Protein–RNA interactions for Protein: P0C7A0

Khdc1b, KH homology domain-containing protein 1B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1bP0C7A0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Khdc1bP0C7A0 Gm25239-201ENSMUST00000174915 86 ntBASIC26,68■■□□□ 1,86
Khdc1bP0C7A0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Khdc1bP0C7A0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,92■■□□□ 1,74
Khdc1bP0C7A0 Psd-208ENSMUST00000224556 2034 ntBASIC25,17■■□□□ 1,62
Khdc1bP0C7A0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,88■■□□□ 1,57
Khdc1bP0C7A0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,71■■□□□ 1,55
Khdc1bP0C7A0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Khdc1bP0C7A0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,45■■□□□ 1,51
Khdc1bP0C7A0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,34■■□□□ 1,49
Khdc1bP0C7A0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,11■■□□□ 1,45
Khdc1bP0C7A0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Khdc1bP0C7A0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Khdc1bP0C7A0 Gm15042-201ENSMUST00000120212 883 ntBASIC24,05■■□□□ 1,44
Khdc1bP0C7A0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Khdc1bP0C7A0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Khdc1bP0C7A0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,9■■□□□ 1,42
Khdc1bP0C7A0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Khdc1bP0C7A0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,64■■□□□ 1,38
Khdc1bP0C7A0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,62■■□□□ 1,37
Khdc1bP0C7A0 Gm15045-201ENSMUST00000117359 883 ntBASIC23,61■■□□□ 1,37
Khdc1bP0C7A0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Khdc1bP0C7A0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,42■■□□□ 1,34
Khdc1bP0C7A0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,3■■□□□ 1,32
Khdc1bP0C7A0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,26■■□□□ 1,31
Khdc1bP0C7A0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Khdc1bP0C7A0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,2■■□□□ 1,3
Khdc1bP0C7A0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,19■■□□□ 1,3
Khdc1bP0C7A0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,18■■□□□ 1,3
Khdc1bP0C7A0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Khdc1bP0C7A0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,13■■□□□ 1,29
Khdc1bP0C7A0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,11■■□□□ 1,29
Khdc1bP0C7A0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Khdc1bP0C7A0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,04■■□□□ 1,28
Khdc1bP0C7A0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,97■■□□□ 1,27
Khdc1bP0C7A0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,96■■□□□ 1,27
Khdc1bP0C7A0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,24
Khdc1bP0C7A0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Khdc1bP0C7A0 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,79■■□□□ 1,24
Khdc1bP0C7A0 Gm24109-201ENSMUST00000175489 103 ntBASIC22,77■■□□□ 1,24
Khdc1bP0C7A0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
Khdc1bP0C7A0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,7■■□□□ 1,22
Khdc1bP0C7A0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Khdc1bP0C7A0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,63■■□□□ 1,21
Khdc1bP0C7A0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,56■■□□□ 1,2
Khdc1bP0C7A0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,55■■□□□ 1,2
Khdc1bP0C7A0 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,45■■□□□ 1,18
Khdc1bP0C7A0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,44■■□□□ 1,18
Khdc1bP0C7A0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Khdc1bP0C7A0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,39■■□□□ 1,18
Khdc1bP0C7A0 Gm23366-201ENSMUST00000175022 89 ntBASIC22,39■■□□□ 1,17
Khdc1bP0C7A0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,38■■□□□ 1,17
Khdc1bP0C7A0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Khdc1bP0C7A0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Khdc1bP0C7A0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Khdc1bP0C7A0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,26■■□□□ 1,15
Khdc1bP0C7A0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,25■■□□□ 1,15
Khdc1bP0C7A0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Khdc1bP0C7A0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Khdc1bP0C7A0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,18■■□□□ 1,14
Khdc1bP0C7A0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Khdc1bP0C7A0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22,16■■□□□ 1,14
Khdc1bP0C7A0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,14■■□□□ 1,14
Khdc1bP0C7A0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,14■■□□□ 1,13
Khdc1bP0C7A0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,12■■□□□ 1,13
Khdc1bP0C7A0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
Khdc1bP0C7A0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,09■■□□□ 1,13
Khdc1bP0C7A0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
Khdc1bP0C7A0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,02■■□□□ 1,12
Khdc1bP0C7A0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22,02■■□□□ 1,11
Khdc1bP0C7A0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,01■■□□□ 1,11
Khdc1bP0C7A0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Khdc1bP0C7A0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,96■■□□□ 1,11
Khdc1bP0C7A0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,96■■□□□ 1,11
Khdc1bP0C7A0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,94■■□□□ 1,1
Khdc1bP0C7A0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,89■■□□□ 1,09
Khdc1bP0C7A0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21,88■■□□□ 1,09
Khdc1bP0C7A0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,85■■□□□ 1,09
Khdc1bP0C7A0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,08
Khdc1bP0C7A0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Khdc1bP0C7A0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,77■■□□□ 1,07
Khdc1bP0C7A0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21,67■■□□□ 1,06
Khdc1bP0C7A0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
Khdc1bP0C7A0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,66■■□□□ 1,06
Khdc1bP0C7A0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,63■■□□□ 1,05
Khdc1bP0C7A0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,62■■□□□ 1,05
Khdc1bP0C7A0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,52■■□□□ 1,04
Khdc1bP0C7A0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21,5■■□□□ 1,03
Khdc1bP0C7A0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21,49■■□□□ 1,03
Khdc1bP0C7A0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Khdc1bP0C7A0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Khdc1bP0C7A0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21,43■■□□□ 1,02
Khdc1bP0C7A0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Khdc1bP0C7A0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,42■■□□□ 1,02
Khdc1bP0C7A0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,02
Khdc1bP0C7A0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21,39■■□□□ 1,01
Khdc1bP0C7A0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,35■■□□□ 1,01
Khdc1bP0C7A0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,34■■□□□ 1,01
Khdc1bP0C7A0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21,32■■□□□ 1
Khdc1bP0C7A0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms