RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C VBA5P36172 582 aa6.02□□□□□ -1.45
SEC20YDR498C DUG2P38149 878 aa6.02□□□□□ -1.45
SEC20YDR498C APM2P38700 605 aa6.02□□□□□ -1.45
SEC20YDR498C BRL1P38770 471 aa6.02□□□□□ -1.45
SEC20YDR498C YMR134WP40207 237 aa6.02□□□□□ -1.45
SEC20YDR498C ALT1P52893 592 aa6.02□□□□□ -1.45
SEC20YDR498C ELP3Q02908 557 aaKnown RBP6.02□□□□□ -1.45
SEC20YDR498C YMR102CQ03177 834 aa6.02□□□□□ -1.45
SEC20YDR498C TFB3Q03290 321 aa6.02□□□□□ -1.45
SEC20YDR498C VPS72Q03388 795 aa6.02□□□□□ -1.45
SEC20YDR498C IVY1Q04934 453 aa6.02□□□□□ -1.45
SEC20YDR498C TAF9Q05027 157 aa6.02□□□□□ -1.45
SEC20YDR498C OMS1Q06668 471 aa6.02□□□□□ -1.45
SEC20YDR498C YPR097WQ06839 1073 aa6.02□□□□□ -1.45
SEC20YDR498C TRE1Q08919 783 aa6.02□□□□□ -1.45
SEC20YDR498C VPS54Q12071 889 aa6.02□□□□□ -1.45
SEC20YDR498C YDR018CQ12185 396 aa6.02□□□□□ -1.45
SEC20YDR498C EMP46Q12396 444 aa6.02□□□□□ -1.45
SEC20YDR498C CTF3Q12748 733 aa6.02□□□□□ -1.45
SEC20YDR498C RPB2P08518 1224 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C YCR051WP25631 222 aa6.01□□□□□ -1.45
SEC20YDR498C HXT3P32466 567 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C SKG6P32900 734 aaPredicted RBP6.01□□□□□ -1.45
SEC20YDR498C DUR3P33413 735 aa6.01□□□□□ -1.45
SEC20YDR498C OAF3P36023 863 aa6.01□□□□□ -1.45
SEC20YDR498C GDT1P38301 280 aaPredicted RBP6.01□□□□□ -1.45
SEC20YDR498C PCA1P38360 1216 aa6.01□□□□□ -1.45
SEC20YDR498C YAP1801P38856 637 aa6.01□□□□□ -1.45
SEC20YDR498C NMD3P38861 518 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C SAK1P38990 1142 aa6.01□□□□□ -1.45
SEC20YDR498C SAW1P39735 261 aa6.01□□□□□ -1.45
SEC20YDR498C RPT2P40327 437 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C AZR1P50080 613 aa6.01□□□□□ -1.45
SEC20YDR498C MND1P53102 219 aa6.01□□□□□ -1.45
SEC20YDR498C ALG11P53954 548 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C YML020WQ03722 664 aa6.01□□□□□ -1.45
SEC20YDR498C ERV41Q04651 352 aa6.01□□□□□ -1.45
SEC20YDR498C KAP95Q06142 861 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C YLR455WQ06188 304 aa6.01□□□□□ -1.45
SEC20YDR498C TDA5Q06417 326 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C FRA1Q07825 749 aa6.01□□□□□ -1.45
SEC20YDR498C SDH5Q08230 162 aa6.01□□□□□ -1.45
SEC20YDR498C RRD2Q12461 358 aa6.01□□□□□ -1.45
SEC20YDR498C TIF6Q12522 245 aaKnown RBP6.01□□□□□ -1.45
SEC20YDR498C TPK1P06244 397 aa6□□□□□ -1.45
SEC20YDR498C TUB3P09734 445 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C ADH4P10127 382 aa6□□□□□ -1.45
SEC20YDR498C PUT4P15380 627 aa6□□□□□ -1.45
SEC20YDR498C VMA4P22203 233 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C UBC6P33296 250 aaPredicted RBP6□□□□□ -1.45
SEC20YDR498C GPT2P36148 743 aa6□□□□□ -1.45
SEC20YDR498C APN2P38207 520 aa6□□□□□ -1.45
SEC20YDR498C OLA1P38219 394 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C FLC2P39719 783 aa6□□□□□ -1.45
SEC20YDR498C DSE1P40077 573 aa6□□□□□ -1.45
SEC20YDR498C RRD1P40454 393 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C TMA108P40462 946 aa6□□□□□ -1.45
SEC20YDR498C MAF1P41910 395 aa6□□□□□ -1.45
SEC20YDR498C YGR130CP53278 816 aa6□□□□□ -1.45
SEC20YDR498C RPL22BP56628 122 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C ARO80Q04052 950 aa6□□□□□ -1.45
SEC20YDR498C YOR022CQ12204 715 aa6□□□□□ -1.45
SEC20YDR498C PUS1Q12211 544 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C MDM20Q12387 796 aaKnown RBP6□□□□□ -1.45
SEC20YDR498C RTP1Q12751 981 aa6□□□□□ -1.45
SEC20YDR498C ILV2P07342 687 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C SNA3P14359 133 aa5.99□□□□□ -1.45
SEC20YDR498C AFT1P22149 690 aa5.99□□□□□ -1.45
SEC20YDR498C ILV6P25605 309 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C CDC20P26309 610 aa5.99□□□□□ -1.45
SEC20YDR498C SEC1P30619 724 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C EFB1P32471 206 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C AIM26P32858 118 aa5.99□□□□□ -1.45
SEC20YDR498C DRE2P36152 348 aa5.99□□□□□ -1.45
SEC20YDR498C YMC2P38087 329 aa5.99□□□□□ -1.45
SEC20YDR498C YBR032WP38223 100 aa5.99□□□□□ -1.45
SEC20YDR498C SWC5P38326 303 aa5.99□□□□□ -1.45
SEC20YDR498C AVT2P39981 480 aa5.99□□□□□ -1.45
SEC20YDR498C ARG2P40360 574 aa5.99□□□□□ -1.45
SEC20YDR498C AIR1P40507 360 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C ALA1P40825 983 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C LAM5P43560 674 aa5.99□□□□□ -1.45
SEC20YDR498C YJR107WP47145 328 aa5.99□□□□□ -1.45
SEC20YDR498C YNL011CP53980 444 aa5.99□□□□□ -1.45
SEC20YDR498C CDC55Q00362 526 aa5.99□□□□□ -1.45
SEC20YDR498C YPL062WQ02781 134 aa5.99□□□□□ -1.45
SEC20YDR498C MZM1Q03429 123 aaPredicted RBP5.99□□□□□ -1.45
SEC20YDR498C THI7Q05998 598 aa5.99□□□□□ -1.45
SEC20YDR498C FAP7Q12055 197 aaPredicted RBP5.99□□□□□ -1.45
SEC20YDR498C RUD3Q12234 484 aaKnown RBP5.99□□□□□ -1.45
SEC20YDR498C PCD1Q12524 340 aa5.99□□□□□ -1.45
SEC20YDR498C YOL087CQ99247 1116 aa5.99□□□□□ -1.45
SEC20YDR498C TEF1P02994 458 aaKnown RBP5.98□□□□□ -1.45
SEC20YDR498C CDC24P11433 854 aaPredicted RBP5.98□□□□□ -1.45
SEC20YDR498C PMS1P14242 873 aa5.98□□□□□ -1.45
SEC20YDR498C POL3P15436 1097 aa5.98□□□□□ -1.45
SEC20YDR498C MGT1P26188 188 aa5.98□□□□□ -1.45
SEC20YDR498C CYS3P31373 394 aaKnown RBP5.98□□□□□ -1.45
SEC20YDR498C FRE1P32791 686 aa5.98□□□□□ -1.45
SEC20YDR498C YME1P32795 747 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms