RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	ATG12	P38316	186 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	EXO1	P39875	702 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	TMN3	P40071	706 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	SEC9	P40357	651 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	SEC28	P40509	296 aa	Known RBP	4.09	□□□□□ -1.76
LOS1	YKL205W	UFO1	Q04511	668 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	FAP7	Q12055	197 aa	Predicted RBP	4.09	□□□□□ -1.76
LOS1	YKL205W	YDR018C	Q12185	396 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	YOL098C	Q12496	1037 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	NOT5	Q12514	560 aa	Predicted RBP	4.09	□□□□□ -1.76
LOS1	YKL205W	PHO84	P25297	587 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	DAL2	P25335	343 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	CDC10	P25342	322 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	PHO87	P25360	923 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	RRT12	P25381	491 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	GAC1	P28006	793 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	DBF4	P32325	704 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	MSR1	P38714	643 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	AXL2	P38928	823 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	SIP5	P40210	489 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	DPH1	P40487	425 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	LSB3	P43603	459 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	ALT2	P52892	507 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	DIG1	Q03063	452 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	SOV1	Q04748	898 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	TAF9	Q05027	157 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	LCB5	Q06147	687 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	NUT2	Q06213	157 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	CUE5	Q08412	411 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	ILV2	P07342	687 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	MSH3	P25336	1018 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	SWE1	P32944	819 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	YKL050C	P35736	922 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	VRP1	P37370	817 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	APN2	P38207	520 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	DLD2	P46681	530 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	YJL132W	P47014	750 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	DRN1	P53255	507 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	YLR012C	Q07927	99 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	RRP6	Q12149	733 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	SLP1	Q12232	587 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	TFC8	Q12308	588 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	ENO2	P00925	437 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	RAD16	P31244	790 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	DRE2	P36152	348 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	MRPL40	P36534	297 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	LAM1	P38851	1228 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	SSP1	P38871	571 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	SMF1	P38925	575 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	TGL3	P40308	642 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	ELO3	P40319	345 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	LEE1	Q02799	301 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	YML082W	Q04533	649 aa	Known RBP	4.08	□□□□□ -1.76
LOS1	YKL205W	MDM38	Q08179	573 aa		4.08	□□□□□ -1.76
LOS1	YKL205W	IME1	P21190	360 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	YCR051W	P25631	222 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	HEM12	P32347	362 aa	Predicted RBP	4.07	□□□□□ -1.76
LOS1	YKL205W	RRT2	P38332	387 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	RTT107	P38850	1070 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	NDC80	P40460	691 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	MGA2	P40578	1113 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	GCD14	P46959	383 aa	Predicted RBP	4.07	□□□□□ -1.76
LOS1	YKL205W	SHR3	Q02774	210 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	TFB2	Q02939	513 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	NBP2	Q12163	236 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	AI3	P03877	415 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	GCR1	P07261	785 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	YCR015C	P25616	317 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	PRR1	P28708	518 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	SEC1	P30619	724 aa	Known RBP	4.07	□□□□□ -1.76
LOS1	YKL205W	TFC3	P34111	1160 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	HIS2	P38635	335 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	FSH1	P38777	243 aa	Known RBP	4.07	□□□□□ -1.76
LOS1	YKL205W	CAJ1	P39101	391 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	YHB1	P39676	399 aa	Known RBP	4.07	□□□□□ -1.76
LOS1	YKL205W	RRD1	P40454	393 aa	Known RBP	4.07	□□□□□ -1.76
LOS1	YKL205W	RTA1	P53047	317 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	NUT1	P53114	1132 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	GND2	P53319	492 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	PIR3	Q03180	325 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	PRM6	Q04705	352 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	RGA2	Q06407	1009 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	RMD5	Q12508	421 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	ZPS1	Q12512	249 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	YOR338W	Q99326	363 aa		4.07	□□□□□ -1.76
LOS1	YKL205W	JIP3	O13555	125 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	PRP9	P19736	530 aa	Known RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	RIP-Chip
LOS1	YKL205W	SRB2	P34162	210 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	NCL1	P38205	684 aa	Known RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	YBR225W	P38321	900 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	IST3	P40565	148 aa	Predicted RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	STE23	Q06010	1027 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	CDD1	Q06549	142 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	SHS1	Q07657	551 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	ADY3	Q07732	790 aa		4.06	□□□□□ -1.76
LOS1	YKL205W	RCL1	Q08096	367 aa	Predicted RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	LEA1	Q08963	238 aa	Predicted RBP	4.06	□□□□□ -1.76
LOS1	YKL205W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
LOS1	YKL205W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms