RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	YPQ2	Q06328	317 aa		4.57	□□□□□ -1.68
TRM44	YPL030W	YEH2	Q07950	538 aa		4.57	□□□□□ -1.68
TRM44	YPL030W	THP3	Q12049	470 aa	Known RBP	4.57	□□□□□ -1.68
TRM44	YPL030W	VPS54	Q12071	889 aa		4.57	□□□□□ -1.68
TRM44	YPL030W	AEP3	Q12089	606 aa		4.57	□□□□□ -1.68
TRM44	YPL030W	LYS2	P07702	1392 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	CET1	O13297	549 aa	Predicted RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	HIS4	P00815	799 aa	Known RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	CBP2	P03874	630 aa	Predicted RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	CHO2	P05374	869 aa	Known RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	SBP1	P10080	294 aa	Known RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	SEC63	P14906	663 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	ARG8	P18544	423 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	DAL7	P21826	554 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	ESS1	P22696	170 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	RAD57	P25301	460 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	RRP43	P25359	394 aa	Predicted RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	PXL1	P36166	706 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	NOP4	P37838	685 aa	Known RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	CCZ1	P38273	704 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	PEX32	P38292	413 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	MSG5	P38590	489 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	RAD55	P38953	406 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	MSS4	P38994	779 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	YER184C	P39961	794 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	BNA3	P47039	444 aa	Known RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	HFM1	P51979	1187 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	YGR125W	P53273	1036 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	SOL4	P53315	255 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	RPL34A	P87262	121 aa	Predicted RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	SEN54	Q02825	467 aa	Predicted RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	YMR114C	Q04471	368 aa	Known RBP	4.56	□□□□□ -1.68
TRM44	YPL030W	SFH1	Q06168	426 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	ATG23	Q06671	453 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	YDL114W	Q07530	308 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	GPI13	Q07830	1017 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	NSE1	Q07913	336 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	YAP7	Q08182	245 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	YPR204W	Q08995	1032 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	ATG2	P53855	1592 aa		4.56	□□□□□ -1.68
TRM44	YPL030W	STE3	P06783	470 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	RNR2	P09938	399 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	YGL041W-A	P0C5N3	154 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	SNA3	P14359	133 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	ATE1	P16639	503 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	FUS3	P16892	353 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	DBP5	P20449	482 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	NAM9	P27929	486 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	BIO2	P32451	375 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	HXT3	P32466	567 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	MKS1	P34072	584 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	KTR4	P38131	464 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	SUR2	P38992	349 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	AIM2	P39721	246 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	DDI1	P40087	428 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	PDS1	P40316	373 aa	Predicted RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	HPM1	P40481	377 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	SLM1	P40485	686 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	ARF3	P40994	183 aa	RIP-Chip data	4.55	□□□□□ -1.68	not detected
TRM44	YPL030W	BRO1	P48582	844 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	NCS6	P53088	359 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	MLC1	P53141	149 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	GCN5	Q03330	439 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	HER2	Q03557	464 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	SND1	Q04007	877 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	RTN1	Q04947	295 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	ISR1	Q06098	443 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	SGD1	Q06132	899 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	VAC14	Q06708	880 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	RPN8	Q08723	338 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	APL4	Q12028	832 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	BAG7	Q12128	409 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	HUA2	Q12134	243 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	LAG2	Q92325	660 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	APM4	Q99186	491 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	MDS3	P53094	1487 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	MET6	P05694	767 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	PHO8	P11491	566 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	OM45	P16547	393 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	RPL8A	P17076	256 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	YPK2	P18961	677 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	UBC1	P21734	215 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	RPL8B	P29453	256 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	CHS3	P29465	1165 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	NAM7	P30771	971 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	SIN4	P32259	974 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	SSH4	P32343	579 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	CDC12	P32468	407 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	LYP1	P32487	611 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	TFB1	P32776	642 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	APM3	P38153	483 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	RFS1	P38234	210 aa	Known RBP	4.55	□□□□□ -1.68
TRM44	YPL030W	SWC5	P38326	303 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	OSH7	P38755	437 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	TMA108	P40462	946 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	YRB2	P40517	327 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	AXL1	P40851	1208 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	FAR7	P43592	221 aa		4.55	□□□□□ -1.68
TRM44	YPL030W	LIA1	P47120	325 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms