RNA–Protein interactions for RNA: YPL226W

NEW1, Transcript of ATP binding cassette protein, yeast

Gene NEW1, Length 3,591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEW1	YPL226W	PFD1	P46988	109 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	MND1	P53102	219 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	YGL036W	P53185	909 aa	Predicted RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	COG4	Q06096	861 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	SPP382	Q06411	708 aa	Predicted RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	TRE1	Q08919	783 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	DDC1	Q08949	612 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	LSP1	Q12230	341 aa	Known RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	BI4	P03879	638 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	BCD1	P38772	366 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	CEM1	P39525	442 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	GDH3	P39708	457 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	ERG10	P41338	398 aa	Known RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	UFE1	P41834	346 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	DRN1	P53255	507 aa	Known RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	CUZ1	P53899	274 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	KRE33	P53914	1056 aa	Known RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	ESC2	Q06340	456 aa		2.69	□□□□□ -1.98
NEW1	YPL226W	RCL1	Q08096	367 aa	Predicted RBP	2.69	□□□□□ -1.98
NEW1	YPL226W	SGE1	P33335	543 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	YMC2	P38087	329 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	PPM1	Q04081	328 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	EAF1	Q06337	982 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	YOL075C	Q08234	1294 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	ECM3	Q99252	613 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	JIP3	O13555	125 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	MSF1	P08425	469 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	PSO2	P30620	661 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	ECM13	P38195	257 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	PIK1	P39104	1066 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	HFM1	P51979	1187 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	NUP84	P52891	726 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	COQ6	P53318	479 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	SMA1	Q02651	245 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	TLG1	Q03322	224 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	VPS60	Q03390	229 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	YMR265C	Q03508	461 aa	Known RBP	2.68	□□□□□ -1.98
NEW1	YPL226W	RTN1	Q04947	295 aa	Known RBP	2.68	□□□□□ -1.98
NEW1	YPL226W	HRD3	Q05787	833 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	YLR297W	Q05899	129 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	CSR1	Q06705	408 aa	Known RBP	2.68	□□□□□ -1.98
NEW1	YPL226W	YOR387C	Q08910	206 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	DDP1	Q99321	188 aa	Known RBP	2.68	□□□□□ -1.98
NEW1	YPL226W	AI5_BETA	Q9ZZX0	354 aa		2.68	□□□□□ -1.98
NEW1	YPL226W	APL1	P27351	700 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	ZUO1	P32527	433 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	STE13	P33894	931 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	CSG2	P35206	410 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	YBR053C	P38235	358 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	YPT35	P38815	214 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	YPT11	P48559	417 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	YGR237C	P50089	785 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	FLC3	P53121	802 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	RSC1	P53236	928 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
NEW1	YPL226W	CLU1	Q03690	1277 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	PMT7	Q06644	662 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
NEW1	YPL226W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
NEW1	YPL226W	DIT1	P21623	536 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	AEP2	P22136	580 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	TFB1	P32776	642 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	ELM1	P32801	640 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	RIO2	P40160	425 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	PSY2	P40164	858 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	DSN1	P40568	576 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	CIR1	P42940	261 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	COP1	P53622	1201 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	GPD1	Q00055	391 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	TAF9	Q05027	157 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	ECM38	Q05902	660 aa	Predicted RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	APL5	Q08951	932 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	SVS1	Q12254	260 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	PPR1	P07272	904 aa	Predicted RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	YER152C	P10356	443 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	HSF1	P10961	833 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	KAR3	P17119	729 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	DAL2	P25335	343 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	CCR4	P31384	837 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	DUN1	P39009	513 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	BDH2	P39713	417 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	YJR061W	P40355	935 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	CCT5	P40413	562 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	UBP7	P40453	1071 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	HYR1	P40581	163 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	PYK2	P52489	506 aa	Known RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	HST1	P53685	503 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	TDA7	P53882	636 aa	Predicted RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	ARO80	Q04052	950 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	SPG3	Q04398	127 aa	Predicted RBP	2.67	□□□□□ -1.98
NEW1	YPL226W	MDM38	Q08179	573 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	VPS54	Q12071	889 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	ARP7	Q12406	477 aa		2.67	□□□□□ -1.98
NEW1	YPL226W	RAD3	P06839	778 aa		2.66	□□□□□ -1.98
NEW1	YPL226W	RDS2	P19541	446 aa	Known RBP	2.66	□□□□□ -1.98
NEW1	YPL226W	SAP190	P36123	1033 aa		2.66	□□□□□ -1.98
NEW1	YPL226W	BAT1	P38891	393 aa	Known RBP	2.66	□□□□□ -1.98
NEW1	YPL226W	PET100	P38958	111 aa		2.66	□□□□□ -1.98
NEW1	YPL226W	YER130C	P39959	443 aa		2.66	□□□□□ -1.98
NEW1	YPL226W	YJR079W	P47126	109 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms