RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W SPC19Q03954 165 aa2.13□□□□□ -2.07
HER1YOR227W ECM30Q06673 1274 aa2.13□□□□□ -2.07
HER1YOR227W MET7Q08645 548 aa2.13□□□□□ -2.07
HER1YOR227W RPL11BQ3E757 174 aaPredicted RBP2.13□□□□□ -2.07
HER1YOR227W YDR034W-BQ6Q5X2 51 aa2.13□□□□□ -2.07
HER1YOR227W DYN1P36022 4092 aa2.12□□□□□ -2.07
HER1YOR227W MET17P06106 444 aa2.12□□□□□ -2.07
HER1YOR227W UBC1P21734 215 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W CDC48P25694 835 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W CYS3P31373 394 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W ADD66P36040 267 aa2.12□□□□□ -2.07
HER1YOR227W ALG3P38179 458 aa2.12□□□□□ -2.07
HER1YOR227W YIL166CP40445 542 aa2.12□□□□□ -2.07
HER1YOR227W YIL092WP40497 633 aa2.12□□□□□ -2.07
HER1YOR227W YJR039WP47107 1121 aa2.12□□□□□ -2.07
HER1YOR227W YGR153WP48238 217 aa2.12□□□□□ -2.07
HER1YOR227W ASK10P48361 1146 aa2.12□□□□□ -2.07
HER1YOR227W ATP22P50273 684 aaPredicted RBP2.12□□□□□ -2.07
HER1YOR227W BIO5P53744 561 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W YNL035CP53962 389 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W LEE1Q02799 301 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W FDC1Q03034 503 aa2.12□□□□□ -2.07
HER1YOR227W YMR155WQ03795 547 aa2.12□□□□□ -2.07
HER1YOR227W ESC8Q08119 714 aa2.12□□□□□ -2.07
HER1YOR227W YBR182C-AQ8TGU6 64 aa2.12□□□□□ -2.07
HER1YOR227W TUF1P02992 437 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W FUS1P11710 512 aa2.12□□□□□ -2.07
HER1YOR227W YCL002CP25565 263 aa2.12□□□□□ -2.07
HER1YOR227W SEC21P32074 935 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W PRS1P32895 427 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W PXA2P34230 853 aa2.12□□□□□ -2.07
HER1YOR227W BYE1P36106 594 aa2.12□□□□□ -2.07
HER1YOR227W CTF18P49956 741 aa2.12□□□□□ -2.07
HER1YOR227W YNR063WP53749 607 aa2.12□□□□□ -2.07
HER1YOR227W TIM50Q02776 476 aa2.12□□□□□ -2.07
HER1YOR227W YPR027CQ12079 277 aa2.12□□□□□ -2.07
HER1YOR227W GNT1Q12096 491 aa2.12□□□□□ -2.07
HER1YOR227W PCD1Q12524 340 aa2.12□□□□□ -2.07
HER1YOR227W LAM4P38800 1345 aa2.12□□□□□ -2.07
HER1YOR227W PET123P17558 318 aa2.12□□□□□ -2.07
HER1YOR227W ACE2P21192 770 aa2.12□□□□□ -2.07
HER1YOR227W FRD1P32614 470 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W SLA2P33338 968 aa2.12□□□□□ -2.07
HER1YOR227W PGM2P37012 569 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W STV1P37296 890 aa2.12□□□□□ -2.07
HER1YOR227W KEL1P38853 1164 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W STT3P39007 718 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W EMP65P40085 556 aa2.12□□□□□ -2.07
HER1YOR227W YJR124CP47159 448 aa2.12□□□□□ -2.07
HER1YOR227W RAD17P48581 401 aa2.12□□□□□ -2.07
HER1YOR227W OCA1P50946 238 aaPredicted RBP2.12□□□□□ -2.07
HER1YOR227W HOS3Q02959 697 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W MFB1Q04922 465 aa2.12□□□□□ -2.07
HER1YOR227W ADY3Q07732 790 aa2.12□□□□□ -2.07
HER1YOR227W SPE3Q12074 293 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W TAH18Q12181 623 aa2.12□□□□□ -2.07
HER1YOR227W PUS1Q12211 544 aaKnown RBP2.12□□□□□ -2.07
HER1YOR227W Q0142Q9ZZW4 58 aa2.12□□□□□ -2.07
HER1YOR227W CKA1P15790 372 aa2.11□□□□□ -2.07
HER1YOR227W THR1P17423 357 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W ACO1P19414 778 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
HER1YOR227W MF(ALPHA)2P32435 120 aa2.11□□□□□ -2.07
HER1YOR227W PPQ1P32945 549 aa2.11□□□□□ -2.07
HER1YOR227W YKL100CP34248 587 aa2.11□□□□□ -2.07
HER1YOR227W CTF13P35203 478 aa2.11□□□□□ -2.07
HER1YOR227W YKR051WP36142 418 aa2.11□□□□□ -2.07
HER1YOR227W YLF2P38746 405 aa2.11□□□□□ -2.07
HER1YOR227W SWD1P39706 426 aa2.11□□□□□ -2.07
HER1YOR227W INP51P40559 946 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W SEC27P41811 889 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W NCS6P53088 359 aa2.11□□□□□ -2.07
HER1YOR227W LRS4Q04087 347 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W NHX1Q04121 633 aa2.11□□□□□ -2.07
HER1YOR227W RNH1Q04740 348 aa2.11□□□□□ -2.07
HER1YOR227W LAP2Q10740 671 aa2.11□□□□□ -2.07
HER1YOR227W SMC6Q12749 1114 aa2.11□□□□□ -2.07
HER1YOR227W GLN4P13188 809 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W SNT1P25357 1226 aa2.11□□□□□ -2.07
HER1YOR227W SGF29P25554 259 aa2.11□□□□□ -2.07
HER1YOR227W SRO9P25567 434 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W HXT4P32467 576 aa2.11□□□□□ -2.07
HER1YOR227W RTG1P32607 177 aa2.11□□□□□ -2.07
HER1YOR227W RAD24P32641 659 aa2.11□□□□□ -2.07
HER1YOR227W XRS2P33301 854 aa2.11□□□□□ -2.07
HER1YOR227W BCK2P33306 851 aa2.11□□□□□ -2.07
HER1YOR227W TIF11P38912 153 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W RGA1P39083 1007 aa2.11□□□□□ -2.07
HER1YOR227W JEM1P40358 645 aa2.11□□□□□ -2.07
HER1YOR227W VPS53P47061 822 aa2.11□□□□□ -2.07
HER1YOR227W NOP9P47077 666 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W ELA1P53861 379 aaPredicted RBP2.11□□□□□ -2.07
HER1YOR227W YML082WQ04533 649 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W DUS3Q06053 668 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W NUR1Q12066 484 aa2.11□□□□□ -2.07
HER1YOR227W SMF3Q12078 473 aaPredicted RBP2.11□□□□□ -2.07
HER1YOR227W PSF3Q12146 194 aa2.11□□□□□ -2.07
HER1YOR227W PHO81P17442 1178 aa2.11□□□□□ -2.07
HER1YOR227W MCM3P24279 971 aaKnown RBP2.11□□□□□ -2.07
HER1YOR227W REC104P33323 182 aa2.11□□□□□ -2.07
HER1YOR227W MCM7P38132 845 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms