RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W RPA49Q01080 415 aaPredicted RBP4.91□□□□□ -1.62
RPP0YLR340W PIR3Q03180 325 aa4.91□□□□□ -1.62
RPP0YLR340W HRD3Q05787 833 aa4.91□□□□□ -1.62
RPP0YLR340W ECM38Q05902 660 aaPredicted RBP4.91□□□□□ -1.62
RPP0YLR340W RLP24Q07915 199 aaKnown RBP4.91□□□□□ -1.62
RPP0YLR340W RCL1Q08096 367 aaPredicted RBP4.91□□□□□ -1.62
RPP0YLR340W SLX4Q12098 748 aa4.91□□□□□ -1.62
RPP0YLR340W TRA1P38811 3744 aa4.9□□□□□ -1.62
RPP0YLR340W CDC42P19073 191 aa4.9□□□□□ -1.63
RPP0YLR340W COX11P19516 300 aaKnown RBP4.9□□□□□ -1.63
RPP0YLR340W HIR1P32479 840 aa4.9□□□□□ -1.63
RPP0YLR340W AHP1P38013 176 aaKnown RBP4.9□□□□□ -1.63
RPP0YLR340W MAL33P38157 468 aa4.9□□□□□ -1.63
RPP0YLR340W SAK1P38990 1142 aa4.9□□□□□ -1.63
RPP0YLR340W PSY2P40164 858 aa4.9□□□□□ -1.63
RPP0YLR340W TIF34P40217 347 aaKnown RBP4.9□□□□□ -1.63
RPP0YLR340W COQ5P49017 307 aa4.9□□□□□ -1.63
RPP0YLR340W THI72Q08579 599 aa4.9□□□□□ -1.63
RPP0YLR340W COX3P00420 269 aa4.89□□□□□ -1.63
RPP0YLR340W ADE3P07245 946 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W ARF2P19146 181 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W ERG6P25087 383 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W BMH1P29311 267 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W PMI40P29952 429 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W CBF2P32504 956 aa4.89□□□□□ -1.63
RPP0YLR340W YKL023WP36103 277 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W MRPL40P36534 297 aa4.89□□□□□ -1.63
RPP0YLR340W CRP1P38845 465 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W ERV46P39727 415 aa4.89□□□□□ -1.63
RPP0YLR340W UBP7P40453 1071 aa4.89□□□□□ -1.63
RPP0YLR340W RSM25P40496 264 aa4.89□□□□□ -1.63
RPP0YLR340W PEX14P53112 341 aa4.89□□□□□ -1.63
RPP0YLR340W AQR1P53943 586 aa4.89□□□□□ -1.63
RPP0YLR340W ADE12P80210 433 aaKnown RBP4.89□□□□□ -1.63
RPP0YLR340W YMR206WQ03695 313 aa4.89□□□□□ -1.63
RPP0YLR340W YSH1Q06224 779 aaPredicted RBP4.89□□□□□ -1.63
RPP0YLR340W SYT1Q06836 1226 aa4.89□□□□□ -1.63
RPP0YLR340W NDD1Q08887 554 aa4.89□□□□□ -1.63
RPP0YLR340W YPL216WQ08964 1102 aa4.89□□□□□ -1.63
RPP0YLR340W AI1P03875 834 aa4.88□□□□□ -1.63
RPP0YLR340W PRP9P19736 530 aaKnown RBP4.88□□□□□ -1.63
RPP0YLR340W CDC15P27636 974 aa4.88□□□□□ -1.63
RPP0YLR340W CAP1P28495 268 aaKnown RBP4.88□□□□□ -1.63
RPP0YLR340W PYC2P32327 1180 aaKnown RBP4.88□□□□□ -1.63
RPP0YLR340W NOP4P37838 685 aaKnown RBP4.88□□□□□ -1.63
RPP0YLR340W LTP1P40347 161 aa4.88□□□□□ -1.63
RPP0YLR340W SBE2P42223 864 aaKnown RBP4.88□□□□□ -1.63
RPP0YLR340W YFL066CP43538 392 aa4.88□□□□□ -1.63
RPP0YLR340W TOS3P43637 560 aa4.88□□□□□ -1.63
RPP0YLR340W PFD1P46988 109 aa4.88□□□□□ -1.63
RPP0YLR340W CPR7P47103 393 aa4.88□□□□□ -1.63
RPP0YLR340W RIM21P48565 533 aa4.88□□□□□ -1.63
RPP0YLR340W YGR266WP53326 701 aa4.88□□□□□ -1.63
RPP0YLR340W NRM1P53718 249 aa4.88□□□□□ -1.63
RPP0YLR340W PPM1Q04081 328 aa4.88□□□□□ -1.63
RPP0YLR340W SPG3Q04398 127 aaPredicted RBP4.88□□□□□ -1.63
RPP0YLR340W YLR456WQ06199 204 aa4.88□□□□□ -1.63
RPP0YLR340W OPI10Q08202 246 aa4.88□□□□□ -1.63
RPP0YLR340W RSB1Q08417 382 aa4.88□□□□□ -1.63
RPP0YLR340W CLP1Q08685 445 aaPredicted RBP4.88□□□□□ -1.63
RPP0YLR340W TRE1Q08919 783 aa4.88□□□□□ -1.63
RPP0YLR340W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
RPP0YLR340W YIL046W-AQ3E7Z4 54 aa4.88□□□□□ -1.63
RPP0YLR340W ECM3Q99252 613 aa4.88□□□□□ -1.63
RPP0YLR340W TRS33Q99394 268 aa4.88□□□□□ -1.63
RPP0YLR340W RIP1P08067 215 aa4.87□□□□□ -1.63
RPP0YLR340W SEC63P14906 663 aa4.87□□□□□ -1.63
RPP0YLR340W EXO1P39875 702 aa4.87□□□□□ -1.63
RPP0YLR340W RSC1P53236 928 aa4.87□□□□□ -1.63
RPP0YLR340W CSL4P53859 292 aaPredicted RBP4.87□□□□□ -1.63
RPP0YLR340W TLG2Q08144 397 aa4.87□□□□□ -1.63
RPP0YLR340W APC5Q08683 685 aa4.87□□□□□ -1.63
RPP0YLR340W SAM4Q08985 325 aaKnown RBP4.87□□□□□ -1.63
RPP0YLR340W VPS54Q12071 889 aa4.87□□□□□ -1.63
RPP0YLR340W GAL4P04386 881 aa4.86□□□□□ -1.63
RPP0YLR340W RPL1AP0CX43 217 aaKnown RBP4.86□□□□□ -1.63
RPP0YLR340W RPL1BP0CX44 217 aaKnown RBP4.86□□□□□ -1.63
RPP0YLR340W STE4P18851 423 aa4.86□□□□□ -1.63
RPP0YLR340W RDS2P19541 446 aaKnown RBP4.86□□□□□ -1.63
RPP0YLR340W RDS1P25611 832 aa4.86□□□□□ -1.63
RPP0YLR340W YKL091CP33324 310 aaKnown RBP4.86□□□□□ -1.63
RPP0YLR340W YBR053CP38235 358 aa4.86□□□□□ -1.63
RPP0YLR340W YHR078WP38799 552 aa4.86□□□□□ -1.63
RPP0YLR340W ASG1P40467 964 aa4.86□□□□□ -1.63
RPP0YLR340W SER33P40510 469 aa4.86□□□□□ -1.63
RPP0YLR340W SUN4P53616 420 aa4.86□□□□□ -1.63
RPP0YLR340W YNL144CP53907 740 aa4.86□□□□□ -1.63
RPP0YLR340W SWS2P53937 143 aa4.86□□□□□ -1.63
RPP0YLR340W PMT7Q06644 662 aa4.86□□□□□ -1.63
RPP0YLR340W YFT2Q06676 274 aa4.86□□□□□ -1.63
RPP0YLR340W FAL1Q12099 399 aaKnown RBP4.86□□□□□ -1.63
RPP0YLR340W SVS1Q12254 260 aa4.86□□□□□ -1.63
RPP0YLR340W NAG1Q8TGN9 163 aa4.86□□□□□ -1.63
RPP0YLR340W CDC11P32458 415 aa4.85□□□□□ -1.63
RPP0YLR340W PRX1P34227 261 aaKnown RBP4.85□□□□□ -1.63
RPP0YLR340W SHM1P37292 490 aaPredicted RBP4.85□□□□□ -1.63
RPP0YLR340W YMC2P38087 329 aa4.85□□□□□ -1.63
RPP0YLR340W ASG7P46993 209 aa4.85□□□□□ -1.63
RPP0YLR340W AIM23P47015 356 aa4.85□□□□□ -1.63
RPP0YLR340W YJR079WP47126 109 aa4.85□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms