RNA–Protein interactions for RNA: snR128

snR128, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR128, Length 126 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR128	snR128	CTR1	P49573	406 aa		0.22	□□□□□ -2.37
snR128	snR128	PRP31	P49704	494 aa	Predicted RBP	0.22	□□□□□ -2.37
snR128	snR128	EAF7	P53911	425 aa	Known RBP	0.22	□□□□□ -2.37
snR128	snR128	USA1	Q03714	838 aa		0.22	□□□□□ -2.37
snR128	snR128	YML020W	Q03722	664 aa		0.22	□□□□□ -2.37
snR128	snR128	NUP53	Q03790	475 aa		0.22	□□□□□ -2.37
snR128	snR128	ARA2	Q04212	335 aa		0.22	□□□□□ -2.37
snR128	snR128	ECM16	Q04217	1267 aa	Known RBP	0.22	□□□□□ -2.37
snR128	snR128	SCW10	Q04951	389 aa		0.22	□□□□□ -2.37
snR128	snR128	HRD3	Q05787	833 aa		0.22	□□□□□ -2.37
snR128	snR128	CRR1	Q05790	422 aa		0.22	□□□□□ -2.37
snR128	snR128	UBX5	Q06682	500 aa		0.22	□□□□□ -2.37
snR128	snR128	VPS36	Q06696	566 aa		0.22	□□□□□ -2.37
snR128	snR128	YDL086W	Q07505	273 aa		0.22	□□□□□ -2.37
snR128	snR128	MET7	Q08645	548 aa		0.22	□□□□□ -2.37
snR128	snR128	SRL1	Q08673	210 aa		0.22	□□□□□ -2.37
snR128	snR128	FAL1	Q12099	399 aa	Known RBP	0.22	□□□□□ -2.37
snR128	snR128	CHS5	Q12114	671 aa	Known RBP	0.22	□□□□□ -2.37
snR128	snR128	RPL7B	Q12213	244 aa	Known RBP	0.22	□□□□□ -2.37
snR128	snR128	CRC1	Q12289	327 aa		0.22	□□□□□ -2.37
snR128	snR128	YPR071W	Q12346	211 aa		0.22	□□□□□ -2.37
snR128	snR128	ZRT2	Q12436	422 aa		0.22	□□□□□ -2.37
snR128	snR128	RQC2	Q12532	1038 aa	Known RBP	0.22	□□□□□ -2.37
snR128	snR128	PRC1	P00729	532 aa		0.21	□□□□□ -2.38
snR128	snR128	ADE8	P04161	214 aa		0.21	□□□□□ -2.38
snR128	snR128	CAN1	P04817	590 aa		0.21	□□□□□ -2.38
snR128	snR128	CDC9	P04819	755 aa		0.21	□□□□□ -2.38
snR128	snR128	HMG1	P12683	1054 aa		0.21	□□□□□ -2.38
snR128	snR128	REV1	P12689	985 aa		0.21	□□□□□ -2.38
snR128	snR128	HOP1	P20050	605 aa		0.21	□□□□□ -2.38
snR128	snR128	RFA1	P22336	621 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	PRP28	P23394	588 aa		0.21	□□□□□ -2.38
snR128	snR128	PTP1	P25044	335 aa		0.21	□□□□□ -2.38
snR128	snR128	PER1	P25625	357 aa		0.21	□□□□□ -2.38
snR128	snR128	IMG2	P25642	146 aa	Predicted RBP	0.21	□□□□□ -2.38
snR128	snR128	CNE1	P27825	502 aa		0.21	□□□□□ -2.38
snR128	snR128	HEM3	P28789	327 aa		0.21	□□□□□ -2.38
snR128	snR128	CCR4	P31384	837 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	AAR2	P32357	355 aa	Predicted RBP	0.21	□□□□□ -2.38
snR128	snR128	GCS1	P35197	352 aa		0.21	□□□□□ -2.38
snR128	snR128	HES1	P35843	434 aa		0.21	□□□□□ -2.38
snR128	snR128	MNN4	P36044	1178 aa		0.21	□□□□□ -2.38
snR128	snR128	SAP190	P36123	1033 aa		0.21	□□□□□ -2.38
snR128	snR128	TRZ1	P36159	838 aa	Predicted RBP	0.21	□□□□□ -2.38
snR128	snR128	MGE1	P38523	228 aa		0.21	□□□□□ -2.38
snR128	snR128	IMD2	P38697	523 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	LEU5	P38702	357 aa		0.21	□□□□□ -2.38
snR128	snR128	REV7	P38927	245 aa		0.21	□□□□□ -2.38
snR128	snR128	KRE9	P39005	276 aa		0.21	□□□□□ -2.38
snR128	snR128	VPS8	P39702	1274 aa		0.21	□□□□□ -2.38
snR128	snR128	ERV46	P39727	415 aa		0.21	□□□□□ -2.38
snR128	snR128	EXO1	P39875	702 aa		0.21	□□□□□ -2.38
snR128	snR128	NUG1	P40010	520 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	YIL077C	P40508	320 aa		0.21	□□□□□ -2.38
snR128	snR128	YIL024C	P40543	189 aa		0.21	□□□□□ -2.38
snR128	snR128	CFD1	P40558	293 aa		0.21	□□□□□ -2.38
snR128	snR128	RLP7	P40693	322 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	OPT1	P40897	799 aa		0.21	□□□□□ -2.38
snR128	snR128	CDC1	P40986	491 aa		0.21	□□□□□ -2.38
snR128	snR128	BUD8	P41698	603 aa		0.21	□□□□□ -2.38
snR128	snR128	THI6	P41835	540 aa		0.21	□□□□□ -2.38
snR128	snR128	TES1	P41903	349 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	ALR2	P43553	858 aa		0.21	□□□□□ -2.38
snR128	snR128	YFL015C	P43578	164 aa		0.21	□□□□□ -2.38
snR128	snR128	ALG2	P43636	503 aa		0.21	□□□□□ -2.38
snR128	snR128	BIT61	P47041	543 aa		0.21	□□□□□ -2.38
snR128	snR128	YJR039W	P47107	1121 aa		0.21	□□□□□ -2.38
snR128	snR128	ENP2	P48234	707 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	MTR3	P48240	250 aa	Predicted RBP	0.21	□□□□□ -2.38
snR128	snR128	IMD3	P50095	523 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	SAP4	P53036	818 aa		0.21	□□□□□ -2.38
snR128	snR128	PCL10	P53124	433 aa		0.21	□□□□□ -2.38
snR128	snR128	LSC1	P53598	329 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	COP1	P53622	1201 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	ATP23	P53722	227 aa		0.21	□□□□□ -2.38
snR128	snR128	CWC24	P53769	259 aa		0.21	□□□□□ -2.38
snR128	snR128	IDP3	P53982	420 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	ALD6	P54115	500 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	ACS1	Q01574	713 aa		0.21	□□□□□ -2.38
snR128	snR128	TIM50	Q02776	476 aa		0.21	□□□□□ -2.38
snR128	snR128	FMP30	Q02883	468 aa		0.21	□□□□□ -2.38
snR128	snR128	EFR3	Q03653	782 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	CTK1	Q03957	528 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	UFO1	Q04511	668 aa		0.21	□□□□□ -2.38
snR128	snR128	YMR317W	Q04893	1140 aa		0.21	□□□□□ -2.38
snR128	snR128	YSH1	Q06224	779 aa	Predicted RBP	0.21	□□□□□ -2.38
snR128	snR128	YPS7	Q06325	596 aa		0.21	□□□□□ -2.38
snR128	snR128	TDA5	Q06417	326 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	ARR3	Q06598	404 aa		0.21	□□□□□ -2.38
snR128	snR128	BSP1	Q06604	576 aa		0.21	□□□□□ -2.38
snR128	snR128	RSC3	Q06639	885 aa		0.21	□□□□□ -2.38
snR128	snR128	YFT2	Q06676	274 aa		0.21	□□□□□ -2.38
snR128	snR128	STP4	Q07351	490 aa		0.21	□□□□□ -2.38
snR128	snR128	YLR001C	Q07895	862 aa		0.21	□□□□□ -2.38
snR128	snR128	MLH2	Q07980	695 aa		0.21	□□□□□ -2.38
snR128	snR128	BSC6	Q08280	497 aa		0.21	□□□□□ -2.38
snR128	snR128	NEW1	Q08972	1196 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	HER1	Q12276	1246 aa		0.21	□□□□□ -2.38
snR128	snR128	RDL1	Q12305	139 aa	Known RBP	0.21	□□□□□ -2.38
snR128	snR128	MDM12	Q92328	271 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 60 ms