RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	NAS2	P40555	220 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	YJR124C	P47159	448 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	ASK10	P48361	1146 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	PSP2	P50109	593 aa	Known RBP	4.92	□□□□□ -1.62
TRE1	YPL176C	RRT6	P53117	311 aa	Predicted RBP	4.92	□□□□□ -1.62
TRE1	YPL176C	PMT7	Q06644	662 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	APL4	Q12028	832 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	YLL054C	Q12244	843 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	ISA2	Q12425	185 aa		4.92	□□□□□ -1.62
TRE1	YPL176C	MIS1	P09440	975 aa	Known RBP	4.91	□□□□□ -1.62
TRE1	YPL176C	MTF2	P10849	440 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	HMG1	P12683	1054 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
TRE1	YPL176C	KAR3	P17119	729 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	AIP1	P46680	615 aa	Known RBP	4.91	□□□□□ -1.62
TRE1	YPL176C	YPL107W	Q02873	248 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	HAS1	Q03532	505 aa	Known RBP	4.91	□□□□□ -1.62
TRE1	YPL176C	ENA1	P13587	1091 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	OLE1	P21147	510 aa	Known RBP	4.91	□□□□□ -1.62
TRE1	YPL176C	YBL028C	P38202	106 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	GDI1	P39958	451 aa	Known RBP	4.91	□□□□□ -1.62
TRE1	YPL176C	YER010C	P40011	234 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	LCB2	P40970	561 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	CCM1	P48237	864 aa	Predicted RBP	4.91	□□□□□ -1.62
TRE1	YPL176C	GYP7	P48365	746 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	NUP84	P52891	726 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	YNR068C	P53754	272 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	CBK1	P53894	756 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	PEX13	P80667	386 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	ENA2	Q01896	1091 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	RMT2	Q03305	412 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	SOG2	Q08817	791 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	ENA5	Q12691	1091 aa		4.91	□□□□□ -1.62
TRE1	YPL176C	STE50	P25344	346 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	SGF29	P25554	259 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	YCL049C	P25577	312 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	PUP2	P32379	260 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	MRE11	P32829	692 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	LAS1	P36146	502 aa	Predicted RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	BUD16	P39988	312 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	SIP5	P40210	489 aa	Known RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	NOP9	P47077	666 aa	Known RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	NOG1	Q02892	647 aa	Known RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	RRN5	Q02983	363 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	COG8	Q04632	607 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	RSC3	Q06639	885 aa		4.9	□□□□□ -1.62
TRE1	YPL176C	CSR1	Q06705	408 aa	Known RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	PDH1	Q12428	516 aa	Known RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	GEA2	P39993	1459 aa	Known RBP	4.9	□□□□□ -1.62
TRE1	YPL176C	HOG1	P32485	435 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	NIP1	P32497	812 aa	Known RBP	4.9	□□□□□ -1.63
TRE1	YPL176C	SMI1	P32566	505 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	CCT7	P42943	550 aa	Known RBP	4.9	□□□□□ -1.63
TRE1	YPL176C	LSB6	P42951	607 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	GYP8	P43570	497 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	ENT3	P47160	408 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	CIK1	Q01649	594 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	MRPL13	Q02204	264 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	SFI1	Q12369	946 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	KCS1	Q12494	1050 aa		4.9	□□□□□ -1.63
TRE1	YPL176C	RPO31	P04051	1460 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	LEU2	P04173	364 aa	Predicted RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	ARG3	P05150	338 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	SUP35	P05453	685 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	RPB4	P20433	221 aa	Predicted RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	PRP28	P23394	588 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	RSC6	P25632	483 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	TIF5	P38431	405 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	PEX18	P38855	283 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	LYS14	P40971	790 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	ZIM17	P42844	174 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	HOP2	P53187	214 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	YML119W	Q03208	357 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	YDR306C	Q06640	478 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	GUP2	Q08929	609 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	RTN2	Q12443	393 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	MMS1	Q06211	1407 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	ATG2	P53855	1592 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	GPM1	P00950	247 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	CTT1	P06115	562 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	FUM1	P08417	488 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	PDC5	P16467	563 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	ATP12	P22135	325 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	GAR1	P28007	205 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	NGG1	P32494	702 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	CCL1	P37366	393 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	APM3	P38153	483 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	YJR039W	P47107	1121 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	SGF73	P53165	657 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	LSB1	P53281	241 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	YGR266W	P53326	701 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	PRO2	P54885	456 aa	Known RBP	4.89	□□□□□ -1.63
TRE1	YPL176C	OMS1	Q06668	471 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	NUR1	Q12066	484 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	DCS2	Q12123	353 aa		4.89	□□□□□ -1.63
TRE1	YPL176C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-DR6	P0CX70	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-ER1	P0CX71	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-LR2	P0CX72	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-PL	P0CX73	440 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms