RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W QNS1P38795 714 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W RAD55P38953 406 aa4.78□□□□□ -1.64
CBF5YLR175W CCT4P39078 528 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W JHD1P40034 492 aa4.78□□□□□ -1.64
CBF5YLR175W TMN3P40071 706 aa4.78□□□□□ -1.64
CBF5YLR175W YFL052WP43551 465 aa4.78□□□□□ -1.64
CBF5YLR175W RSC8P43609 557 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W RPC17P47076 161 aa4.78□□□□□ -1.64
CBF5YLR175W BFA1P47113 574 aa4.78□□□□□ -1.64
CBF5YLR175W BRO1P48582 844 aa4.78□□□□□ -1.64
CBF5YLR175W SUT1P53032 299 aaKnown RBP4.78□□□□□ -1.64
CBF5YLR175W HST3P53687 447 aa4.78□□□□□ -1.64
CBF5YLR175W MUB1Q03162 620 aa4.78□□□□□ -1.64
CBF5YLR175W YMR187CQ03236 431 aa4.78□□□□□ -1.64
CBF5YLR175W ARO80Q04052 950 aa4.78□□□□□ -1.64
CBF5YLR175W ECI1Q05871 280 aa4.78□□□□□ -1.64
CBF5YLR175W AIM39Q08223 395 aa4.78□□□□□ -1.64
CBF5YLR175W TAF10Q12030 206 aa4.78□□□□□ -1.64
CBF5YLR175W VPS54Q12071 889 aa4.78□□□□□ -1.64
CBF5YLR175W MNL2Q12205 849 aa4.78□□□□□ -1.64
CBF5YLR175W SFI1Q12369 946 aa4.78□□□□□ -1.64
CBF5YLR175W Q0182Q9ZZW1 134 aa4.78□□□□□ -1.64
CBF5YLR175W YLR422WQ06409 1932 aa4.77□□□□□ -1.65
CBF5YLR175W TUB3P09734 445 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W YPK1P12688 680 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W POL3P15436 1097 aa4.77□□□□□ -1.65
CBF5YLR175W AEP2P22136 580 aa4.77□□□□□ -1.65
CBF5YLR175W RPB10P22139 70 aa4.77□□□□□ -1.65
CBF5YLR175W VMA3P25515 160 aa4.77□□□□□ -1.65
CBF5YLR175W ADK2P26364 225 aa4.77□□□□□ -1.65
CBF5YLR175W CAP1P28495 268 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W SEC1P30619 724 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W TKL2P33315 681 aa4.77□□□□□ -1.65
CBF5YLR175W SEG2P34250 1132 aa4.77□□□□□ -1.65
CBF5YLR175W MAC1P35192 417 aa4.77□□□□□ -1.65
CBF5YLR175W ABZ1P37254 787 aaPredicted RBP4.77□□□□□ -1.65
CBF5YLR175W RFS1P38234 210 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W SWC5P38326 303 aa4.77□□□□□ -1.65
CBF5YLR175W SAK1P38990 1142 aa4.77□□□□□ -1.65
CBF5YLR175W SSN3P39073 555 aa4.77□□□□□ -1.65
CBF5YLR175W ERP2P39704 215 aa4.77□□□□□ -1.65
CBF5YLR175W MMF1P40185 145 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W YNL247WP53852 767 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W SLG1P54867 378 aa4.77□□□□□ -1.65
CBF5YLR175W RPL22BP56628 122 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W ADA2Q02336 434 aa4.77□□□□□ -1.65
CBF5YLR175W YPL062WQ02781 134 aa4.77□□□□□ -1.65
CBF5YLR175W IVY1Q04934 453 aa4.77□□□□□ -1.65
CBF5YLR175W TAF9Q05027 157 aa4.77□□□□□ -1.65
CBF5YLR175W NOP6Q07623 225 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
CBF5YLR175W GPM2Q12008 311 aa4.77□□□□□ -1.65
CBF5YLR175W RIO1Q12196 484 aaKnown RBP4.77□□□□□ -1.65
CBF5YLR175W ZRT2Q12436 422 aa4.77□□□□□ -1.65
CBF5YLR175W VPS5Q92331 675 aa4.77□□□□□ -1.65
CBF5YLR175W APM4Q99186 491 aa4.77□□□□□ -1.65
CBF5YLR175W UBR2Q07963 1872 aa4.77□□□□□ -1.65
CBF5YLR175W CIT2P08679 460 aa4.76□□□□□ -1.65
CBF5YLR175W KGD2P19262 463 aaPredicted RBP4.76□□□□□ -1.65
CBF5YLR175W RPO26P20435 155 aa4.76□□□□□ -1.65
CBF5YLR175W TRX1P22217 103 aaKnown RBP4.76□□□□□ -1.65
CBF5YLR175W GYP6P32806 458 aa4.76□□□□□ -1.65
CBF5YLR175W PCA1P38360 1216 aa4.76□□□□□ -1.65
CBF5YLR175W CBR1P38626 284 aaKnown RBP4.76□□□□□ -1.65
CBF5YLR175W STB5P38699 743 aa4.76□□□□□ -1.65
CBF5YLR175W APM2P38700 605 aa4.76□□□□□ -1.65
CBF5YLR175W LYS9P38999 446 aa4.76□□□□□ -1.65
CBF5YLR175W END3P39013 349 aa4.76□□□□□ -1.65
CBF5YLR175W AAD14P42884 376 aa4.76□□□□□ -1.65
CBF5YLR175W TAF1P46677 1066 aa4.76□□□□□ -1.65
CBF5YLR175W ASG7P46993 209 aa4.76□□□□□ -1.65
CBF5YLR175W MET13P53128 600 aa4.76□□□□□ -1.65
CBF5YLR175W RIM8P53179 542 aa4.76□□□□□ -1.65
CBF5YLR175W YNL165WP53891 406 aa4.76□□□□□ -1.65
CBF5YLR175W YNL011CP53980 444 aa4.76□□□□□ -1.65
CBF5YLR175W EAR1Q03212 550 aa4.76□□□□□ -1.65
CBF5YLR175W URH1Q04179 340 aa4.76□□□□□ -1.65
CBF5YLR175W UFO1Q04511 668 aa4.76□□□□□ -1.65
CBF5YLR175W TDA9Q04545 1251 aa4.76□□□□□ -1.65
CBF5YLR175W YDR278CQ05612 105 aa4.76□□□□□ -1.65
CBF5YLR175W KAP95Q06142 861 aaKnown RBP4.76□□□□□ -1.65
CBF5YLR175W MRI1Q06489 411 aaKnown RBP4.76□□□□□ -1.65
CBF5YLR175W ATG23Q06671 453 aa4.76□□□□□ -1.65
CBF5YLR175W MDM38Q08179 573 aa4.76□□□□□ -1.65
CBF5YLR175W YOR059CQ08448 450 aaKnown RBP4.76□□□□□ -1.65
CBF5YLR175W AIM41Q12032 185 aa4.76□□□□□ -1.65
CBF5YLR175W NUR1Q12066 484 aa4.76□□□□□ -1.65
CBF5YLR175W EMP46Q12396 444 aa4.76□□□□□ -1.65
CBF5YLR175W STB3Q12427 513 aa4.76□□□□□ -1.65
CBF5YLR175W NOP58Q12499 511 aaKnown RBP4.76□□□□□ -1.65
CBF5YLR175W CDC8P00572 216 aa4.75□□□□□ -1.65
CBF5YLR175W PHO4P07270 312 aaKnown RBP4.75□□□□□ -1.65
CBF5YLR175W KAR3P17119 729 aa4.75□□□□□ -1.65
CBF5YLR175W LRE1P25579 583 aaKnown RBP4.75□□□□□ -1.65
CBF5YLR175W NFU1P32860 256 aa4.75□□□□□ -1.65
CBF5YLR175W SRB2P34162 210 aa4.75□□□□□ -1.65
CBF5YLR175W RGD1P38339 666 aa4.75□□□□□ -1.65
CBF5YLR175W RPT2P40327 437 aaKnown RBP4.75□□□□□ -1.65
CBF5YLR175W ARG2P40360 574 aa4.75□□□□□ -1.65
CBF5YLR175W TMA108P40462 946 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 547.3 ms