RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C GEM1P39722 662 aa3.59□□□□□ -1.83
SPT4YGR063C MTW1P39731 289 aa3.59□□□□□ -1.83
SPT4YGR063C SAH1P39954 449 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C DPH1P40487 425 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C SBE2P42223 864 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C SNZ3P43545 298 aa3.59□□□□□ -1.83
SPT4YGR063C FMP32P43557 207 aa3.59□□□□□ -1.83
SPT4YGR063C IES1P43579 692 aa3.59□□□□□ -1.83
SPT4YGR063C ATG36P46983 293 aa3.59□□□□□ -1.83
SPT4YGR063C GLG2P47011 380 aa3.59□□□□□ -1.83
SPT4YGR063C SRB7P47822 140 aa3.59□□□□□ -1.83
SPT4YGR063C DRN1P53255 507 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C COG2P53271 262 aa3.59□□□□□ -1.83
SPT4YGR063C CPR6P53691 371 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C BSC5P53755 489 aa3.59□□□□□ -1.83
SPT4YGR063C SNZ2P53824 298 aa3.59□□□□□ -1.83
SPT4YGR063C SED5Q01590 340 aa3.59□□□□□ -1.83
SPT4YGR063C PKH3Q03306 898 aaPredicted RBP3.59□□□□□ -1.83
SPT4YGR063C HER2Q03557 464 aa3.59□□□□□ -1.83
SPT4YGR063C ACL4Q03771 387 aa3.59□□□□□ -1.83
SPT4YGR063C BUD22Q04347 519 aaKnown RBP3.59□□□□□ -1.83
SPT4YGR063C PNP1Q05788 311 aa3.59□□□□□ -1.83
SPT4YGR063C YDL129WQ07555 291 aa3.59□□□□□ -1.83
SPT4YGR063C ADY3Q07732 790 aa3.59□□□□□ -1.83
SPT4YGR063C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SPT4YGR063C HER1Q12276 1246 aa3.59□□□□□ -1.83
SPT4YGR063C ATG11Q12527 1178 aa3.59□□□□□ -1.83
SPT4YGR063C YBL111CQ3E7Y5 667 aa3.59□□□□□ -1.83
SPT4YGR063C VCX1Q99385 411 aa3.59□□□□□ -1.83
SPT4YGR063C MRP2P10663 115 aaPredicted RBP3.58□□□□□ -1.84
SPT4YGR063C GLN4P13188 809 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C PMA2P19657 947 aa3.58□□□□□ -1.84
SPT4YGR063C ISY1P21374 235 aaPredicted RBP3.58□□□□□ -1.84
SPT4YGR063C PRP22P24384 1145 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C CAD1P24813 409 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C HIR1P32479 840 aa3.58□□□□□ -1.84
SPT4YGR063C YBL010CP32788 280 aa3.58□□□□□ -1.84
SPT4YGR063C DOM34P33309 386 aa3.58□□□□□ -1.84
SPT4YGR063C TRM2P33753 639 aa3.58□□□□□ -1.84
SPT4YGR063C NIC96P34077 839 aa3.58□□□□□ -1.84
SPT4YGR063C UBP11P36026 717 aa3.58□□□□□ -1.84
SPT4YGR063C STB6P36085 766 aa3.58□□□□□ -1.84
SPT4YGR063C ANR2P36090 516 aaPredicted RBP3.58□□□□□ -1.84
SPT4YGR063C UTP30P36144 274 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C ECM31P38122 312 aa3.58□□□□□ -1.84
SPT4YGR063C KTR4P38131 464 aa3.58□□□□□ -1.84
SPT4YGR063C KAP104P38217 918 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C SLM4P38247 162 aa3.58□□□□□ -1.84
SPT4YGR063C TIF5P38431 405 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C UTP9P38882 575 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C SET5P38890 526 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C STN1P38960 494 aa3.58□□□□□ -1.84
SPT4YGR063C VMA7P39111 118 aa3.58□□□□□ -1.84
SPT4YGR063C RCY1P39531 840 aa3.58□□□□□ -1.84
SPT4YGR063C MEF2P39677 819 aa3.58□□□□□ -1.84
SPT4YGR063C ZRG8P40021 1076 aa3.58□□□□□ -1.84
SPT4YGR063C SLX8P40072 274 aa3.58□□□□□ -1.84
SPT4YGR063C DDI1P40087 428 aa3.58□□□□□ -1.84
SPT4YGR063C PCI8P40512 444 aa3.58□□□□□ -1.84
SPT4YGR063C ROK1P45818 564 aaPredicted RBP3.58□□□□□ -1.84
SPT4YGR063C GUS1P46655 708 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SPT4YGR063C LSM8P47093 109 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C VPS70P47161 811 aa3.58□□□□□ -1.84
SPT4YGR063C STB4P50104 949 aa3.58□□□□□ -1.84
SPT4YGR063C OCA1P50946 238 aaPredicted RBP3.58□□□□□ -1.84
SPT4YGR063C YPT32P51996 222 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C ARO8P53090 500 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C MET13P53128 600 aa3.58□□□□□ -1.84
SPT4YGR063C USE1P53146 245 aa3.58□□□□□ -1.84
SPT4YGR063C YGR016WP53209 190 aa3.58□□□□□ -1.84
SPT4YGR063C PEF1P53238 335 aa3.58□□□□□ -1.84
SPT4YGR063C ZRG17P53735 605 aa3.58□□□□□ -1.84
SPT4YGR063C YNL058CP53947 316 aa3.58□□□□□ -1.84
SPT4YGR063C MDM1Q01846 1127 aa3.58□□□□□ -1.84
SPT4YGR063C EGD1Q02642 157 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C SRP1Q02821 542 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C NOG1Q02892 647 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C YMR187CQ03236 431 aa3.58□□□□□ -1.84
SPT4YGR063C COQ9Q05779 260 aa3.58□□□□□ -1.84
SPT4YGR063C YLR326WQ06170 240 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C SMD2Q06217 110 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C TOS4Q06266 489 aa3.58□□□□□ -1.84
SPT4YGR063C EAF1Q06337 982 aa3.58□□□□□ -1.84
SPT4YGR063C MLH2Q07980 695 aa3.58□□□□□ -1.84
SPT4YGR063C SGT1Q08446 395 aa3.58□□□□□ -1.84
SPT4YGR063C YOR214CQ12282 236 aa3.58□□□□□ -1.84
SPT4YGR063C ATG34Q12292 412 aa3.58□□□□□ -1.84
SPT4YGR063C RRI2Q12348 645 aa3.58□□□□□ -1.84
SPT4YGR063C RTR2Q12378 196 aa3.58□□□□□ -1.84
SPT4YGR063C PGA3Q12746 312 aaKnown RBP3.58□□□□□ -1.84
SPT4YGR063C GPM1P00950 247 aaKnown RBP3.57□□□□□ -1.84
SPT4YGR063C CDC24P11433 854 aaPredicted RBP3.57□□□□□ -1.84
SPT4YGR063C KSS1P14681 368 aa3.57□□□□□ -1.84
SPT4YGR063C STI1P15705 589 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SPT4YGR063C RDS2P19541 446 aaKnown RBP3.57□□□□□ -1.84
SPT4YGR063C URE2P23202 354 aaKnown RBP3.57□□□□□ -1.84
SPT4YGR063C VMA6P32366 345 aaKnown RBP3.57□□□□□ -1.84
SPT4YGR063C RPT1P33299 467 aaKnown RBP3.57□□□□□ -1.84
SPT4YGR063C PMT1P33775 817 aa3.57□□□□□ -1.84
SPT4YGR063C TAF14P35189 244 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms