RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C CAF20P12962 161 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C EMC1P25574 760 aa1.45□□□□□ -2.18
NUP188YML103C SEC21P32074 935 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C LIP5P32875 414 aa1.45□□□□□ -2.18
NUP188YML103C YJL206CP39529 758 aa1.45□□□□□ -2.18
NUP188YML103C CAB2P40506 365 aa1.45□□□□□ -2.18
NUP188YML103C SKP2P42843 763 aa1.45□□□□□ -2.18
NUP188YML103C LSB3P43603 459 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C ARC1P46672 376 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C CTF18P49956 741 aa1.45□□□□□ -2.18
NUP188YML103C SPT20P50875 604 aa1.45□□□□□ -2.18
NUP188YML103C MDR1P53258 950 aa1.45□□□□□ -2.18
NUP188YML103C TRS130Q03660 1102 aa1.45□□□□□ -2.18
NUP188YML103C DUS4Q06063 367 aa1.45□□□□□ -2.18
NUP188YML103C YSH1Q06224 779 aaPredicted RBP1.45□□□□□ -2.18
NUP188YML103C CWC2Q12046 339 aaPredicted RBP1.45□□□□□ -2.18
NUP188YML103C RPS9BP05755 195 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C YEL076C-AP0CX16 216 aa1.45□□□□□ -2.18
NUP188YML103C YLR464WP0CX17 216 aa1.45□□□□□ -2.18
NUP188YML103C CAP1P28495 268 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C DBF20P32328 564 aa1.45□□□□□ -2.18
NUP188YML103C HXT4P32467 576 aa1.45□□□□□ -2.18
NUP188YML103C SAC6P32599 642 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C YEL076CP39971 216 aa1.45□□□□□ -2.18
NUP188YML103C NOP16P40007 231 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C PHM8P40025 321 aa1.45□□□□□ -2.18
NUP188YML103C VHR1P40522 640 aa1.45□□□□□ -2.18
NUP188YML103C GTR1Q00582 310 aa1.45□□□□□ -2.18
NUP188YML103C YLR224WQ05947 369 aa1.45□□□□□ -2.18
NUP188YML103C NUS1Q12063 375 aa1.45□□□□□ -2.18
NUP188YML103C ERG27Q12452 347 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C MCM3P24279 971 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C DCG1P32460 244 aa1.45□□□□□ -2.18
NUP188YML103C YPT7P32939 208 aa1.45□□□□□ -2.18
NUP188YML103C YKR073CP36153 106 aa1.45□□□□□ -2.18
NUP188YML103C YJL193WP39542 402 aa1.45□□□□□ -2.18
NUP188YML103C SWD1P39706 426 aa1.45□□□□□ -2.18
NUP188YML103C SLN1P39928 1220 aaPredicted RBP1.45□□□□□ -2.18
NUP188YML103C ARG2P40360 574 aa1.45□□□□□ -2.18
NUP188YML103C OPT1P40897 799 aa1.45□□□□□ -2.18
NUP188YML103C ASE1P50275 885 aa1.45□□□□□ -2.18
NUP188YML103C GFD1Q04839 188 aaKnown RBP1.45□□□□□ -2.18
NUP188YML103C TGS1Q12052 315 aa1.45□□□□□ -2.18
NUP188YML103C YBR255C-AQ3E776 120 aa1.45□□□□□ -2.18
NUP188YML103C CDC31P06704 161 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C PRP6P19735 899 aaPredicted RBP1.44□□□□□ -2.18
NUP188YML103C ADE2P21264 571 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C RPD3P32561 433 aa1.44□□□□□ -2.18
NUP188YML103C NPL6P32832 435 aa1.44□□□□□ -2.18
NUP188YML103C CNS1P33313 385 aa1.44□□□□□ -2.18
NUP188YML103C YHR033WP38690 423 aa1.44□□□□□ -2.18
NUP188YML103C FMP52P40008 231 aa1.44□□□□□ -2.18
NUP188YML103C DJP1P40564 432 aa1.44□□□□□ -2.18
NUP188YML103C RPN11P43588 306 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C COX18P53239 316 aa1.44□□□□□ -2.18
NUP188YML103C ISA1Q07821 250 aaPredicted RBP1.44□□□□□ -2.18
NUP188YML103C SCM3Q12334 223 aa1.44□□□□□ -2.18
NUP188YML103C SIR3P06701 978 aa1.44□□□□□ -2.18
NUP188YML103C FUM1P08417 488 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C CDC6P09119 513 aa1.44□□□□□ -2.18
NUP188YML103C TUB3P09734 445 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C VPS33P20795 691 aa1.44□□□□□ -2.18
NUP188YML103C RNR1P21524 888 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C PDE1P22434 369 aa1.44□□□□□ -2.18
NUP188YML103C MUM2P38236 366 aa1.44□□□□□ -2.18
NUP188YML103C PIH1P38768 344 aa1.44□□□□□ -2.18
NUP188YML103C RPP1P38786 293 aa1.44□□□□□ -2.18
NUP188YML103C SCS2P40075 244 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C YIL161WP40449 235 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C GSM1P42950 618 aa1.44□□□□□ -2.18
NUP188YML103C BST1P43571 1029 aa1.44□□□□□ -2.18
NUP188YML103C IDS2P46958 469 aa1.44□□□□□ -2.18
NUP188YML103C MNT2P53059 558 aa1.44□□□□□ -2.18
NUP188YML103C TIM44Q01852 431 aa1.44□□□□□ -2.18
NUP188YML103C SSL1Q04673 461 aaPredicted RBP1.44□□□□□ -2.18
NUP188YML103C YDL073WQ07454 984 aa1.44□□□□□ -2.18
NUP188YML103C BAG7Q12128 409 aa1.44□□□□□ -2.18
NUP188YML103C MED1Q12321 566 aa1.44□□□□□ -2.18
NUP188YML103C GPR1Q12361 961 aa1.44□□□□□ -2.18
NUP188YML103C NOP58Q12499 511 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C YMR084WA2P2R3 262 aa1.44□□□□□ -2.18
NUP188YML103C NUC1P08466 329 aa1.44□□□□□ -2.18
NUP188YML103C SER1P33330 395 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C OMA1P36163 345 aa1.44□□□□□ -2.18
NUP188YML103C POL12P38121 705 aaPredicted RBP1.44□□□□□ -2.18
NUP188YML103C FAT1P38225 669 aa1.44□□□□□ -2.18
NUP188YML103C TDP1P38319 544 aa1.44□□□□□ -2.18
NUP188YML103C YEL025CP39991 1188 aa1.44□□□□□ -2.18
NUP188YML103C KHA1P40309 873 aa1.44□□□□□ -2.18
NUP188YML103C ELO3P40319 345 aa1.44□□□□□ -2.18
NUP188YML103C PSF2P40359 213 aa1.44□□□□□ -2.18
NUP188YML103C RIC1P40395 1056 aa1.44□□□□□ -2.18
NUP188YML103C UBP7P40453 1071 aa1.44□□□□□ -2.18
NUP188YML103C IST3P40565 148 aaPredicted RBP1.44□□□□□ -2.18
NUP188YML103C ARF3P40994 183 aaRIP-Chip data1.44□□□□□ -2.18not detected
NUP188YML103C GTB1Q04924 702 aa1.44□□□□□ -2.18
NUP188YML103C OMS1Q06668 471 aa1.44□□□□□ -2.18
NUP188YML103C STP4Q07351 490 aa1.44□□□□□ -2.18
NUP188YML103C ETT1Q08421 412 aaKnown RBP1.44□□□□□ -2.18
NUP188YML103C SSP2Q08646 371 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms