RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Rhox8Q6VSS7 320 aa28.79■■■□□ 2.2
Upf1-202ENSMUST00000215817 NischQ80TM9 1593 aa28.03■■■□□ 2.08
Upf1-202ENSMUST00000215817 Abcc9P70170 1546 aa26.6■■□□□ 1.85
Upf1-202ENSMUST00000215817 Ccdc136Q3TVA9 1136 aa26.23■■□□□ 1.79
Upf1-202ENSMUST00000215817 Abcc8B2RUS7 1588 aa26.21■■□□□ 1.79
Upf1-202ENSMUST00000215817 Gm35339A0A140LHH9 1649 aa26.03■■□□□ 1.76
Upf1-202ENSMUST00000215817 Esf1Q3V1V3 845 aaKnown RBP25.78■■□□□ 1.72
Upf1-202ENSMUST00000215817 Cngb1E1AZ71 1325 aa25.53■■□□□ 1.68
Upf1-202ENSMUST00000215817 Trim41Q5NCC3 630 aa25.39■■□□□ 1.66
Upf1-202ENSMUST00000215817 Zcchc6Q5BLK4 1491 aaKnown RBP25.26■■□□□ 1.63
Upf1-202ENSMUST00000215817 Gab3Q8BSM5 595 aa24.94■■□□□ 1.58
Upf1-202ENSMUST00000215817 Zeb1Q64318 1117 aa24.79■■□□□ 1.56
Upf1-202ENSMUST00000215817 Il27Q8K3I6 234 aa24.7■■□□□ 1.54
Upf1-202ENSMUST00000215817 NacadQ5SWP3 1504 aa24.67■■□□□ 1.54
Upf1-202ENSMUST00000215817 Npm2Q80W85 207 aa24.67■■□□□ 1.54
Upf1-202ENSMUST00000215817 Ehmt2Q9Z148 1263 aaKnown RBP24.62■■□□□ 1.53
Upf1-202ENSMUST00000215817 Rb1cc1Q9ESK9 1588 aa24.54■■□□□ 1.52
Upf1-202ENSMUST00000215817 Myt1lP97500 1187 aa24.51■■□□□ 1.51
Upf1-202ENSMUST00000215817 Kdm5dQ62240 1548 aa24.41■■□□□ 1.5
Upf1-202ENSMUST00000215817 ScribQ80U72 1612 aa24.16■■□□□ 1.46
Upf1-202ENSMUST00000215817 Npm1Q61937 292 aaKnown RBP24■■□□□ 1.43
Upf1-202ENSMUST00000215817 Baz1aO88379 1555 aa23.99■■□□□ 1.43
Upf1-202ENSMUST00000215817 Rpgrip1Q9EPQ2 1331 aa23.95■■□□□ 1.42
Upf1-202ENSMUST00000215817 Ccdc180J3QNE4 1664 aa23.94■■□□□ 1.42
Upf1-202ENSMUST00000215817 Ubl4bQ9CQ84 188 aa23.94■■□□□ 1.42
Upf1-202ENSMUST00000215817 Brd4Q9ESU6 1400 aaKnown RBP23.92■■□□□ 1.42
Upf1-202ENSMUST00000215817 Dcaf1Q80TR8 1506 aa23.91■■□□□ 1.42
Upf1-202ENSMUST00000215817 Rtl1Q7M732 1744 aa23.91■■□□□ 1.42
Upf1-202ENSMUST00000215817 HrcG5E8J6 738 aa23.88■■□□□ 1.41
Upf1-202ENSMUST00000215817 Sycp2Q9CUU3 1500 aa23.81■■□□□ 1.4
Upf1-202ENSMUST00000215817 Ube2uB1AUC4 352 aa23.76■■□□□ 1.39
Upf1-202ENSMUST00000215817 Ap3b1Q9Z1T1 1105 aa23.62■■□□□ 1.37
Upf1-202ENSMUST00000215817 Chic1Q8CBW7 227 aa23.53■■□□□ 1.36
Upf1-202ENSMUST00000215817 UbtfP25976 765 aaKnown RBP23.53■■□□□ 1.36
Upf1-202ENSMUST00000215817 Ercc6F8VPZ5 1481 aa23.47■■□□□ 1.35
Upf1-202ENSMUST00000215817 Pds5bQ4VA53 1446 aaKnown RBP23.46■■□□□ 1.35
Upf1-202ENSMUST00000215817 Kif15Q6P9L6 1387 aa23.33■■□□□ 1.33
Upf1-202ENSMUST00000215817 Cecr2E9Q2Z1 1453 aa23.27■■□□□ 1.31
Upf1-202ENSMUST00000215817 Ifnlr1Q8CGK5 535 aa23.22■■□□□ 1.31
Upf1-202ENSMUST00000215817 Las1lA2BE28 776 aaKnown RBP23.22■■□□□ 1.31
Upf1-202ENSMUST00000215817 Rsf1E9PWW9 1441 aaKnown RBP23.21■■□□□ 1.31
Upf1-202ENSMUST00000215817 Crybg2B7ZCC2 1516 aa23.19■■□□□ 1.3
Upf1-202ENSMUST00000215817 Lmod2Q3UHZ5 550 aa23.12■■□□□ 1.29
Upf1-202ENSMUST00000215817 Golga3P55937 1487 aa23.1■■□□□ 1.29
Upf1-202ENSMUST00000215817 Fkbp15Q6P9Q6 1216 aaKnown RBP23.09■■□□□ 1.29
Upf1-202ENSMUST00000215817 Pelp1Q9DBD5 1123 aaKnown RBP23.08■■□□□ 1.29
Upf1-202ENSMUST00000215817 Atad2bE9Q166 1460 aaKnown RBP23.06■■□□□ 1.28
Upf1-202ENSMUST00000215817 Fam50aQ9WV03 339 aaKnown RBP23.04■■□□□ 1.28
Upf1-202ENSMUST00000215817 Plekhg3Q4VAC9 1341 aa22.98■■□□□ 1.27
Upf1-202ENSMUST00000215817 Smarca2Q6DIC0 1577 aa22.95■■□□□ 1.26
Upf1-202ENSMUST00000215817 CftrP26361 1476 aa22.94■■□□□ 1.26
Upf1-202ENSMUST00000215817 Wdr66E9Q743 1299 aa22.92■■□□□ 1.26
Upf1-202ENSMUST00000215817 Cep164Q5DU05 1446 aa22.91■■□□□ 1.26
Upf1-202ENSMUST00000215817 Ccdc18Q640L5 1455 aa22.86■■□□□ 1.25
Upf1-202ENSMUST00000215817 Phldb1Q6PDH0 1371 aaKnown RBP22.85■■□□□ 1.25
Upf1-202ENSMUST00000215817 Smarca4Q3TKT4 1613 aaKnown RBP22.85■■□□□ 1.25
Upf1-202ENSMUST00000215817 Synj1Q8CHC4 1574 aa22.76■■□□□ 1.23
Upf1-202ENSMUST00000215817 Zbtb7cQ8VCZ7 619 aa22.76■■□□□ 1.23
Upf1-202ENSMUST00000215817 BicraF8VPZ9 1578 aa22.76■■□□□ 1.23
Upf1-202ENSMUST00000215817 Cux2P70298 1426 aa22.73■■□□□ 1.23
Upf1-202ENSMUST00000215817 Clip1Q922J3 1391 aa22.69■■□□□ 1.22
Upf1-202ENSMUST00000215817 Iqgap2Q3UQ44 1575 aa22.69■■□□□ 1.22
Upf1-202ENSMUST00000215817 Ttbk1Q6PCN3 1308 aa22.67■■□□□ 1.22
Upf1-202ENSMUST00000215817 Ccdc88bQ4QRL3 1481 aa22.65■■□□□ 1.22
Upf1-202ENSMUST00000215817 Plppr3Q7TPB0 716 aa22.65■■□□□ 1.22
Upf1-202ENSMUST00000215817 Dnajc5bQ9CQ94 199 aa22.65■■□□□ 1.22
Upf1-202ENSMUST00000215817 Arhgap27A2AB59 869 aa22.56■■□□□ 1.2
Upf1-202ENSMUST00000215817 Acin1Q9JIX8 1338 aaKnown RBP22.56■■□□□ 1.2
Upf1-202ENSMUST00000215817 Neurod1Q60867 357 aa22.53■■□□□ 1.2
Upf1-202ENSMUST00000215817 Hnrnpul2Q00PI9 745 aaKnown RBP22.5■■□□□ 1.19
Upf1-202ENSMUST00000215817 Fmn1Q05860 1466 aa22.49■■□□□ 1.19
Upf1-202ENSMUST00000215817 NefmP08553 848 aa22.49■■□□□ 1.19
Upf1-202ENSMUST00000215817 Cttnbp2B9EJA2 1648 aa22.46■■□□□ 1.19
Upf1-202ENSMUST00000215817 Setd5Q5XJV7 1441 aa22.45■■□□□ 1.18
Upf1-202ENSMUST00000215817 NclP09405 707 aaKnown RBP22.44■■□□□ 1.18
Upf1-202ENSMUST00000215817 Mier1Q5UAK0 511 aa22.41■■□□□ 1.18
Upf1-202ENSMUST00000215817 BlmO88700 1416 aa22.34■■□□□ 1.17
Upf1-202ENSMUST00000215817 Frmpd1A2AKB4 1549 aa22.31■■□□□ 1.16
Upf1-202ENSMUST00000215817 LrpprcQ6PB66 1392 aaKnown RBP22.29■■□□□ 1.16
Upf1-202ENSMUST00000215817 Dhx29Q6PGC1 1365 aaKnown RBP22.28■■□□□ 1.16
Upf1-202ENSMUST00000215817 Slc24a1Q91WD8 1130 aa22.27■■□□□ 1.16
Upf1-202ENSMUST00000215817 Os9Q8K2C7 672 aa22.27■■□□□ 1.16
Upf1-202ENSMUST00000215817 Chic2Q9D9G3 165 aa22.27■■□□□ 1.16
Upf1-202ENSMUST00000215817 Gm13697A2AK42 830 aa22.26■■□□□ 1.15
Upf1-202ENSMUST00000215817 AknaQ80VW7 1404 aa22.2■■□□□ 1.14
Upf1-202ENSMUST00000215817 Eid3Q3V124 375 aa22.2■■□□□ 1.14
Upf1-202ENSMUST00000215817 CenpbP27790 599 aa22.18■■□□□ 1.14
Upf1-202ENSMUST00000215817 Erich6D3Z6S9 713 aa22.16■■□□□ 1.14
Upf1-202ENSMUST00000215817 Eea1Q8BL66 1411 aa22.14■■□□□ 1.13
Upf1-202ENSMUST00000215817 Baz1bQ9Z277 1479 aa22.13■■□□□ 1.13
Upf1-202ENSMUST00000215817 Ppargc1bQ8VHJ7 1014 aa22.13■■□□□ 1.13
Upf1-202ENSMUST00000215817 Pcgf6Q99NA9 353 aa22.13■■□□□ 1.13
Upf1-202ENSMUST00000215817 Cep162Q6ZQ06 1403 aa22.1■■□□□ 1.13
Upf1-202ENSMUST00000215817 Cc2d2aQ8CFW7 1633 aa22.09■■□□□ 1.13
Upf1-202ENSMUST00000215817 Arid3cA6PWV5 409 aa22.06■■□□□ 1.12
Upf1-202ENSMUST00000215817 Rpap1Q80TE0 1409 aa22.05■■□□□ 1.12
Upf1-202ENSMUST00000215817 Wdr62Q3U3T8 1523 aa22.04■■□□□ 1.12
Upf1-202ENSMUST00000215817 Mrc2Q64449 1479 aa22.04■■□□□ 1.12
Upf1-202ENSMUST00000215817 TonslQ6NZL6 1363 aa22■■□□□ 1.11
Upf1-202ENSMUST00000215817 Zbtb4Q5F293 982 aa21.98■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms