RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C BI3Q9ZZW7 517 aa6.51□□□□□ -1.37
VPS61YDR136C TY1B-AO13527 1196 aaKnown RBP6.5□□□□□ -1.37
VPS61YDR136C SAM1P10659 382 aaKnown RBP6.5□□□□□ -1.37
VPS61YDR136C COX11P19516 300 aaKnown RBP6.5□□□□□ -1.37
VPS61YDR136C SPS22P25380 463 aa6.5□□□□□ -1.37
VPS61YDR136C MLS1P30952 554 aa6.5□□□□□ -1.37
VPS61YDR136C TMT1P32643 299 aa6.5□□□□□ -1.37
VPS61YDR136C PEX2P32800 271 aa6.5□□□□□ -1.37
VPS61YDR136C ATG19P35193 415 aa6.5□□□□□ -1.37
VPS61YDR136C APM2P38700 605 aa6.5□□□□□ -1.37
VPS61YDR136C FTR1P40088 404 aa6.5□□□□□ -1.37
VPS61YDR136C YER156CP40093 338 aaKnown RBP6.5□□□□□ -1.37
VPS61YDR136C ALG5P40350 334 aa6.5□□□□□ -1.37
VPS61YDR136C JEM1P40358 645 aa6.5□□□□□ -1.37
VPS61YDR136C ARG2P40360 574 aa6.5□□□□□ -1.37
VPS61YDR136C PFK26P40433 827 aaKnown RBP6.5□□□□□ -1.37
VPS61YDR136C SAE2P46946 345 aa6.5□□□□□ -1.37
VPS61YDR136C EAF6P47128 113 aa6.5□□□□□ -1.37
VPS61YDR136C HLJ1P48353 224 aa6.5□□□□□ -1.37
VPS61YDR136C RIM21P48565 533 aa6.5□□□□□ -1.37
VPS61YDR136C CTR1P49573 406 aa6.5□□□□□ -1.37
VPS61YDR136C HSH155P49955 971 aaKnown RBP6.5□□□□□ -1.37
VPS61YDR136C SLT2Q00772 484 aa6.5□□□□□ -1.37
VPS61YDR136C UBP2Q01476 1272 aa6.5□□□□□ -1.37
VPS61YDR136C ATP25Q03153 612 aa6.5□□□□□ -1.37
VPS61YDR136C FMN1Q03778 218 aa6.5□□□□□ -1.37
VPS61YDR136C YPR084WQ06821 456 aa6.5□□□□□ -1.37
VPS61YDR136C TRE1Q08919 783 aa6.5□□□□□ -1.37
VPS61YDR136C YLR053CQ12026 108 aa6.5□□□□□ -1.37
VPS61YDR136C NOT5Q12514 560 aaPredicted RBP6.5□□□□□ -1.37
VPS61YDR136C ECM3Q99252 613 aa6.5□□□□□ -1.37
VPS61YDR136C ILS1P09436 1072 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C SSC1P0CS90 654 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C MSR1P38714 643 aa6.49□□□□□ -1.37
VPS61YDR136C OAF1P39720 1047 aaPredicted RBP6.49□□□□□ -1.37
VPS61YDR136C TMN3P40071 706 aa6.49□□□□□ -1.37
VPS61YDR136C TMA108P40462 946 aa6.49□□□□□ -1.37
VPS61YDR136C PRK1P40494 810 aa6.49□□□□□ -1.37
VPS61YDR136C GVP36P40531 326 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C YJL045WP47052 634 aa6.49□□□□□ -1.37
VPS61YDR136C ASN1P49089 572 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C RTT102P53330 157 aa6.49□□□□□ -1.37
VPS61YDR136C BET4Q00618 327 aa6.49□□□□□ -1.37
VPS61YDR136C TRM44Q02648 567 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C DUS3Q06053 668 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C KAP95Q06142 861 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C SUB2Q07478 446 aaKnown RBP6.49□□□□□ -1.37
VPS61YDR136C NOC3Q07896 663 aaPredicted RBP6.49□□□□□ -1.37
VPS61YDR136C SMC5Q08204 1093 aa6.49□□□□□ -1.37
VPS61YDR136C GPM3Q12326 303 aa6.49□□□□□ -1.37
VPS61YDR136C YER152CP10356 443 aa6.48□□□□□ -1.37
VPS61YDR136C CDC24P11433 854 aaPredicted RBP6.48□□□□□ -1.37
VPS61YDR136C NAT1P12945 854 aaKnown RBP6.48□□□□□ -1.37
VPS61YDR136C SNA3P14359 133 aa6.48□□□□□ -1.37
VPS61YDR136C EXO70P19658 623 aa6.48□□□□□ -1.37
VPS61YDR136C IRE1P32361 1115 aa6.48□□□□□ -1.37
VPS61YDR136C DPH5P32469 300 aaPredicted RBP6.48□□□□□ -1.37
VPS61YDR136C CBF2P32504 956 aa6.48□□□□□ -1.37
VPS61YDR136C GYP6P32806 458 aa6.48□□□□□ -1.37
VPS61YDR136C MCR1P36060 302 aaKnown RBP6.48□□□□□ -1.37
VPS61YDR136C SMF2P38778 549 aa6.48□□□□□ -1.37
VPS61YDR136C NIT1P40447 199 aa6.48□□□□□ -1.37
VPS61YDR136C SBE2P42223 864 aaKnown RBP6.48□□□□□ -1.37
VPS61YDR136C SUM1P46676 1062 aa6.48□□□□□ -1.37
VPS61YDR136C PAN2P53010 1115 aaPredicted RBP6.48□□□□□ -1.37
VPS61YDR136C USE1P53146 245 aa6.48□□□□□ -1.37
VPS61YDR136C CUL3P53202 744 aa6.48□□□□□ -1.37
VPS61YDR136C DRN1P53255 507 aaKnown RBP6.48□□□□□ -1.37
VPS61YDR136C COS6P53344 381 aa6.48□□□□□ -1.37
VPS61YDR136C NOP15P53927 220 aaPredicted RBP6.48□□□□□ -1.37
VPS61YDR136C UBX4P54730 416 aa6.48□□□□□ -1.37
VPS61YDR136C CEF1Q03654 590 aaPredicted RBP6.48□□□□□ -1.37
VPS61YDR136C ADI1Q03677 179 aa6.48□□□□□ -1.37
VPS61YDR136C THI7Q05998 598 aa6.48□□□□□ -1.37
VPS61YDR136C UBX5Q06682 500 aa6.48□□□□□ -1.37
VPS61YDR136C ISA1Q07821 250 aaPredicted RBP6.48□□□□□ -1.37
VPS61YDR136C IES4Q08561 116 aa6.48□□□□□ -1.37
VPS61YDR136C SPE4Q12455 300 aa6.48□□□□□ -1.37
VPS61YDR136C TRM11Q12463 433 aa6.48□□□□□ -1.37
VPS61YDR136C CBP1P07252 654 aa6.47□□□□□ -1.37
VPS61YDR136C TAL1P15019 335 aaKnown RBP6.47□□□□□ -1.37
VPS61YDR136C MSM1P22438 575 aa6.47□□□□□ -1.37
VPS61YDR136C AAD3P25612 363 aa6.47□□□□□ -1.37
VPS61YDR136C CDC48P25694 835 aaKnown RBP6.47□□□□□ -1.37
VPS61YDR136C RPC19P28000 142 aaKnown RBP6.47□□□□□ -1.37
VPS61YDR136C MCM5P29496 775 aaKnown RBP6.47□□□□□ -1.37
VPS61YDR136C YBP1P38315 674 aa6.47□□□□□ -1.37
VPS61YDR136C SAW1P39735 261 aa6.47□□□□□ -1.37
VPS61YDR136C HMF1P40037 129 aaKnown RBP6.47□□□□□ -1.37
VPS61YDR136C KHA1P40309 873 aa6.47□□□□□ -1.37
VPS61YDR136C YJL107CP42947 387 aa6.47□□□□□ -1.37
VPS61YDR136C SHE10P53075 577 aa6.47□□□□□ -1.37
VPS61YDR136C NUT1P53114 1132 aa6.47□□□□□ -1.37
VPS61YDR136C BIO4P53630 237 aa6.47□□□□□ -1.37
VPS61YDR136C YNL146WP53906 100 aa6.47□□□□□ -1.37
VPS61YDR136C OSH6Q02201 448 aa6.47□□□□□ -1.37
VPS61YDR136C SXM1Q04175 944 aaKnown RBP6.47□□□□□ -1.37
VPS61YDR136C COQ9Q05779 260 aa6.47□□□□□ -1.37
VPS61YDR136C AVL9Q12500 764 aa6.47□□□□□ -1.37
VPS61YDR136C TEF1P02994 458 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms