RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	MRPS35	P53292	345 aa		3.99	□□□□□ -1.77
PMI40	YER003C	ERG5	P54781	538 aa		3.99	□□□□□ -1.77
PMI40	YER003C	GIR2	Q03768	265 aa	Predicted RBP	3.99	□□□□□ -1.77
PMI40	YER003C	TFC6	Q06339	672 aa		3.99	□□□□□ -1.77
PMI40	YER003C	THI22	Q06490	572 aa		3.99	□□□□□ -1.77
PMI40	YER003C	YCG1	Q06680	1035 aa		3.99	□□□□□ -1.77
PMI40	YER003C	AIM41	Q12032	185 aa		3.99	□□□□□ -1.77
PMI40	YER003C	PMA1	P05030	918 aa	Known RBP	3.98	□□□□□ -1.77
PMI40	YER003C	SNF1	P06782	633 aa	Known RBP	3.98	□□□□□ -1.77
PMI40	YER003C	BIK1	P11709	440 aa		3.98	□□□□□ -1.77
PMI40	YER003C	LAT1	P12695	482 aa	Known RBP	3.98	□□□□□ -1.77
PMI40	YER003C	PRP45	P28004	379 aa	Predicted RBP	3.98	□□□□□ -1.77
PMI40	YER003C	YBR138C	P38277	524 aa		3.98	□□□□□ -1.77
PMI40	YER003C	CRG1	P38892	291 aa	RIP-Chip data	3.98	□□□□□ -1.77	not detected
PMI40	YER003C	LYS9	P38999	446 aa		3.98	□□□□□ -1.77
PMI40	YER003C	FTR1	P40088	404 aa		3.98	□□□□□ -1.77
PMI40	YER003C	YIR042C	P40586	236 aa		3.98	□□□□□ -1.77
PMI40	YER003C	FKH2	P41813	862 aa		3.98	□□□□□ -1.77
PMI40	YER003C	SRB7	P47822	140 aa		3.98	□□□□□ -1.77
PMI40	YER003C	AMA1	P50082	593 aa		3.98	□□□□□ -1.77
PMI40	YER003C	MTL1	P53214	551 aa		3.98	□□□□□ -1.77
PMI40	YER003C	ACS1	Q01574	713 aa		3.98	□□□□□ -1.77
PMI40	YER003C	FDC1	Q03034	503 aa		3.98	□□□□□ -1.77
PMI40	YER003C	ARA2	Q04212	335 aa		3.98	□□□□□ -1.77
PMI40	YER003C	VID22	Q05934	901 aa		3.98	□□□□□ -1.77
PMI40	YER003C	CDC31	P06704	161 aa	Known RBP	3.97	□□□□□ -1.77
PMI40	YER003C	PCK1	P10963	549 aa		3.97	□□□□□ -1.77
PMI40	YER003C	HCM1	P25364	564 aa		3.97	□□□□□ -1.77
PMI40	YER003C	FSH1	P38777	243 aa	Known RBP	3.97	□□□□□ -1.77
PMI40	YER003C	SFB3	P38810	929 aa		3.97	□□□□□ -1.77
PMI40	YER003C	UME6	P39001	836 aa		3.97	□□□□□ -1.77
PMI40	YER003C	NOP16	P40007	231 aa	Known RBP	3.97	□□□□□ -1.77
PMI40	YER003C	HOS4	P40480	1083 aa		3.97	□□□□□ -1.77
PMI40	YER003C	SAP4	P53036	818 aa		3.97	□□□□□ -1.77
PMI40	YER003C	ADY4	Q05955	493 aa		3.97	□□□□□ -1.77
PMI40	YER003C	YFT2	Q06676	274 aa		3.97	□□□□□ -1.77
PMI40	YER003C	CSR1	Q06705	408 aa	Known RBP	3.97	□□□□□ -1.77
PMI40	YER003C	ADE3	P07245	946 aa	Known RBP	3.96	□□□□□ -1.78
PMI40	YER003C	TRP4	P07285	380 aa	Predicted RBP	3.96	□□□□□ -1.78
PMI40	YER003C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
PMI40	YER003C	RIT1	P23796	513 aa		3.96	□□□□□ -1.78
PMI40	YER003C	SWI4	P25302	1093 aa	Known RBP	3.96	□□□□□ -1.78
PMI40	YER003C	IFA38	P38286	347 aa		3.96	□□□□□ -1.78
PMI40	YER003C	COS111	P38308	924 aa		3.96	□□□□□ -1.78
PMI40	YER003C	AXL2	P38928	823 aa		3.96	□□□□□ -1.78
PMI40	YER003C	NUP60	P39705	539 aa		3.96	□□□□□ -1.78
PMI40	YER003C	YER010C	P40011	234 aa		3.96	□□□□□ -1.78
PMI40	YER003C	VFA1	P40080	203 aa		3.96	□□□□□ -1.78
PMI40	YER003C	NDE1	P40215	560 aa		3.96	□□□□□ -1.78
PMI40	YER003C	ESL1	P40456	1118 aa		3.96	□□□□□ -1.78
PMI40	YER003C	CAB2	P40506	365 aa		3.96	□□□□□ -1.78
PMI40	YER003C	AIM21	P40563	679 aa		3.96	□□□□□ -1.78
PMI40	YER003C	BST1	P43571	1029 aa		3.96	□□□□□ -1.78
PMI40	YER003C	POL31	P46957	487 aa		3.96	□□□□□ -1.78
PMI40	YER003C	ATG21	Q02887	496 aa		3.96	□□□□□ -1.78
PMI40	YER003C	VPS64	Q03944	604 aa		3.96	□□□□□ -1.78
PMI40	YER003C	IMH1	Q06704	911 aa	Known RBP	3.96	□□□□□ -1.78
PMI40	YER003C	TRM8	Q12009	286 aa		3.96	□□□□□ -1.78
PMI40	YER003C	SEC12	P11655	471 aa		3.95	□□□□□ -1.78
PMI40	YER003C	BET2	P20133	325 aa		3.95	□□□□□ -1.78
PMI40	YER003C	PRP28	P23394	588 aa		3.95	□□□□□ -1.78
PMI40	YER003C	FEN2	P25621	512 aa	Known RBP	3.95	□□□□□ -1.78
PMI40	YER003C	RAD16	P31244	790 aa		3.95	□□□□□ -1.78
PMI40	YER003C	CBF2	P32504	956 aa		3.95	□□□□□ -1.78
PMI40	YER003C	BCS1	P32839	456 aa		3.95	□□□□□ -1.78
PMI40	YER003C	VPS8	P39702	1274 aa		3.95	□□□□□ -1.78
PMI40	YER003C	PIG2	P40187	538 aa		3.95	□□□□□ -1.78
PMI40	YER003C	YIL077C	P40508	320 aa		3.95	□□□□□ -1.78
PMI40	YER003C	TEL2	P53038	688 aa		3.95	□□□□□ -1.78
PMI40	YER003C	RRT6	P53117	311 aa	Predicted RBP	3.95	□□□□□ -1.78
PMI40	YER003C	CBK1	P53894	756 aa		3.95	□□□□□ -1.78
PMI40	YER003C	AIM39	Q08223	395 aa		3.95	□□□□□ -1.78
PMI40	YER003C	SDH5	Q08230	162 aa		3.95	□□□□□ -1.78
PMI40	YER003C	NTO1	Q12311	748 aa		3.95	□□□□□ -1.78
PMI40	YER003C	ENT1	Q12518	454 aa		3.95	□□□□□ -1.78
PMI40	YER003C	FUM1	P08417	488 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	MET3	P08536	511 aa		3.94	□□□□□ -1.78
PMI40	YER003C	CAF20	P12962	161 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	GUK1	P15454	187 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	TUP1	P16649	713 aa		3.94	□□□□□ -1.78
PMI40	YER003C	VPS33	P20795	691 aa		3.94	□□□□□ -1.78
PMI40	YER003C	SAN1	P22470	610 aa		3.94	□□□□□ -1.78
PMI40	YER003C	PMI40	P29952	429 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	ARP2	P32381	391 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	PAH1	P32567	862 aa		3.94	□□□□□ -1.78
PMI40	YER003C	TRM2	P33753	639 aa		3.94	□□□□□ -1.78
PMI40	YER003C	TEF4	P36008	412 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	MUD2	P36084	527 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	FMO1	P38866	432 aa		3.94	□□□□□ -1.78
PMI40	YER003C	YJL193W	P39542	402 aa		3.94	□□□□□ -1.78
PMI40	YER003C	LRO1	P40345	661 aa		3.94	□□□□□ -1.78
PMI40	YER003C	DPH1	P40487	425 aa	Known RBP	3.94	□□□□□ -1.78
PMI40	YER003C	MUP1	P50276	574 aa		3.94	□□□□□ -1.78
PMI40	YER003C	TRS31	Q03337	283 aa		3.94	□□□□□ -1.78
PMI40	YER003C	GIS1	Q03833	894 aa		3.94	□□□□□ -1.78
PMI40	YER003C	DLT1	Q04216	342 aa		3.94	□□□□□ -1.78
PMI40	YER003C	LAS17	Q12446	633 aa		3.94	□□□□□ -1.78
PMI40	YER003C	SEM1	O94742	89 aa		3.93	□□□□□ -1.78
PMI40	YER003C	CTT1	P06115	562 aa		3.93	□□□□□ -1.78
PMI40	YER003C	MRP7	P12687	371 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms