RNA–Protein interactions for RNA: YMR129W

POM152, Transcript of Glycoprotein subunit of transmembrane ring of nuclear pore complex, yeast

Gene POM152, Length 4,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
POM152	YMR129W	PCK1	P10963	549 aa		3	□□□□□ -1.93
POM152	YMR129W	TUP1	P16649	713 aa		3	□□□□□ -1.93
POM152	YMR129W	CMK1	P27466	446 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	RPT3	P33298	428 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	TEF4	P36008	412 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	MUM2	P38236	366 aa		3	□□□□□ -1.93
POM152	YMR129W	RFC5	P38251	354 aa		3	□□□□□ -1.93
POM152	YMR129W	SRP68	P38687	599 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	SRP72	P38688	640 aa	Known RBP	3	□□□□□ -1.93
POM152	YMR129W	MAF1	P41910	395 aa		3	□□□□□ -1.93
POM152	YMR129W	COG1	P53079	417 aa		3	□□□□□ -1.93
POM152	YMR129W	ARP9	Q05123	467 aa		3	□□□□□ -1.93
POM152	YMR129W	PEP3	P27801	918 aa		3	□□□□□ -1.93
POM152	YMR129W	LRG1	P35688	1017 aa		3	□□□□□ -1.93
POM152	YMR129W	KTR3	P38130	404 aa	Predicted RBP	3	□□□□□ -1.93
POM152	YMR129W	RXT2	P38255	430 aa		3	□□□□□ -1.93
POM152	YMR129W	YNR014W	P53719	212 aa		3	□□□□□ -1.93
POM152	YMR129W	REG1	Q00816	1014 aa		3	□□□□□ -1.93
POM152	YMR129W	MUS81	Q04149	632 aa	Predicted RBP	3	□□□□□ -1.93
POM152	YMR129W	GYL1	Q04322	720 aa		3	□□□□□ -1.93
POM152	YMR129W	YOL159C-A	Q3E769	90 aa		3	□□□□□ -1.93
POM152	YMR129W	SPT7	P35177	1332 aa		3	□□□□□ -1.93
POM152	YMR129W	LEU2	P04173	364 aa	Predicted RBP	2.99	□□□□□ -1.93
POM152	YMR129W	MIS1	P09440	975 aa	Known RBP	2.99	□□□□□ -1.93
POM152	YMR129W	FRS1	P15624	595 aa	Known RBP	2.99	□□□□□ -1.93
POM152	YMR129W	IMP2'	P32351	346 aa		2.99	□□□□□ -1.93
POM152	YMR129W	RKM3	P38222	552 aa		2.99	□□□□□ -1.93
POM152	YMR129W	YHR078W	P38799	552 aa		2.99	□□□□□ -1.93
POM152	YMR129W	NOP16	P40007	231 aa	Known RBP	2.99	□□□□□ -1.93
POM152	YMR129W	FMP10	P40098	244 aa		2.99	□□□□□ -1.93
POM152	YMR129W	KHA1	P40309	873 aa		2.99	□□□□□ -1.93
POM152	YMR129W	LCB2	P40970	561 aa		2.99	□□□□□ -1.93
POM152	YMR129W	SGM1	P47166	707 aa		2.99	□□□□□ -1.93
POM152	YMR129W	ATP22	P50273	684 aa	Predicted RBP	2.99	□□□□□ -1.93
POM152	YMR129W	ROT1	Q03691	256 aa		2.99	□□□□□ -1.93
POM152	YMR129W	RAD30	Q04049	632 aa		2.99	□□□□□ -1.93
POM152	YMR129W	CDA1	Q06702	301 aa		2.99	□□□□□ -1.93
POM152	YMR129W	POL4	P25615	582 aa		2.99	□□□□□ -1.93
POM152	YMR129W	MF(ALPHA)2	P32435	120 aa		2.99	□□□□□ -1.93
POM152	YMR129W	MIP6	P38760	659 aa	Known RBP	2.99	□□□□□ -1.93
POM152	YMR129W	APE4	P38821	490 aa		2.99	□□□□□ -1.93
POM152	YMR129W	RIC1	P40395	1056 aa		2.99	□□□□□ -1.93
POM152	YMR129W	PRP31	P49704	494 aa	Predicted RBP	2.99	□□□□□ -1.93
POM152	YMR129W	PSP1	P50896	841 aa	Known RBP	2.99	□□□□□ -1.93
POM152	YMR129W	DSE4	P53753	1117 aa		2.99	□□□□□ -1.93
POM152	YMR129W	ORC4	P54791	529 aa		2.99	□□□□□ -1.93
POM152	YMR129W	SKG3	Q06315	1026 aa		2.99	□□□□□ -1.93
POM152	YMR129W	TFC6	Q06339	672 aa		2.99	□□□□□ -1.93
POM152	YMR129W	RPC53	P25441	422 aa		2.99	□□□□□ -1.93
POM152	YMR129W	GAR1	P28007	205 aa	Known RBP	2.99	□□□□□ -1.93
POM152	YMR129W	PZF1	P39933	429 aa		2.99	□□□□□ -1.93
POM152	YMR129W	RMD8	P43620	662 aa		2.99	□□□□□ -1.93
POM152	YMR129W	YJL055W	P47044	245 aa		2.99	□□□□□ -1.93
POM152	YMR129W	TAF4	P50105	388 aa		2.99	□□□□□ -1.93
POM152	YMR129W	BTN2	P53286	410 aa		2.99	□□□□□ -1.93
POM152	YMR129W	YCG1	Q06680	1035 aa		2.99	□□□□□ -1.93
POM152	YMR129W	YLL058W	Q12198	575 aa		2.99	□□□□□ -1.93
POM152	YMR129W	ADE2	P21264	571 aa	Known RBP	2.98	□□□□□ -1.93
POM152	YMR129W	YSA1	Q01976	231 aa		2.98	□□□□□ -1.93
POM152	YMR129W	IWR1	Q07532	353 aa	Predicted RBP	2.98	□□□□□ -1.93
POM152	YMR129W	YOR111W	Q99210	232 aa		2.98	□□□□□ -1.93
POM152	YMR129W	YLR302C	O13544	120 aa		2.98	□□□□□ -1.93
POM152	YMR129W	MNE1	P24720	663 aa		2.98	□□□□□ -1.93
POM152	YMR129W	GPI10	P30777	616 aa		2.98	□□□□□ -1.93
POM152	YMR129W	NGG1	P32494	702 aa		2.98	□□□□□ -1.93
POM152	YMR129W	RFC1	P38630	861 aa	Known RBP	2.98	□□□□□ -1.93
POM152	YMR129W	MEP1	P40260	492 aa		2.98	□□□□□ -1.93
POM152	YMR129W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
POM152	YMR129W	CTF18	P49956	741 aa		2.98	□□□□□ -1.93
POM152	YMR129W	AIM32	Q04689	311 aa		2.98	□□□□□ -1.93
POM152	YMR129W	HOF1	Q05080	669 aa		2.98	□□□□□ -1.93
POM152	YMR129W	HOS1	Q12214	470 aa		2.98	□□□□□ -1.93
POM152	YMR129W	PRE2	P30656	287 aa	Known RBP	2.98	□□□□□ -1.93
POM152	YMR129W	JHD1	P40034	492 aa		2.98	□□□□□ -1.93
POM152	YMR129W	MRPS35	P53292	345 aa		2.98	□□□□□ -1.93
POM152	YMR129W	GPR1	Q12361	961 aa		2.98	□□□□□ -1.93
POM152	YMR129W	SIR1	P21691	654 aa		2.97	□□□□□ -1.93
POM152	YMR129W	YCK2	P23292	546 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	SAS3	P34218	831 aa		2.97	□□□□□ -1.93
POM152	YMR129W	CDS1	P38221	457 aa		2.97	□□□□□ -1.93
POM152	YMR129W	MRX6	P48564	524 aa		2.97	□□□□□ -1.93
POM152	YMR129W	GSF2	Q04697	403 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	IMH1	Q06704	911 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	RVB2	Q12464	471 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	SKM1	Q12469	655 aa		2.97	□□□□□ -1.93
POM152	YMR129W	PNO1	Q99216	274 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	MTC7	P32633	139 aa		2.97	□□□□□ -1.93
POM152	YMR129W	CRG1	P38892	291 aa	RIP-Chip data	2.97	□□□□□ -1.93	not detected
POM152	YMR129W	YJR061W	P40355	935 aa		2.97	□□□□□ -1.93
POM152	YMR129W	CAB2	P40506	365 aa		2.97	□□□□□ -1.93
POM152	YMR129W	FAF1	P40546	346 aa	Predicted RBP	2.97	□□□□□ -1.93
POM152	YMR129W	MPP10	P47083	593 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	SRC1	Q03707	834 aa		2.97	□□□□□ -1.93
POM152	YMR129W	SSY1	Q03770	852 aa		2.97	□□□□□ -1.93
POM152	YMR129W	GET3	Q12154	354 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	CYC1	P00044	109 aa	Predicted RBP	2.97	□□□□□ -1.93
POM152	YMR129W	FUM1	P08417	488 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	YHR112C	P38716	378 aa		2.97	□□□□□ -1.93
POM152	YMR129W	ETP1	P38748	585 aa	Known RBP	2.97	□□□□□ -1.93
POM152	YMR129W	POP2	P39008	433 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms