RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 PXL1P36166 706 aa2.3□□□□□ -2.04
snR55snR55 ATP23P53722 227 aa2.3□□□□□ -2.04
snR55snR55 CPR8P53728 308 aa2.3□□□□□ -2.04
snR55snR55 BRE5P53741 515 aaKnown RBP2.3□□□□□ -2.04
snR55snR55 UFO1Q04511 668 aa2.3□□□□□ -2.04
snR55snR55 RPN7Q06103 429 aaKnown RBP2.3□□□□□ -2.04
snR55snR55 ORM2Q06144 216 aa2.3□□□□□ -2.04
snR55snR55 PRS5Q12265 496 aaKnown RBP2.3□□□□□ -2.04
snR55snR55 TUP1P16649 713 aa2.29□□□□□ -2.04
snR55snR55 PMA2P19657 947 aa2.29□□□□□ -2.04
snR55snR55 VBA3P25594 458 aa2.29□□□□□ -2.04
snR55snR55 ELF1P36053 145 aa2.29□□□□□ -2.04
snR55snR55 AKL1P38080 1108 aaKnown RBP2.29□□□□□ -2.04
snR55snR55 MAF1P41910 395 aa2.29□□□□□ -2.04
snR55snR55 SET2P46995 733 aaKnown RBP2.29□□□□□ -2.04
snR55snR55 HUL5P53119 910 aa2.29□□□□□ -2.04
snR55snR55 SCW4P53334 386 aaKnown RBP2.29□□□□□ -2.04
snR55snR55 SNP1Q00916 300 aaPredicted RBP2.29□□□□□ -2.04
snR55snR55 RSC9Q03124 581 aa2.29□□□□□ -2.04
snR55snR55 NGL2Q03264 515 aaKnown RBP2.29□□□□□ -2.04
snR55snR55 YFT2Q06676 274 aa2.29□□□□□ -2.04
snR55snR55 VPS36Q06696 566 aa2.29□□□□□ -2.04
snR55snR55 IZH3Q07959 543 aa2.29□□□□□ -2.04
snR55snR55 ASK1P35734 292 aa2.28□□□□□ -2.04
snR55snR55 PAM1P37304 830 aaKnown RBP2.28□□□□□ -2.04
snR55snR55 APN2P38207 520 aa2.28□□□□□ -2.04
snR55snR55 COS111P38308 924 aa2.28□□□□□ -2.04
snR55snR55 GDH3P39708 457 aa2.28□□□□□ -2.04
snR55snR55 NMD5P46970 1048 aa2.28□□□□□ -2.04
snR55snR55 IRC3Q06683 689 aa2.28□□□□□ -2.04
snR55snR55 POM34Q12445 299 aa2.28□□□□□ -2.04
snR55snR55 CDC9P04819 755 aa2.27□□□□□ -2.05
snR55snR55 EUG1P32474 517 aa2.27□□□□□ -2.05
snR55snR55 STO1P34160 861 aaKnown RBP2.27□□□□□ -2.05
snR55snR55 RPN10P38886 268 aaKnown RBP2.27□□□□□ -2.05
snR55snR55 CCT4P39078 528 aaKnown RBP2.27□□□□□ -2.05
snR55snR55 CAF16P43569 289 aa2.27□□□□□ -2.05
snR55snR55 NEW1Q08972 1196 aaKnown RBP2.27□□□□□ -2.05
snR55snR55 RPL7AP05737 244 aaKnown RBP2.26□□□□□ -2.05
snR55snR55 ERG20P08524 352 aaKnown RBP2.26□□□□□ -2.05
snR55snR55 AQY1P0CD91 305 aa2.26□□□□□ -2.05
snR55snR55 GAL11P19659 1081 aa2.26□□□□□ -2.05
snR55snR55 NTH1P32356 751 aa2.26□□□□□ -2.05
snR55snR55 HSL7P38274 827 aa2.26□□□□□ -2.05
snR55snR55 PCI8P40512 444 aa2.26□□□□□ -2.05
snR55snR55 BST1P43571 1029 aa2.26□□□□□ -2.05
snR55snR55 ERG13P54839 491 aaKnown RBP2.26□□□□□ -2.05
snR55snR55 TRS23Q03784 219 aa2.26□□□□□ -2.05
snR55snR55 RPL7BQ12213 244 aaKnown RBP2.26□□□□□ -2.05
snR55snR55 MNN4P36044 1178 aa2.25□□□□□ -2.05
snR55snR55 SSZ1P38788 538 aaKnown RBP2.25□□□□□ -2.05
snR55snR55 MNT3P40549 630 aa2.25□□□□□ -2.05
snR55snR55 BIT61P47041 543 aa2.25□□□□□ -2.05
snR55snR55 NHX1Q04121 633 aa2.25□□□□□ -2.05
snR55snR55 ISA1Q07821 250 aaPredicted RBP2.25□□□□□ -2.05
snR55snR55 HOG1P32485 435 aa2.24□□□□□ -2.05
snR55snR55 GCS1P35197 352 aa2.24□□□□□ -2.05
snR55snR55 SPC97P38863 823 aa2.24□□□□□ -2.05
snR55snR55 SNO3P43544 222 aa2.24□□□□□ -2.05
snR55snR55 YJR039WP47107 1121 aa2.24□□□□□ -2.05
snR55snR55 LSC1P53598 329 aaKnown RBP2.24□□□□□ -2.05
snR55snR55 MDM12Q92328 271 aa2.24□□□□□ -2.05
snR55snR55 CPA2P03965 1118 aaKnown RBP2.23□□□□□ -2.05
snR55snR55 ERR1P0CX10 437 aa2.23□□□□□ -2.05
snR55snR55 ERR2P0CX11 437 aa2.23□□□□□ -2.05
snR55snR55 NOP1P15646 327 aaKnown RBP2.23□□□□□ -2.05
snR55snR55 MEF1P25039 761 aa2.23□□□□□ -2.05
snR55snR55 YJL049WP47048 450 aa2.23□□□□□ -2.05
snR55snR55 SNU71P53207 620 aaKnown RBP2.23□□□□□ -2.05
snR55snR55 YNL018CP53976 612 aa2.23□□□□□ -2.05
snR55snR55 DAK1P54838 584 aaKnown RBP2.23□□□□□ -2.05
snR55snR55 RCR2Q03446 210 aaKnown RBP2.23□□□□□ -2.05
snR55snR55 DCS2Q12123 353 aa2.23□□□□□ -2.05
snR55snR55 ZPS1Q12512 249 aa2.23□□□□□ -2.05
snR55snR55 SEC3P33332 1336 aaKnown RBP2.22□□□□□ -2.05
snR55snR55 HEM1P09950 548 aaPredicted RBP2.22□□□□□ -2.05
snR55snR55 FRS1P15624 595 aaKnown RBP2.22□□□□□ -2.05
snR55snR55 YAP1P19880 650 aaKnown RBP2.22□□□□□ -2.05
snR55snR55 TSR4P25040 408 aa2.22□□□□□ -2.05
snR55snR55 RIM4P38741 713 aa2.22□□□□□ -2.05
snR55snR55 YHR202WP38887 602 aa2.22□□□□□ -2.05
snR55snR55 NUG1P40010 520 aaKnown RBP2.22□□□□□ -2.05
snR55snR55 JHD1P40034 492 aa2.22□□□□□ -2.05
snR55snR55 NUP53Q03790 475 aa2.22□□□□□ -2.05
snR55snR55 CRC1Q12289 327 aa2.22□□□□□ -2.05
snR55snR55 YLR111WQ12528 110 aa2.22□□□□□ -2.05
snR55snR55 YPT1P01123 206 aaKnown RBP2.21□□□□□ -2.06
snR55snR55 CIT2P08679 460 aa2.21□□□□□ -2.06
snR55snR55 SRD1P09007 221 aa2.21□□□□□ -2.06
snR55snR55 YER190C-BP0CX94 160 aa2.21□□□□□ -2.06
snR55snR55 YEL077W-AP0CX95 160 aa2.21□□□□□ -2.06
snR55snR55 YGR296C-BP0CX96 160 aa2.21□□□□□ -2.06
snR55snR55 YPL283W-BP0CX97 160 aa2.21□□□□□ -2.06
snR55snR55 YPR204C-AP0CX98 160 aa2.21□□□□□ -2.06
snR55snR55 KIN82P25341 720 aa2.21□□□□□ -2.06
snR55snR55 IMG2P25642 146 aaPredicted RBP2.21□□□□□ -2.06
snR55snR55 GSY2P27472 705 aa2.21□□□□□ -2.06
snR55snR55 MRPL9P31334 269 aa2.21□□□□□ -2.06
snR55snR55 RPC34P32910 317 aa2.21□□□□□ -2.06
snR55snR55 EXO1P39875 702 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms