RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W NDT80P38830 627 aa2.42□□□□□ -2.02
UBP1YDL122W TIF34P40217 347 aaKnown RBP2.42□□□□□ -2.02
UBP1YDL122W RPL4BP49626 362 aaKnown RBP2.42□□□□□ -2.02
UBP1YDL122W ERP6P53198 216 aa2.42□□□□□ -2.02
UBP1YDL122W ALG11P53954 548 aaKnown RBP2.42□□□□□ -2.02
UBP1YDL122W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
UBP1YDL122W EEB1Q02891 456 aa2.42□□□□□ -2.02
UBP1YDL122W TRM82Q03774 444 aa2.42□□□□□ -2.02
UBP1YDL122W GIS1Q03833 894 aa2.42□□□□□ -2.02
UBP1YDL122W RSC2Q06488 889 aa2.42□□□□□ -2.02
UBP1YDL122W NDJ1Q12366 352 aa2.42□□□□□ -2.02
UBP1YDL122W DED1P06634 604 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W RAD3P06839 778 aa2.41□□□□□ -2.02
UBP1YDL122W MSF1P08425 469 aa2.41□□□□□ -2.02
UBP1YDL122W KAR1P11927 433 aa2.41□□□□□ -2.02
UBP1YDL122W RIT1P23796 513 aa2.41□□□□□ -2.02
UBP1YDL122W AGP1P25376 633 aa2.41□□□□□ -2.02
UBP1YDL122W ARE1P25628 610 aa2.41□□□□□ -2.02
UBP1YDL122W MKK1P32490 508 aa2.41□□□□□ -2.02
UBP1YDL122W RML2P32611 393 aa2.41□□□□□ -2.02
UBP1YDL122W STE5P32917 917 aa2.41□□□□□ -2.02
UBP1YDL122W PGM1P33401 570 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W SQT1P35184 431 aa2.41□□□□□ -2.02
UBP1YDL122W YKL151CP36059 337 aa2.41□□□□□ -2.02
UBP1YDL122W YIL161WP40449 235 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W IRR1P40541 1150 aa2.41□□□□□ -2.02
UBP1YDL122W ALG2P43636 503 aa2.41□□□□□ -2.02
UBP1YDL122W HLJ1P48353 224 aa2.41□□□□□ -2.02
UBP1YDL122W PEX14P53112 341 aa2.41□□□□□ -2.02
UBP1YDL122W IGO1P53897 168 aa2.41□□□□□ -2.02
UBP1YDL122W SHE9Q04172 456 aa2.41□□□□□ -2.02
UBP1YDL122W SPO20Q04359 397 aa2.41□□□□□ -2.02
UBP1YDL122W COQ9Q05779 260 aa2.41□□□□□ -2.02
UBP1YDL122W ECM7Q06200 448 aa2.41□□□□□ -2.02
UBP1YDL122W NTG2Q08214 380 aa2.41□□□□□ -2.02
UBP1YDL122W YRA1Q12159 226 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W FRE7Q12333 620 aa2.41□□□□□ -2.02
UBP1YDL122W SKM1Q12469 655 aa2.41□□□□□ -2.02
UBP1YDL122W ADE4P04046 510 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W SAC7P17121 654 aa2.41□□□□□ -2.02
UBP1YDL122W SPO11P23179 398 aa2.41□□□□□ -2.02
UBP1YDL122W VPS3P23643 1011 aa2.41□□□□□ -2.02
UBP1YDL122W SRO9P25567 434 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W PRO3P32263 286 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W ATG19P35193 415 aa2.41□□□□□ -2.02
UBP1YDL122W MYO3P36006 1272 aa2.41□□□□□ -2.02
UBP1YDL122W AIM46P38885 310 aa2.41□□□□□ -2.02
UBP1YDL122W NUP60P39705 539 aa2.41□□□□□ -2.02
UBP1YDL122W RVS167P39743 482 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W VTC2P43585 828 aa2.41□□□□□ -2.02
UBP1YDL122W ARI1P53111 347 aaKnown RBP2.41□□□□□ -2.02
UBP1YDL122W NOP13P53883 403 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
UBP1YDL122W CEF1Q03654 590 aaPredicted RBP2.41□□□□□ -2.02
UBP1YDL122W IRA2P19158 3079 aa2.4□□□□□ -2.02
UBP1YDL122W RPS19AP07280 144 aaKnown RBP2.4□□□□□ -2.02
UBP1YDL122W RPS19BP07281 144 aaPredicted RBP2.4□□□□□ -2.02
UBP1YDL122W COQ1P18900 473 aa2.4□□□□□ -2.02
UBP1YDL122W SBA1P28707 216 aaKnown RBP2.4□□□□□ -2.02
UBP1YDL122W PYC2P32327 1180 aaKnown RBP2.4□□□□□ -2.02
UBP1YDL122W STE13P33894 931 aa2.4□□□□□ -2.02
UBP1YDL122W HEM14P40012 539 aa2.4□□□□□ -2.02
UBP1YDL122W ERG10P41338 398 aaKnown RBP2.4□□□□□ -2.02
UBP1YDL122W YGL260WP53056 76 aa2.4□□□□□ -2.02
UBP1YDL122W MSH6Q03834 1242 aa2.4□□□□□ -2.02
UBP1YDL122W YMR018WQ04364 514 aa2.4□□□□□ -2.02
UBP1YDL122W YFT2Q06676 274 aa2.4□□□□□ -2.02
UBP1YDL122W THI73Q07904 523 aa2.4□□□□□ -2.02
UBP1YDL122W ARP6Q12509 438 aa2.4□□□□□ -2.02
UBP1YDL122W MRP10O75012 95 aa2.4□□□□□ -2.03
UBP1YDL122W LYP1P32487 611 aa2.4□□□□□ -2.03
UBP1YDL122W ABD1P32783 436 aaPredicted RBP2.4□□□□□ -2.03
UBP1YDL122W PET10P36139 283 aa2.4□□□□□ -2.03
UBP1YDL122W VBA5P36172 582 aa2.4□□□□□ -2.03
UBP1YDL122W PBY1P38254 753 aa2.4□□□□□ -2.03
UBP1YDL122W RRM3P38766 723 aa2.4□□□□□ -2.03
UBP1YDL122W GEM1P39722 662 aa2.4□□□□□ -2.03
UBP1YDL122W PEX8P53248 589 aa2.4□□□□□ -2.03
UBP1YDL122W CTR9P89105 1077 aa2.4□□□□□ -2.03
UBP1YDL122W ROD1Q02805 837 aa2.4□□□□□ -2.03
UBP1YDL122W TFB2Q02939 513 aa2.4□□□□□ -2.03
UBP1YDL122W UGO1Q03327 502 aa2.4□□□□□ -2.03
UBP1YDL122W HER2Q03557 464 aa2.4□□□□□ -2.03
UBP1YDL122W VMS1Q04311 632 aaKnown RBP2.4□□□□□ -2.03
UBP1YDL122W YML096WQ04489 525 aa2.4□□□□□ -2.03
UBP1YDL122W PMT7Q06644 662 aa2.4□□□□□ -2.03
UBP1YDL122W YDL121CQ07541 149 aa2.4□□□□□ -2.03
UBP1YDL122W SPO21Q12411 609 aa2.4□□□□□ -2.03
UBP1YDL122W TY4B-PA0A0B7P3V8 1104 aa2.39□□□□□ -2.03
UBP1YDL122W TAF13P11747 167 aa2.39□□□□□ -2.03
UBP1YDL122W HCA4P20448 770 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W ANP1P32629 500 aa2.39□□□□□ -2.03
UBP1YDL122W KDX1P36005 433 aa2.39□□□□□ -2.03
UBP1YDL122W UBP11P36026 717 aa2.39□□□□□ -2.03
UBP1YDL122W VPS24P36095 224 aaKnown RBP2.39□□□□□ -2.03
UBP1YDL122W SEA4P38164 1038 aa2.39□□□□□ -2.03
UBP1YDL122W SUL1P38359 859 aa2.39□□□□□ -2.03
UBP1YDL122W YHR078WP38799 552 aa2.39□□□□□ -2.03
UBP1YDL122W YIL165CP40446 119 aa2.39□□□□□ -2.03
UBP1YDL122W PFD1P46988 109 aa2.39□□□□□ -2.03
UBP1YDL122W PMT3P47190 753 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 119.5 ms