RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G RNQ1P25367 405 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G RRT12P25381 491 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G SIN4P32259 974 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G PIN4P34217 668 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
tC(GCA)GtC(GCA)G URA8P38627 578 aaPredicted RBP3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G YJR054WP47114 497 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G YGR153WP48238 217 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G PRP24P49960 444 aaKnown RBP3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G AMA1P50082 593 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G MZM1Q03429 123 aaPredicted RBP3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G SIZ1Q04195 904 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G YDR338CQ05497 695 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G SIL1Q08199 421 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G ABP140Q08641 628 aaKnown RBP3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G YLR046CQ12253 270 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G PTC5Q12511 572 aa3.39□□□□□ -1.87
tC(GCA)GtC(GCA)G DAL81P21657 970 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G VBA3P25594 458 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G GEX1P25596 615 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G HEM12P32347 362 aaPredicted RBP3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G PLC1P32383 869 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G VBA5P36172 582 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G GEX2P36173 615 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G PPS1P38148 807 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G SEA4P38164 1038 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G GPI16P38875 610 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G KAP123P40069 1113 aaKnown RBP3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G BUD6P41697 788 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G BST1P43571 1029 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G PFD1P46988 109 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G SMC3P47037 1230 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G TBF1Q02457 562 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G VID22Q05934 901 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G DIC1Q06143 298 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G YDL218WQ07629 317 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G HMI1Q12039 706 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G RRP6Q12149 733 aaKnown RBP3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G YOL098CQ12496 1037 aa3.38□□□□□ -1.87
tC(GCA)GtC(GCA)G RPL17AP05740 184 aaKnown RBP3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G SSA3P09435 649 aaKnown RBP3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G TRL1P09880 827 aaKnown RBP3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G PYC1P11154 1178 aaKnown RBP3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G SEC62P21825 274 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G CPR3P25719 182 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G CBF2P32504 956 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G SIS2P36024 562 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G YBR053CP38235 358 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G YHL008CP38750 627 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G SMF1P38925 575 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G NUP82P40368 713 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G ZIM17P42844 174 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G RPL17BP46990 184 aaKnown RBP3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G YJR079WP47126 109 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G FDC1Q03034 503 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G ESC2Q06340 456 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G CUR1Q06469 252 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G YOR296WQ08748 1289 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G NEW1Q08972 1196 aaKnown RBP3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G SVS1Q12254 260 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G HSP42Q12329 375 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G CEX1Q12453 761 aa3.37□□□□□ -1.87
tC(GCA)GtC(GCA)G CYR1P08678 2026 aaKnown RBP3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G CDC24P11433 854 aaPredicted RBP3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G PHO8P11491 566 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G CBP3P21560 335 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G FBP26P32604 452 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G SEC6P32844 805 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G TAF14P35189 244 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G STL1P39932 569 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G FTR1P40088 404 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G MAD1P40957 749 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G YML082WQ04533 649 aaKnown RBP3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G DFG5Q05031 458 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G EIS1Q05050 843 aaKnown RBP3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G PMT7Q06644 662 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
tC(GCA)GtC(GCA)G CBC2Q08920 208 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
tC(GCA)GtC(GCA)G YPL277CQ08989 487 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G HUA2Q12134 243 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G HER1Q12276 1246 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G ARP7Q12406 477 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G UBR1P19812 1950 aa3.36□□□□□ -1.87
tC(GCA)GtC(GCA)G TUB1P09733 447 aaKnown RBP3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G NAT1P12945 854 aaKnown RBP3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G ISY1P21374 235 aaPredicted RBP3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G MKK1P32490 508 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G NAB2P32505 525 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
tC(GCA)GtC(GCA)G SPT16P32558 1035 aaKnown RBP3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G APM3P38153 483 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G YHR210CP38893 341 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G YER130CP39959 443 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G PRK1P40494 810 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G NUP85P46673 744 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G MRX6P48564 524 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G AIM14P53109 570 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G NNF2P53253 936 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G PRM1P53835 661 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G VAC7P53950 1165 aa3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G EGD1Q02642 157 aaKnown RBP3.35□□□□□ -1.87
tC(GCA)GtC(GCA)G TIP41Q12199 356 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms