RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W YBR225WP38321 900 aa3.9□□□□□ -1.78
ABP140YOR239W YHR112CP38716 378 aa3.9□□□□□ -1.78
ABP140YOR239W SSF1P38789 453 aaPredicted RBP3.9□□□□□ -1.78
ABP140YOR239W SMC2P38989 1170 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W PES4P39684 611 aa3.9□□□□□ -1.78
ABP140YOR239W SMX2P40204 77 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W FAF1P40546 346 aaPredicted RBP3.9□□□□□ -1.78
ABP140YOR239W BRE2P43132 505 aa3.9□□□□□ -1.78
ABP140YOR239W COG2P53271 262 aa3.9□□□□□ -1.78
ABP140YOR239W BSC5P53755 489 aa3.9□□□□□ -1.78
ABP140YOR239W CNM67P53865 581 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W ORC4P54791 529 aa3.9□□□□□ -1.78
ABP140YOR239W SLT2Q00772 484 aa3.9□□□□□ -1.78
ABP140YOR239W YPL062WQ02781 134 aa3.9□□□□□ -1.78
ABP140YOR239W SRP1Q02821 542 aaKnown RBP3.9□□□□□ -1.78
ABP140YOR239W INA17Q02888 182 aa3.9□□□□□ -1.78
ABP140YOR239W FCP1Q03254 732 aa3.9□□□□□ -1.78
ABP140YOR239W MTC5Q03897 1148 aa3.9□□□□□ -1.78
ABP140YOR239W HIM1Q06674 414 aa3.9□□□□□ -1.78
ABP140YOR239W YPR084WQ06821 456 aa3.9□□□□□ -1.78
ABP140YOR239W YDL109CQ12103 647 aa3.9□□□□□ -1.78
ABP140YOR239W BAG7Q12128 409 aa3.9□□□□□ -1.78
ABP140YOR239W TCB1Q12466 1186 aa3.9□□□□□ -1.78
ABP140YOR239W LEU2P04173 364 aaPredicted RBP3.9□□□□□ -1.79
ABP140YOR239W MOD5P07884 428 aa3.9□□□□□ -1.79
ABP140YOR239W RPS6AP0CX37 236 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W RPS6BP0CX38 236 aaPredicted RBP3.9□□□□□ -1.79
ABP140YOR239W PMS1P14242 873 aa3.9□□□□□ -1.79
ABP140YOR239W HSP60P19882 572 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W ISY1P21374 235 aaPredicted RBP3.9□□□□□ -1.79
ABP140YOR239W SPO11P23179 398 aa3.9□□□□□ -1.79
ABP140YOR239W RPC53P25441 422 aa3.9□□□□□ -1.79
ABP140YOR239W GCD11P32481 527 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W GLG1P36143 616 aa3.9□□□□□ -1.79
ABP140YOR239W YKR078WP36158 585 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W SWC5P38326 303 aa3.9□□□□□ -1.79
ABP140YOR239W RRF1P38771 230 aa3.9□□□□□ -1.79
ABP140YOR239W GEM1P39722 662 aa3.9□□□□□ -1.79
ABP140YOR239W ZRG8P40021 1076 aa3.9□□□□□ -1.79
ABP140YOR239W SLX8P40072 274 aa3.9□□□□□ -1.79
ABP140YOR239W JLP2P40206 208 aa3.9□□□□□ -1.79
ABP140YOR239W MNT3P40549 630 aa3.9□□□□□ -1.79
ABP140YOR239W MDE1P47095 244 aa3.9□□□□□ -1.79
ABP140YOR239W TRF5P48561 642 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W GPI8P49018 411 aa3.9□□□□□ -1.79
ABP140YOR239W STB4P50104 949 aa3.9□□□□□ -1.79
ABP140YOR239W PSP2P50109 593 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W NUP84P52891 726 aa3.9□□□□□ -1.79
ABP140YOR239W ADE16P54113 591 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W PRO2P54885 456 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W HER2Q03557 464 aa3.9□□□□□ -1.79
ABP140YOR239W URH1Q04179 340 aa3.9□□□□□ -1.79
ABP140YOR239W VIP1Q06685 1146 aaKnown RBP3.9□□□□□ -1.79
ABP140YOR239W MNL2Q12205 849 aa3.9□□□□□ -1.79
ABP140YOR239W SNU23Q12368 194 aaPredicted RBP3.9□□□□□ -1.79
ABP140YOR239W YDL206WQ12424 762 aa3.9□□□□□ -1.79
ABP140YOR239W CDC19P00549 500 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W MATALPHA2P0CY08 210 aa3.89□□□□□ -1.79
ABP140YOR239W HMLALPHA2P0CY09 210 aa3.89□□□□□ -1.79
ABP140YOR239W MSD1P15179 658 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W SPO12P17123 173 aa3.89□□□□□ -1.79
ABP140YOR239W PMA2P19657 947 aa3.89□□□□□ -1.79
ABP140YOR239W DBP3P20447 523 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W DBF2P22204 572 aa3.89□□□□□ -1.79
ABP140YOR239W APN1P22936 367 aa3.89□□□□□ -1.79
ABP140YOR239W SWI4P25302 1093 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W ITR1P30605 584 aa3.89□□□□□ -1.79
ABP140YOR239W NAM7P30771 971 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W HXT1P32465 570 aa3.89□□□□□ -1.79
ABP140YOR239W RTG2P32608 588 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W RPT1P33299 467 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W PFF1P38244 976 aa3.89□□□□□ -1.79
ABP140YOR239W RCK2P38623 610 aa3.89□□□□□ -1.79
ABP140YOR239W YHI9P38765 294 aa3.89□□□□□ -1.79
ABP140YOR239W CTM1P38818 585 aa3.89□□□□□ -1.79
ABP140YOR239W MTG2P38860 518 aa3.89□□□□□ -1.79
ABP140YOR239W OAF1P39720 1047 aaPredicted RBP3.89□□□□□ -1.79
ABP140YOR239W IES1P43579 692 aa3.89□□□□□ -1.79
ABP140YOR239W PSP1P50896 841 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W ZIP2P53061 704 aa3.89□□□□□ -1.79
ABP140YOR239W DSD1P53095 428 aa3.89□□□□□ -1.79
ABP140YOR239W PEF1P53238 335 aa3.89□□□□□ -1.79
ABP140YOR239W YNR063WP53749 607 aa3.89□□□□□ -1.79
ABP140YOR239W NOG1Q02892 647 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W FDC1Q03034 503 aa3.89□□□□□ -1.79
ABP140YOR239W GCN5Q03330 439 aa3.89□□□□□ -1.79
ABP140YOR239W YDR239CQ03780 787 aa3.89□□□□□ -1.79
ABP140YOR239W YLR407WQ06070 228 aa3.89□□□□□ -1.79
ABP140YOR239W DTD1Q07648 150 aaKnown RBP3.89□□□□□ -1.79
ABP140YOR239W YLR001CQ07895 862 aa3.89□□□□□ -1.79
ABP140YOR239W VHS3Q08438 674 aa3.89□□□□□ -1.79
ABP140YOR239W SGT1Q08446 395 aa3.89□□□□□ -1.79
ABP140YOR239W AFT2Q08957 416 aa3.89□□□□□ -1.79
ABP140YOR239W VPS54Q12071 889 aa3.89□□□□□ -1.79
ABP140YOR239W YOR111WQ99210 232 aa3.89□□□□□ -1.79
ABP140YOR239W DSF1P0CX08 502 aa3.88□□□□□ -1.79
ABP140YOR239W YNR073CP0CX09 502 aa3.88□□□□□ -1.79
ABP140YOR239W GFA1P14742 717 aaKnown RBP3.88□□□□□ -1.79
ABP140YOR239W RPS5P26783 225 aaKnown RBP3.88□□□□□ -1.79
ABP140YOR239W PRP19P32523 503 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms