0C7A0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.32■■□□□ 1
Khdc1bP0C7A0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms