RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C VID30P53076 958 aa3.65□□□□□ -1.83
SHH3YMR118C COS6P53344 381 aa3.65□□□□□ -1.83
SHH3YMR118C RPT4P53549 437 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C FOL1P53848 824 aa3.65□□□□□ -1.83
SHH3YMR118C ESBP6P53918 673 aa3.65□□□□□ -1.83
SHH3YMR118C AIM33Q04516 312 aa3.65□□□□□ -1.83
SHH3YMR118C YLR297WQ05899 129 aa3.65□□□□□ -1.83
SHH3YMR118C CDC53Q12018 815 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C FAL1Q12099 399 aaKnown RBP3.65□□□□□ -1.83
SHH3YMR118C RUP1Q12242 671 aa3.65□□□□□ -1.83
SHH3YMR118C YPT6Q99260 215 aa3.65□□□□□ -1.83
SHH3YMR118C RPL24AP04449 155 aaKnown RBP3.64□□□□□ -1.83
SHH3YMR118C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SHH3YMR118C SNF1P06782 633 aaKnown RBP3.64□□□□□ -1.83
SHH3YMR118C RPL8AP17076 256 aaKnown RBP3.64□□□□□ -1.83
SHH3YMR118C ACE2P21192 770 aa3.64□□□□□ -1.83
SHH3YMR118C MSN1P22148 382 aa3.64□□□□□ -1.83
SHH3YMR118C SEC20P28791 383 aa3.64□□□□□ -1.83
SHH3YMR118C MLS1P30952 554 aa3.64□□□□□ -1.83
SHH3YMR118C EFT1P32324 842 aaKnown RBP3.64□□□□□ -1.83
SHH3YMR118C DBF4P32325 704 aa3.64□□□□□ -1.83
SHH3YMR118C VPH2P32341 215 aa3.64□□□□□ -1.83
SHH3YMR118C NPL6P32832 435 aa3.64□□□□□ -1.83
SHH3YMR118C TRM2P33753 639 aa3.64□□□□□ -1.83
SHH3YMR118C SEC66P33754 206 aa3.64□□□□□ -1.83
SHH3YMR118C TRZ1P36159 838 aaPredicted RBP3.64□□□□□ -1.83
SHH3YMR118C AIM20P40451 204 aa3.64□□□□□ -1.83
SHH3YMR118C DOT5P40553 215 aa3.64□□□□□ -1.83
SHH3YMR118C MPH1P40562 993 aa3.64□□□□□ -1.83
SHH3YMR118C SET2P46995 733 aaKnown RBP3.64□□□□□ -1.83
SHH3YMR118C PGA2P53903 129 aa3.64□□□□□ -1.83
SHH3YMR118C SYF1Q04048 859 aaPredicted RBP3.64□□□□□ -1.83
SHH3YMR118C ORM2Q06144 216 aa3.64□□□□□ -1.83
SHH3YMR118C ATG17Q06410 417 aa3.64□□□□□ -1.83
SHH3YMR118C TDA5Q06417 326 aaKnown RBP3.64□□□□□ -1.83
SHH3YMR118C VHS3Q08438 674 aa3.64□□□□□ -1.83
SHH3YMR118C BUG1Q12191 341 aa3.64□□□□□ -1.83
SHH3YMR118C ILV1P00927 576 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C THS1P04801 734 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C ADE3P07245 946 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C GCR1P07261 785 aa3.63□□□□□ -1.83
SHH3YMR118C YML002WP0CF17 737 aa3.63□□□□□ -1.83
SHH3YMR118C HEM15P16622 393 aa3.63□□□□□ -1.83
SHH3YMR118C MSB1P21339 1137 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C PUP1P25043 261 aa3.63□□□□□ -1.83
SHH3YMR118C PUF4P25339 888 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SHH3YMR118C KRE2P27809 442 aa3.63□□□□□ -1.83
SHH3YMR118C RPC19P28000 142 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C CAP1P28495 268 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C KAR9P32526 644 aa3.63□□□□□ -1.83
SHH3YMR118C NUF2P33895 451 aa3.63□□□□□ -1.83
SHH3YMR118C COY1P34237 679 aa3.63□□□□□ -1.83
SHH3YMR118C MAE1P36013 669 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C PES4P39684 611 aa3.63□□□□□ -1.83
SHH3YMR118C SIT1P39980 628 aa3.63□□□□□ -1.83
SHH3YMR118C FIR1P40020 876 aa3.63□□□□□ -1.83
SHH3YMR118C PDS1P40316 373 aaPredicted RBP3.63□□□□□ -1.83
SHH3YMR118C SHE10P53075 577 aa3.63□□□□□ -1.83
SHH3YMR118C IST1P53843 298 aaPredicted RBP3.63□□□□□ -1.83
SHH3YMR118C ASI1P54074 624 aa3.63□□□□□ -1.83
SHH3YMR118C UBX4P54730 416 aa3.63□□□□□ -1.83
SHH3YMR118C RPM2Q02773 1202 aa3.63□□□□□ -1.83
SHH3YMR118C SEN54Q02825 467 aaPredicted RBP3.63□□□□□ -1.83
SHH3YMR118C ATG16Q03818 150 aa3.63□□□□□ -1.83
SHH3YMR118C HMO1Q03973 246 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C PPM1Q04081 328 aa3.63□□□□□ -1.83
SHH3YMR118C YMR027WQ04371 470 aa3.63□□□□□ -1.83
SHH3YMR118C DON1Q05610 365 aa3.63□□□□□ -1.83
SHH3YMR118C YDR278CQ05612 105 aa3.63□□□□□ -1.83
SHH3YMR118C FUS2Q05670 677 aa3.63□□□□□ -1.83
SHH3YMR118C EMG1Q06287 252 aaKnown RBP3.63□□□□□ -1.83
SHH3YMR118C YDL057WQ07379 328 aa3.63□□□□□ -1.83
SHH3YMR118C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SHH3YMR118C KEL3Q08979 651 aaPredicted RBP3.63□□□□□ -1.83
SHH3YMR118C YPL277CQ08989 487 aa3.63□□□□□ -1.83
SHH3YMR118C TAF3Q12297 353 aa3.63□□□□□ -1.83
SHH3YMR118C IES3Q12345 250 aa3.63□□□□□ -1.83
SHH3YMR118C TRM11Q12463 433 aa3.63□□□□□ -1.83
SHH3YMR118C FLO1P32768 1537 aa3.63□□□□□ -1.83
SHH3YMR118C FIG2P25653 1609 aa3.62□□□□□ -1.83
SHH3YMR118C CBF1P17106 351 aa3.62□□□□□ -1.83
SHH3YMR118C URA4P20051 364 aa3.62□□□□□ -1.83
SHH3YMR118C ADE2P21264 571 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C KAR4P25583 335 aa3.62□□□□□ -1.83
SHH3YMR118C PWP2P25635 923 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C CDC48P25694 835 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C HEM3P28789 327 aa3.62□□□□□ -1.83
SHH3YMR118C CHS3P29465 1165 aa3.62□□□□□ -1.83
SHH3YMR118C CDC3P32457 520 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C FRD1P32614 470 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C SLA2P33338 968 aa3.62□□□□□ -1.83
SHH3YMR118C SET3P36124 751 aa3.62□□□□□ -1.83
SHH3YMR118C YKR078WP36158 585 aaKnown RBP3.62□□□□□ -1.83
SHH3YMR118C EXO5P38289 585 aa3.62□□□□□ -1.83
SHH3YMR118C POP4P38336 279 aa3.62□□□□□ -1.83
SHH3YMR118C SPC97P38863 823 aa3.62□□□□□ -1.83
SHH3YMR118C VPS45P38932 577 aa3.62□□□□□ -1.83
SHH3YMR118C NUP60P39705 539 aa3.62□□□□□ -1.83
SHH3YMR118C YMR134WP40207 237 aa3.62□□□□□ -1.83
SHH3YMR118C LEM3P42838 414 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms