RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	RMA1	P36001	430 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	STT3	P39007	718 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	MEF2	P39677	819 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	PUG1	P40100	303 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	DSN1	P40568	576 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	CPR6	P53691	371 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	RGC1	Q06108	1083 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	MCM21	Q06675	368 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	GPB1	Q08886	897 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	TGL5	Q12043	749 aa		4.83	□□□□□ -1.64
SMF1	YOL122C	HRP1	Q99383	534 aa	Known RBP	4.83	□□□□□ -1.64
SMF1	YOL122C	CHD1	P32657	1468 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	ROX1	P25042	368 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	AIM21	P40563	679 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	BIT61	P47041	543 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	AVT1	P47082	602 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	ENP2	P48234	707 aa	Known RBP	4.82	□□□□□ -1.64
SMF1	YOL122C	REC102	Q02721	264 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	PEX19	Q07418	342 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	VPS5	Q92331	675 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	SSM4	P40318	1319 aa		4.82	□□□□□ -1.64
SMF1	YOL122C	URA3	P03962	267 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	PRE4	P30657	266 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	NGG1	P32494	702 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	CDS1	P38221	457 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	YBR138C	P38277	524 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	YBR259W	P38338	688 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	RPP1	P38786	293 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	NOC2	P39744	710 aa	Known RBP	4.81	□□□□□ -1.64
SMF1	YOL122C	GET2	P40056	285 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	NOP9	P47077	666 aa	Known RBP	4.81	□□□□□ -1.64
SMF1	YOL122C	RRT6	P53117	311 aa	Predicted RBP	4.81	□□□□□ -1.64
SMF1	YOL122C	TEX1	P53851	422 aa	Known RBP	4.81	□□□□□ -1.64
SMF1	YOL122C	NSE5	Q03718	556 aa		4.81	□□□□□ -1.64
SMF1	YOL122C	MDS3	P53094	1487 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	ARG1	P22768	420 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	MCM3	P24279	971 aa	Known RBP	4.8	□□□□□ -1.64
SMF1	YOL122C	SWI4	P25302	1093 aa	Known RBP	4.8	□□□□□ -1.64
SMF1	YOL122C	YCL049C	P25577	312 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	CHS3	P29465	1165 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SMF1	YOL122C	BYE1	P36106	594 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	POL12	P38121	705 aa	Predicted RBP	4.8	□□□□□ -1.64
SMF1	YOL122C	PRM2	P40534	656 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	PXA1	P41909	870 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	PEF1	P53238	335 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	SNO2	P53823	222 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	TFC6	Q06339	672 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	PHO5	P00635	467 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	LYS9	P38999	446 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	ECM1	P39715	212 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	SSP120	P39931	234 aa	Known RBP	4.8	□□□□□ -1.64
SMF1	YOL122C	SMK1	P41808	388 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	YDL183C	P48569	320 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	ACS1	Q01574	713 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	MDM1	Q01846	1127 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	NRG1	Q03125	231 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	GCN5	Q03330	439 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	YDR132C	Q03900	495 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	VBA4	Q04602	768 aa	Known RBP	4.8	□□□□□ -1.64
SMF1	YOL122C	NOP12	Q08208	459 aa	Known RBP	4.8	□□□□□ -1.64
SMF1	YOL122C	ATG11	Q12527	1178 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	DFG16	Q99234	619 aa		4.8	□□□□□ -1.64
SMF1	YOL122C	SNF1	P06782	633 aa	Known RBP	4.79	□□□□□ -1.64
SMF1	YOL122C	ERG20	P08524	352 aa	Known RBP	4.79	□□□□□ -1.64
SMF1	YOL122C	MTF2	P10849	440 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	HMG2	P12684	1045 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	POL3	P15436	1097 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	CTF13	P35203	478 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	RRN3	P36070	627 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	IFA38	P38286	347 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	ECL1	P48235	211 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	MRPL22	P53881	309 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	XRN1	P22147	1528 aa	Known RBP	4.79	□□□□□ -1.64
SMF1	YOL122C	TOP2	P06786	1428 aa	Known RBP	4.79	□□□□□ -1.64
SMF1	YOL122C	SPP41	P38904	1435 aa		4.79	□□□□□ -1.64
SMF1	YOL122C	TY1B-A	O13527	1196 aa	Known RBP	4.78	□□□□□ -1.64
SMF1	YOL122C	GUK1	P15454	187 aa	Known RBP	4.78	□□□□□ -1.64
SMF1	YOL122C	KAR4	P25583	335 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	CDC20	P26309	610 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	SET3	P36124	751 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	CRG1	P38892	291 aa	RIP-Chip data	4.78	□□□□□ -1.64	not detected
SMF1	YOL122C	AXL2	P38928	823 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	PLB1	P39105	664 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	NDE1	P40215	560 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	HOS4	P40480	1083 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	MTL1	P53214	551 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	SQS1	P53866	767 aa	Known RBP	4.78	□□□□□ -1.64
SMF1	YOL122C	MRPL13	Q02204	264 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	OPY2	Q06810	360 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	RXT3	Q07458	294 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	YOR352W	Q08816	343 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	BMS1	Q08965	1183 aa	Known RBP	4.78	□□□□□ -1.64
SMF1	YOL122C	CLF1	Q12309	687 aa	Predicted RBP	4.78	□□□□□ -1.64
SMF1	YOL122C	TRM11	Q12463	433 aa		4.78	□□□□□ -1.64
SMF1	YOL122C	RPP2A	P05319	106 aa	Known RBP	4.77	□□□□□ -1.65
SMF1	YOL122C	NUC1	P08466	329 aa		4.77	□□□□□ -1.65
SMF1	YOL122C	HSC82	P15108	705 aa	Known RBP	4.77	□□□□□ -1.65
SMF1	YOL122C	TUP1	P16649	713 aa		4.77	□□□□□ -1.65
SMF1	YOL122C	SIR1	P21691	654 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms