RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W PEX5P35056 612 aa2.29□□□□□ -2.04
VPS8YAL002W EBP2P36049 427 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W YKR078WP36158 585 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W ACA1P39970 489 aa2.29□□□□□ -2.04
VPS8YAL002W ZAP1P47043 880 aa2.29□□□□□ -2.04
VPS8YAL002W PRP3Q03338 469 aaPredicted RBP2.29□□□□□ -2.04
VPS8YAL002W YLR352WQ06479 807 aa2.29□□□□□ -2.04
VPS8YAL002W NUP188P52593 1655 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W MIS1P09440 975 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W TPM1P17536 199 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W SWI4P25302 1093 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W KRR1P25586 316 aaPredicted RBP2.29□□□□□ -2.04
VPS8YAL002W ANP1P32629 500 aa2.29□□□□□ -2.04
VPS8YAL002W TGL1P34163 548 aa2.29□□□□□ -2.04
VPS8YAL002W NOP4P37838 685 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W CCT5P40413 562 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W YCG1Q06680 1035 aa2.29□□□□□ -2.04
VPS8YAL002W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
VPS8YAL002W SDH5Q08230 162 aa2.29□□□□□ -2.04
VPS8YAL002W COX17Q12287 69 aa2.29□□□□□ -2.04
VPS8YAL002W CAT8P39113 1433 aa2.29□□□□□ -2.04
VPS8YAL002W SAS3P34218 831 aa2.29□□□□□ -2.04
VPS8YAL002W MUD2P36084 527 aaKnown RBP2.29□□□□□ -2.04
VPS8YAL002W LNP1P38878 278 aa2.29□□□□□ -2.04
VPS8YAL002W VTC2P43585 828 aa2.29□□□□□ -2.04
VPS8YAL002W SGM1P47166 707 aa2.29□□□□□ -2.04
VPS8YAL002W MRPL13Q02204 264 aa2.29□□□□□ -2.04
VPS8YAL002W KCS1Q12494 1050 aa2.29□□□□□ -2.04
VPS8YAL002W YLR302CO13544 120 aa2.28□□□□□ -2.04
VPS8YAL002W RIT1P23796 513 aa2.28□□□□□ -2.04
VPS8YAL002W SRO9P25567 434 aaKnown RBP2.28□□□□□ -2.04
VPS8YAL002W NGG1P32494 702 aa2.28□□□□□ -2.04
VPS8YAL002W NUP120P35729 1037 aa2.28□□□□□ -2.04
VPS8YAL002W TAF5P38129 798 aa2.28□□□□□ -2.04
VPS8YAL002W HXT6P39003 570 aaKnown RBP2.28□□□□□ -2.04
VPS8YAL002W HXT7P39004 570 aa2.28□□□□□ -2.04
VPS8YAL002W STL1P39932 569 aa2.28□□□□□ -2.04
VPS8YAL002W SET2P46995 733 aaKnown RBP2.28□□□□□ -2.04
VPS8YAL002W PHM7Q12252 991 aa2.28□□□□□ -2.04
VPS8YAL002W ADH4P10127 382 aa2.28□□□□□ -2.04
VPS8YAL002W GUK1P15454 187 aaKnown RBP2.28□□□□□ -2.04
VPS8YAL002W PXA2P34230 853 aa2.28□□□□□ -2.04
VPS8YAL002W PES4P39684 611 aa2.28□□□□□ -2.04
VPS8YAL002W KAP123P40069 1113 aaKnown RBP2.28□□□□□ -2.04
VPS8YAL002W VHR1P40522 640 aa2.28□□□□□ -2.04
VPS8YAL002W ARA2Q04212 335 aa2.28□□□□□ -2.04
VPS8YAL002W RRG1Q12167 365 aaPredicted RBP2.28□□□□□ -2.04
VPS8YAL002W CLF1Q12309 687 aaPredicted RBP2.28□□□□□ -2.04
VPS8YAL002W SCM3Q12334 223 aa2.28□□□□□ -2.04
VPS8YAL002W HSH49Q99181 213 aaPredicted RBP2.28□□□□□ -2.04
VPS8YAL002W SPP41P38904 1435 aa2.28□□□□□ -2.04
VPS8YAL002W TSC11P40061 1430 aa2.28□□□□□ -2.04
VPS8YAL002W GAL10P04397 699 aa2.28□□□□□ -2.04
VPS8YAL002W SEC12P11655 471 aa2.28□□□□□ -2.04
VPS8YAL002W MIH1P23748 554 aa2.28□□□□□ -2.04
VPS8YAL002W BRF1P29056 596 aa2.28□□□□□ -2.04
VPS8YAL002W LIP5P32875 414 aa2.28□□□□□ -2.04
VPS8YAL002W STB5P38699 743 aa2.28□□□□□ -2.04
VPS8YAL002W RRT14P40470 206 aa2.28□□□□□ -2.04
VPS8YAL002W RSC1P53236 928 aa2.28□□□□□ -2.04
VPS8YAL002W MEP3P53390 489 aa2.28□□□□□ -2.04
VPS8YAL002W YMR187CQ03236 431 aa2.28□□□□□ -2.04
VPS8YAL002W SPN1Q06505 410 aaPredicted RBP2.28□□□□□ -2.04
VPS8YAL002W MCA1Q08601 432 aa2.28□□□□□ -2.04
VPS8YAL002W DPH6Q12429 685 aa2.28□□□□□ -2.04
VPS8YAL002W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
VPS8YAL002W PDR5P33302 1511 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W CYC7P00045 113 aa2.27□□□□□ -2.05
VPS8YAL002W VAS1P07806 1104 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W ERG20P08524 352 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W HOM3P10869 527 aa2.27□□□□□ -2.05
VPS8YAL002W RPC82P32349 654 aa2.27□□□□□ -2.05
VPS8YAL002W YKL100CP34248 587 aa2.27□□□□□ -2.05
VPS8YAL002W CAJ1P39101 391 aa2.27□□□□□ -2.05
VPS8YAL002W GPI8P49018 411 aa2.27□□□□□ -2.05
VPS8YAL002W YGR016WP53209 190 aa2.27□□□□□ -2.05
VPS8YAL002W BUD9P53226 547 aa2.27□□□□□ -2.05
VPS8YAL002W TRS130Q03660 1102 aa2.27□□□□□ -2.05
VPS8YAL002W AIM41Q12032 185 aa2.27□□□□□ -2.05
VPS8YAL002W SKM1Q12469 655 aa2.27□□□□□ -2.05
VPS8YAL002W ATG11Q12527 1178 aa2.27□□□□□ -2.05
VPS8YAL002W SPE1P08432 466 aa2.27□□□□□ -2.05
VPS8YAL002W AAC3P18238 307 aa2.27□□□□□ -2.05
VPS8YAL002W CDC60P26637 1090 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W YKR018CP36114 725 aa2.27□□□□□ -2.05
VPS8YAL002W FKH2P41813 862 aa2.27□□□□□ -2.05
VPS8YAL002W BNA1P47096 177 aa2.27□□□□□ -2.05
VPS8YAL002W BRE5P53741 515 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W CNM67P53865 581 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W NOP15P53927 220 aaPredicted RBP2.27□□□□□ -2.05
VPS8YAL002W CEG1Q01159 459 aaPredicted RBP2.27□□□□□ -2.05
VPS8YAL002W MTD1Q02046 320 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W RRP9Q06506 573 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W HUA2Q12134 243 aa2.27□□□□□ -2.05
VPS8YAL002W YLL058WQ12198 575 aa2.27□□□□□ -2.05
VPS8YAL002W ARP7Q12406 477 aa2.27□□□□□ -2.05
VPS8YAL002W TY1B-AO13527 1196 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W HIS7P33734 552 aaKnown RBP2.27□□□□□ -2.05
VPS8YAL002W VPS8P39702 1274 aa2.27□□□□□ -2.05
VPS8YAL002W RAD26P40352 1085 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms