RNA–Protein interactions for RNA: YDR479C

PEX29, Transcript of Peroxisomal integral membrane peroxin, yeast

Gene PEX29, Length 1,665 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX29	YDR479C	TOF1	P53840	1238 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	GPI13	Q07830	1017 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	MLH2	Q07980	695 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	RSA1	Q08932	381 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	FAP7	Q12055	197 aa	Predicted RBP	4.91	□□□□□ -1.62
PEX29	YDR479C	TIP41	Q12199	356 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	MNL2	Q12205	849 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	DBP10	Q12389	995 aa	Known RBP	4.91	□□□□□ -1.62
PEX29	YDR479C	STB3	Q12427	513 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	APC2	Q12440	853 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	YPT6	Q99260	215 aa		4.91	□□□□□ -1.62
PEX29	YDR479C	MSS116	P15424	664 aa	Known RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	MRPL25	P23369	157 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	HSP30	P25619	332 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	AFG2	P32794	780 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	DUR3	P33413	735 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	HCS1	P34243	683 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	RER2	P35196	286 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	MET1	P36150	593 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	LDH1	P38139	375 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	PPS1	P38148	807 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	GGA2	P38817	585 aa	Known RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	HXT8	P40886	569 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	RGD2	P43556	714 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	HAM1	P47119	197 aa	Known RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	ATP22	P50273	684 aa	Predicted RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	USE1	P53146	245 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	CUZ1	P53899	274 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	SLU7	Q02775	382 aa	Known RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	EEB1	Q02891	456 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	GPI17	Q04080	534 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	ARP9	Q05123	467 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	ALE1	Q08548	619 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	RKM1	Q08961	583 aa	Predicted RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	AIM41	Q12032	185 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	SSF2	Q12153	453 aa	Predicted RBP	4.9	□□□□□ -1.62
PEX29	YDR479C	NBL1	Q3E7Y6	73 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	RAD61	Q99359	647 aa		4.9	□□□□□ -1.62
PEX29	YDR479C	NUC1	P08466	329 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	SEC15	P22224	910 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	YKL222C	P35995	705 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	ECM2	P38241	364 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	ERG7	P38604	731 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	DYS1	P38791	387 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	CRG1	P38892	291 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
PEX29	YDR479C	SWP82	P43554	623 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	YJR054W	P47114	497 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	VMA10	P48836	114 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	RNR4	P49723	345 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	TAF6	P53040	516 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	RIM8	P53179	542 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PEX29	YDR479C	YNR040W	P53736	256 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	SRL4	Q03085	281 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	FMP42	Q04991	504 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	SEC10	Q06245	871 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	RTT10	Q08924	1013 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	ILV2	P07342	687 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	YJU2	P28320	278 aa	Predicted RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	VPS21	P36017	210 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	SPC42	P36094	363 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	PGM2	P37012	569 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	PFF1	P38244	976 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	SLM4	P38247	162 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	RCK2	P38623	610 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	YHR020W	P38708	688 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	AVT6	P40074	448 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	DPH1	P40487	425 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	MMM1	P41800	426 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	DIM1	P41819	318 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	SKP1	P52286	194 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	ZIP2	P53061	704 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	MON1	P53129	644 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	YNL193W	P53870	558 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	UBX4	P54730	416 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	MDM1	Q01846	1127 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	UTP6	Q02354	440 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	TDA9	Q04545	1251 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	MCM21	Q06675	368 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	SMC5	Q08204	1093 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	SGO1	Q08490	590 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	YPL216W	Q08964	1102 aa		4.89	□□□□□ -1.63
PEX29	YDR479C	CDC53	Q12018	815 aa	Known RBP	4.89	□□□□□ -1.63
PEX29	YDR479C	PGK1	P00560	416 aa	Known RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	PET494	P07390	489 aa	Predicted RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	YML002W	P0CF17	737 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	HSF1	P10961	833 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	ATR1	P13090	542 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	SEC18	P18759	758 aa	Known RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	PRP6	P19735	899 aa	Predicted RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	URE2	P23202	354 aa	Known RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	RPT5	P33297	434 aa	Known RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	XRS2	P33301	854 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	SNL1	P40548	159 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	RLP7	P40693	322 aa	Known RBP	4.88	□□□□□ -1.63
PEX29	YDR479C	DAK2	P43550	591 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	YJL055W	P47044	245 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	JJJ3	P47138	172 aa		4.88	□□□□□ -1.63
PEX29	YDR479C	NSG2	P53898	299 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms