RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C COQ9Q05779 260 aa10.05□□□□□ -0.8
SSN3YPL042C GPI13Q07830 1017 aa10.05□□□□□ -0.8
SSN3YPL042C NOC3Q07896 663 aaPredicted RBP10.05□□□□□ -0.8
SSN3YPL042C FAL1Q12099 399 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C RRP6Q12149 733 aaKnown RBP10.05□□□□□ -0.8
SSN3YPL042C YLL058WQ12198 575 aa10.05□□□□□ -0.8
SSN3YPL042C FRT1Q99332 602 aa10.05□□□□□ -0.8
SSN3YPL042C TRP2P00899 507 aaKnown RBP10.04□□□□□ -0.8
SSN3YPL042C DED1P06634 604 aaKnown RBP10.04□□□□□ -0.8
SSN3YPL042C PUP2P32379 260 aa10.04□□□□□ -0.8
SSN3YPL042C TFB1P32776 642 aa10.04□□□□□ -0.8
SSN3YPL042C COT1P32798 439 aa10.04□□□□□ -0.8
SSN3YPL042C CNS1P33313 385 aa10.04□□□□□ -0.8
SSN3YPL042C UIP5P36137 443 aa10.04□□□□□ -0.8
SSN3YPL042C MET18P40469 1032 aa10.04□□□□□ -0.8
SSN3YPL042C LCB2P40970 561 aa10.04□□□□□ -0.8
SSN3YPL042C AVT1P47082 602 aa10.04□□□□□ -0.8
SSN3YPL042C TAM41P53230 385 aa10.04□□□□□ -0.8
SSN3YPL042C RIO1Q12196 484 aaKnown RBP10.04□□□□□ -0.8
SSN3YPL042C TAF3Q12297 353 aa10.04□□□□□ -0.8
SSN3YPL042C POX1P13711 748 aa10.03□□□□□ -0.8
SSN3YPL042C NAM7P30771 971 aaKnown RBP10.03□□□□□ -0.8
SSN3YPL042C VPS35P34110 944 aa10.03□□□□□ -0.8
SSN3YPL042C PCH2P38126 564 aa10.03□□□□□ -0.8
SSN3YPL042C PCL7P40186 285 aa10.03□□□□□ -0.8
SSN3YPL042C MNT3P40549 630 aa10.03□□□□□ -0.8
SSN3YPL042C GPP1P41277 250 aaKnown RBP10.03□□□□□ -0.8
SSN3YPL042C IAH1P41734 238 aa10.03□□□□□ -0.8
SSN3YPL042C FIG4P42837 879 aa10.03□□□□□ -0.8
SSN3YPL042C YJR120WP47157 116 aa10.03□□□□□ -0.8
SSN3YPL042C YNL144CP53907 740 aa10.03□□□□□ -0.8
SSN3YPL042C ERG5P54781 538 aa10.03□□□□□ -0.8
SSN3YPL042C UME1Q03010 460 aa10.03□□□□□ -0.8
SSN3YPL042C VPS16Q03308 798 aa10.03□□□□□ -0.8
SSN3YPL042C ECM29P38737 1868 aa10.03□□□□□ -0.8
SSN3YPL042C SEN2P16658 377 aa10.02□□□□□ -0.8
SSN3YPL042C KIN82P25341 720 aa10.02□□□□□ -0.8
SSN3YPL042C NTG1P31378 399 aa10.02□□□□□ -0.8
SSN3YPL042C SPC105P53148 917 aa10.02□□□□□ -0.8
SSN3YPL042C VPS38Q05919 439 aa10.02□□□□□ -0.8
SSN3YPL042C REH1Q06709 432 aa10.02□□□□□ -0.8
SSN3YPL042C BRX1Q08235 291 aaKnown RBP10.02□□□□□ -0.8
SSN3YPL042C NEW1Q08972 1196 aaKnown RBP10.02□□□□□ -0.8
SSN3YPL042C SPO12P17123 173 aa10.02□□□□□ -0.81
SSN3YPL042C RRP43P25359 394 aaPredicted RBP10.02□□□□□ -0.81
SSN3YPL042C RSC6P25632 483 aa10.02□□□□□ -0.81
SSN3YPL042C GUT1P32190 709 aa10.02□□□□□ -0.81
SSN3YPL042C IRE1P32361 1115 aa10.02□□□□□ -0.81
SSN3YPL042C KTR2P33550 425 aa10.02□□□□□ -0.81
SSN3YPL042C EAF5P39995 279 aa10.02□□□□□ -0.81
SSN3YPL042C ATG3P40344 310 aa10.02□□□□□ -0.81
SSN3YPL042C RTT102P53330 157 aa10.02□□□□□ -0.81
SSN3YPL042C ECM11Q04110 302 aa10.02□□□□□ -0.81
SSN3YPL042C MCP2Q06567 569 aa10.02□□□□□ -0.81
SSN3YPL042C MLH2Q07980 695 aa10.02□□□□□ -0.81
SSN3YPL042C OSH2Q12451 1283 aa10.02□□□□□ -0.81
SSN3YPL042C SRF1Q12516 437 aa10.02□□□□□ -0.81
SSN3YPL042C PPR1P07272 904 aaPredicted RBP10.01□□□□□ -0.81
SSN3YPL042C RAD16P31244 790 aa10.01□□□□□ -0.81
SSN3YPL042C EFT1P32324 842 aaKnown RBP10.01□□□□□ -0.81
SSN3YPL042C MIA40P36046 403 aa10.01□□□□□ -0.81
SSN3YPL042C FLR1P38124 548 aa10.01□□□□□ -0.81
SSN3YPL042C YHR131CP38835 850 aa10.01□□□□□ -0.81
SSN3YPL042C TOK1P40310 691 aa10.01□□□□□ -0.81
SSN3YPL042C TMA108P40462 946 aa10.01□□□□□ -0.81
SSN3YPL042C SHQ1P40486 507 aaPredicted RBP10.01□□□□□ -0.81
SSN3YPL042C COS5P47187 383 aa10.01□□□□□ -0.81
SSN3YPL042C SHE4P51534 789 aa10.01□□□□□ -0.81
SSN3YPL042C TIM8P57744 87 aa10.01□□□□□ -0.81
SSN3YPL042C ADE12P80210 433 aaKnown RBP10.01□□□□□ -0.81
SSN3YPL042C YMR018WQ04364 514 aa10.01□□□□□ -0.81
SSN3YPL042C DON1Q05610 365 aa10.01□□□□□ -0.81
SSN3YPL042C IES4Q08561 116 aa10.01□□□□□ -0.81
SSN3YPL042C ICL2Q12031 575 aa10.01□□□□□ -0.81
SSN3YPL042C CHS2P14180 963 aa10□□□□□ -0.81
SSN3YPL042C IDI1P15496 288 aa10□□□□□ -0.81
SSN3YPL042C PAP1P29468 568 aaKnown RBP10□□□□□ -0.81
SSN3YPL042C MGE1P38523 228 aa10□□□□□ -0.81
SSN3YPL042C PET100P38958 111 aa10□□□□□ -0.81
SSN3YPL042C SMC2P38989 1170 aaKnown RBP10□□□□□ -0.81
SSN3YPL042C YAP5P40574 245 aa10□□□□□ -0.81
SSN3YPL042C PSP2P50109 593 aaKnown RBP10□□□□□ -0.81
SSN3YPL042C SPO19Q03029 223 aa10□□□□□ -0.81
SSN3YPL042C RSC58Q07979 502 aa10□□□□□ -0.81
SSN3YPL042C MAS2P11914 482 aa9.99□□□□□ -0.81
SSN3YPL042C TUP1P16649 713 aa9.99□□□□□ -0.81
SSN3YPL042C ASF2P32448 525 aaPredicted RBP9.99□□□□□ -0.81
SSN3YPL042C ECM4P36156 370 aa9.99□□□□□ -0.81
SSN3YPL042C SIT1P39980 628 aa9.99□□□□□ -0.81
SSN3YPL042C UTP5Q04177 643 aaKnown RBP9.99□□□□□ -0.81
SSN3YPL042C YLR297WQ05899 129 aa9.99□□□□□ -0.81
SSN3YPL042C PIN2Q12057 282 aa9.99□□□□□ -0.81
SSN3YPL042C TEF1P02994 458 aaKnown RBP9.99□□□□□ -0.81
SSN3YPL042C PDC6P26263 563 aaKnown RBP9.99□□□□□ -0.81
SSN3YPL042C MUD1P32605 298 aaKnown RBP9.99□□□□□ -0.81
SSN3YPL042C XRS2P33301 854 aa9.99□□□□□ -0.81
SSN3YPL042C CCC2P38995 1004 aa9.99□□□□□ -0.81
SSN3YPL042C SEC26P41810 973 aaKnown RBP9.99□□□□□ -0.81
SSN3YPL042C NUP84P52891 726 aa9.99□□□□□ -0.81
SSN3YPL042C DUS1P53759 423 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 88 ms