RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C PNP1Q05788 311 aa9.56□□□□□ -0.88
SEC61YLR378C SFH1Q06168 426 aa9.56□□□□□ -0.88
SEC61YLR378C FRA1Q07825 749 aa9.56□□□□□ -0.88
SEC61YLR378C THI21Q08975 551 aa9.56□□□□□ -0.88
SEC61YLR378C FAP7Q12055 197 aaPredicted RBP9.56□□□□□ -0.88
SEC61YLR378C POL3P15436 1097 aa9.55□□□□□ -0.88
SEC61YLR378C KGD2P19262 463 aaPredicted RBP9.55□□□□□ -0.88
SEC61YLR378C SLA2P33338 968 aa9.55□□□□□ -0.88
SEC61YLR378C RGD1P38339 666 aa9.55□□□□□ -0.88
SEC61YLR378C VPS41P38959 992 aa9.55□□□□□ -0.88
SEC61YLR378C XDJ1P39102 459 aa9.55□□□□□ -0.88
SEC61YLR378C YGR283CP53336 341 aaPredicted RBP9.55□□□□□ -0.88
SEC61YLR378C COG6P53959 839 aa9.55□□□□□ -0.88
SEC61YLR378C SHR3Q02774 210 aa9.55□□□□□ -0.88
SEC61YLR378C YPL034WQ03083 165 aa9.55□□□□□ -0.88
SEC61YLR378C YDL073WQ07454 984 aa9.55□□□□□ -0.88
SEC61YLR378C ARG4P04076 463 aaPredicted RBP9.54□□□□□ -0.88
SEC61YLR378C TPK1P06244 397 aa9.54□□□□□ -0.88
SEC61YLR378C RAD10P06838 210 aa9.54□□□□□ -0.88
SEC61YLR378C MSH1P25846 959 aa9.54□□□□□ -0.88
SEC61YLR378C TKL2P33315 681 aa9.54□□□□□ -0.88
SEC61YLR378C FLC2P39719 783 aa9.54□□□□□ -0.88
SEC61YLR378C SAW1P39735 261 aa9.54□□□□□ -0.88
SEC61YLR378C ELP3Q02908 557 aaKnown RBP9.54□□□□□ -0.88
SEC61YLR378C MSH6Q03834 1242 aa9.54□□□□□ -0.88
SEC61YLR378C ECM30Q06673 1274 aa9.54□□□□□ -0.88
SEC61YLR378C GPM2Q12008 311 aa9.54□□□□□ -0.88
SEC61YLR378C MRPL25P23369 157 aa9.53□□□□□ -0.88
SEC61YLR378C ILV6P25605 309 aaKnown RBP9.53□□□□□ -0.88
SEC61YLR378C MGT1P26188 188 aa9.53□□□□□ -0.88
SEC61YLR378C GPI10P30777 616 aa9.53□□□□□ -0.88
SEC61YLR378C POA1P38218 177 aa9.53□□□□□ -0.88
SEC61YLR378C HSL7P38274 827 aa9.53□□□□□ -0.88
SEC61YLR378C SLX1P38324 304 aa9.53□□□□□ -0.88
SEC61YLR378C YHR202WP38887 602 aa9.53□□□□□ -0.88
SEC61YLR378C RAD55P38953 406 aa9.53□□□□□ -0.88
SEC61YLR378C AVT2P39981 480 aa9.53□□□□□ -0.88
SEC61YLR378C SMX2P40204 77 aaKnown RBP9.53□□□□□ -0.88
SEC61YLR378C RRD1P40454 393 aaKnown RBP9.53□□□□□ -0.88
SEC61YLR378C YFL040WP43562 540 aa9.53□□□□□ -0.88
SEC61YLR378C URB2P47108 1174 aa9.53□□□□□ -0.88
SEC61YLR378C SND1Q04007 877 aa9.53□□□□□ -0.88
SEC61YLR378C YMR027WQ04371 470 aa9.53□□□□□ -0.88
SEC61YLR378C TPO1Q07824 586 aa9.53□□□□□ -0.88
SEC61YLR378C YOR223WQ12015 292 aa9.53□□□□□ -0.88
SEC61YLR378C RRD2Q12461 358 aa9.53□□□□□ -0.88
SEC61YLR378C CMD1P06787 147 aaKnown RBP9.52□□□□□ -0.89
SEC61YLR378C CDC24P11433 854 aaPredicted RBP9.52□□□□□ -0.89
SEC61YLR378C CBF1P17106 351 aa9.52□□□□□ -0.89
SEC61YLR378C OAF3P36023 863 aa9.52□□□□□ -0.89
SEC61YLR378C GRS1P38088 690 aaKnown RBP9.52□□□□□ -0.89
SEC61YLR378C DUG2P38149 878 aa9.52□□□□□ -0.89
SEC61YLR378C YJL045WP47052 634 aa9.52□□□□□ -0.89
SEC61YLR378C VTC4P47075 721 aa9.52□□□□□ -0.89
SEC61YLR378C PEX31P53203 462 aa9.52□□□□□ -0.89
SEC61YLR378C CDC73Q06697 393 aa9.52□□□□□ -0.89
SEC61YLR378C RCL1Q08096 367 aaPredicted RBP9.52□□□□□ -0.89
SEC61YLR378C RPB2P08518 1224 aaKnown RBP9.51□□□□□ -0.89
SEC61YLR378C PYC1P11154 1178 aaKnown RBP9.51□□□□□ -0.89
SEC61YLR378C SLD2P34252 453 aa9.51□□□□□ -0.89
SEC61YLR378C SQT1P35184 431 aa9.51□□□□□ -0.89
SEC61YLR378C DIA4P38705 446 aaPredicted RBP9.51□□□□□ -0.89
SEC61YLR378C MSR1P38714 643 aa9.51□□□□□ -0.89
SEC61YLR378C TGL3P40308 642 aa9.51□□□□□ -0.89
SEC61YLR378C MKT1P40850 830 aaKnown RBP9.51□□□□□ -0.89
SEC61YLR378C PCL10P53124 433 aa9.51□□□□□ -0.89
SEC61YLR378C YNL011CP53980 444 aa9.51□□□□□ -0.89
SEC61YLR378C MRS2Q01926 470 aa9.51□□□□□ -0.89
SEC61YLR378C DDC1Q08949 612 aa9.51□□□□□ -0.89
SEC61YLR378C NBP2Q12163 236 aa9.51□□□□□ -0.89
SEC61YLR378C YLL056CQ12177 298 aa9.51□□□□□ -0.89
SEC61YLR378C QCR6P00127 147 aa9.5□□□□□ -0.89
SEC61YLR378C MSD1P15179 658 aaKnown RBP9.5□□□□□ -0.89
SEC61YLR378C VPH1P32563 840 aaKnown RBP9.5□□□□□ -0.89
SEC61YLR378C CKB2P38930 258 aa9.5□□□□□ -0.89
SEC61YLR378C YEL023CP39992 682 aa9.5□□□□□ -0.89
SEC61YLR378C DSN1P40568 576 aa9.5□□□□□ -0.89
SEC61YLR378C FOL2P51601 243 aaKnown RBP9.5□□□□□ -0.89
SEC61YLR378C SLG1P54867 378 aa9.5□□□□□ -0.89
SEC61YLR378C USA1Q03714 838 aa9.5□□□□□ -0.89
SEC61YLR378C IZH4Q99393 312 aa9.5□□□□□ -0.89
SEC61YLR378C ADK2P26364 225 aa9.49□□□□□ -0.89
SEC61YLR378C MET4P32389 672 aa9.49□□□□□ -0.89
SEC61YLR378C HMT1P38074 348 aa9.49□□□□□ -0.89
SEC61YLR378C APN2P38207 520 aa9.49□□□□□ -0.89
SEC61YLR378C YBR053CP38235 358 aa9.49□□□□□ -0.89
SEC61YLR378C SCC4P40090 624 aa9.49□□□□□ -0.89
SEC61YLR378C CDC1P40986 491 aa9.49□□□□□ -0.89
SEC61YLR378C TRS85P46944 698 aa9.49□□□□□ -0.89
SEC61YLR378C ALY2P47029 1046 aa9.49□□□□□ -0.89
SEC61YLR378C RFX1P48743 811 aa9.49□□□□□ -0.89
SEC61YLR378C RTA1P53047 317 aa9.49□□□□□ -0.89
SEC61YLR378C ZIP2P53061 704 aa9.49□□□□□ -0.89
SEC61YLR378C AAD4Q07747 329 aa9.49□□□□□ -0.89
SEC61YLR378C HEM15P16622 393 aa9.48□□□□□ -0.89
SEC61YLR378C KAR4P25583 335 aa9.48□□□□□ -0.89
SEC61YLR378C YCR015CP25616 317 aa9.48□□□□□ -0.89
SEC61YLR378C TPS2P31688 896 aaKnown RBP9.48□□□□□ -0.89
SEC61YLR378C RAD26P40352 1085 aa9.48□□□□□ -0.89
SEC61YLR378C TAF1P46677 1066 aa9.48□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms