RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YIL001WP40560 513 aa8.99□□□□□ -0.97
RPD3YNL330C AXL1P40851 1208 aa8.99□□□□□ -0.97
RPD3YNL330C LSC1P53598 329 aaKnown RBP8.99□□□□□ -0.97
RPD3YNL330C YDR090CQ03193 310 aa8.99□□□□□ -0.97
RPD3YNL330C THI7Q05998 598 aa8.99□□□□□ -0.97
RPD3YNL330C ABP140Q08641 628 aaKnown RBP8.99□□□□□ -0.97
RPD3YNL330C FAP7Q12055 197 aaPredicted RBP8.99□□□□□ -0.97
RPD3YNL330C TRX1P22217 103 aaKnown RBP8.98□□□□□ -0.97
RPD3YNL330C KIN82P25341 720 aa8.98□□□□□ -0.97
RPD3YNL330C RRT12P25381 491 aa8.98□□□□□ -0.97
RPD3YNL330C DPH2P32461 534 aa8.98□□□□□ -0.97
RPD3YNL330C CBR1P38626 284 aaKnown RBP8.98□□□□□ -0.97
RPD3YNL330C RSM26P47141 266 aa8.98□□□□□ -0.97
RPD3YNL330C ERP6P53198 216 aa8.98□□□□□ -0.97
RPD3YNL330C YGR125WP53273 1036 aa8.98□□□□□ -0.97
RPD3YNL330C KAP95Q06142 861 aaKnown RBP8.98□□□□□ -0.97
RPD3YNL330C YOR059CQ08448 450 aaKnown RBP8.98□□□□□ -0.97
RPD3YNL330C ERP3Q12403 225 aa8.98□□□□□ -0.97
RPD3YNL330C GCD2P12754 651 aaPredicted RBP8.97□□□□□ -0.97
RPD3YNL330C MRPS28P21771 286 aa8.97□□□□□ -0.97
RPD3YNL330C RPC19P28000 142 aaKnown RBP8.97□□□□□ -0.97
RPD3YNL330C SLI15P38283 698 aa8.97□□□□□ -0.97
RPD3YNL330C YBP1P38315 674 aa8.97□□□□□ -0.97
RPD3YNL330C RFC3P38629 340 aa8.97□□□□□ -0.97
RPD3YNL330C SMF2P38778 549 aa8.97□□□□□ -0.97
RPD3YNL330C KHA1P40309 873 aa8.97□□□□□ -0.97
RPD3YNL330C SEC26P41810 973 aaKnown RBP8.97□□□□□ -0.97
RPD3YNL330C SNZ3P43545 298 aa8.97□□□□□ -0.97
RPD3YNL330C UBP6P43593 499 aaKnown RBP8.97□□□□□ -0.97
RPD3YNL330C SNZ2P53824 298 aa8.97□□□□□ -0.97
RPD3YNL330C YNL247WP53852 767 aaKnown RBP8.97□□□□□ -0.97
RPD3YNL330C ECM7Q06200 448 aa8.97□□□□□ -0.97
RPD3YNL330C TRE1Q08919 783 aa8.97□□□□□ -0.97
RPD3YNL330C YLR053CQ12026 108 aa8.97□□□□□ -0.97
RPD3YNL330C SLY1P22213 666 aa8.96□□□□□ -0.98
RPD3YNL330C YDJ1P25491 409 aaKnown RBP8.96□□□□□ -0.98
RPD3YNL330C HEM3P28789 327 aa8.96□□□□□ -0.98
RPD3YNL330C EFT1P32324 842 aaKnown RBP8.96□□□□□ -0.98
RPD3YNL330C MMS4P38257 691 aa8.96□□□□□ -0.98
RPD3YNL330C SWC5P38326 303 aa8.96□□□□□ -0.98
RPD3YNL330C OAF1P39720 1047 aaPredicted RBP8.96□□□□□ -0.98
RPD3YNL330C YJL045WP47052 634 aa8.96□□□□□ -0.98
RPD3YNL330C UBX4P54730 416 aa8.96□□□□□ -0.98
RPD3YNL330C DAK1P54838 584 aaKnown RBP8.96□□□□□ -0.98
RPD3YNL330C GPD1Q00055 391 aaKnown RBP8.96□□□□□ -0.98
RPD3YNL330C UBP2Q01476 1272 aa8.96□□□□□ -0.98
RPD3YNL330C CUS1Q02554 436 aaPredicted RBP8.96□□□□□ -0.98
RPD3YNL330C LGE1Q02796 332 aaKnown RBP8.96□□□□□ -0.98
RPD3YNL330C TRS130Q03660 1102 aa8.96□□□□□ -0.98
RPD3YNL330C CST9Q06032 482 aa8.96□□□□□ -0.98
RPD3YNL330C GPI13Q07830 1017 aa8.96□□□□□ -0.98
RPD3YNL330C SGT2Q12118 346 aaKnown RBP8.96□□□□□ -0.98
RPD3YNL330C GPM3Q12326 303 aa8.96□□□□□ -0.98
RPD3YNL330C SSC1P0CS90 654 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C REC107P21651 314 aa8.95□□□□□ -0.98
RPD3YNL330C CLB4P24871 460 aa8.95□□□□□ -0.98
RPD3YNL330C URA7P28274 579 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C SIN4P32259 974 aa8.95□□□□□ -0.98
RPD3YNL330C IRE1P32361 1115 aa8.95□□□□□ -0.98
RPD3YNL330C VPS29P38759 282 aa8.95□□□□□ -0.98
RPD3YNL330C QNS1P38795 714 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C SAH1P39954 449 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C MKT1P40850 830 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C RTA1P53047 317 aa8.95□□□□□ -0.98
RPD3YNL330C SQS1P53866 767 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C PEX29Q03370 554 aa8.95□□□□□ -0.98
RPD3YNL330C ADI1Q03677 179 aa8.95□□□□□ -0.98
RPD3YNL330C HFD1Q04458 532 aa8.95□□□□□ -0.98
RPD3YNL330C ADE13Q05911 482 aaKnown RBP8.95□□□□□ -0.98
RPD3YNL330C YOR238WQ08634 303 aa8.95□□□□□ -0.98
RPD3YNL330C AAD3P25612 363 aa8.94□□□□□ -0.98
RPD3YNL330C SEC1P30619 724 aaKnown RBP8.94□□□□□ -0.98
RPD3YNL330C RME1P32338 300 aaKnown RBP8.94□□□□□ -0.98
RPD3YNL330C RTG2P32608 588 aaKnown RBP8.94□□□□□ -0.98
RPD3YNL330C PEX2P32800 271 aa8.94□□□□□ -0.98
RPD3YNL330C TFC3P34111 1160 aa8.94□□□□□ -0.98
RPD3YNL330C YMC2P38087 329 aa8.94□□□□□ -0.98
RPD3YNL330C VID24P38263 362 aa8.94□□□□□ -0.98
RPD3YNL330C FLC2P39719 783 aa8.94□□□□□ -0.98
RPD3YNL330C PCL10P53124 433 aa8.94□□□□□ -0.98
RPD3YNL330C YNL108CP53929 270 aa8.94□□□□□ -0.98
RPD3YNL330C SLD5Q03406 294 aa8.94□□□□□ -0.98
RPD3YNL330C SHS1Q07657 551 aa8.94□□□□□ -0.98
RPD3YNL330C YLL058WQ12198 575 aa8.94□□□□□ -0.98
RPD3YNL330C SPE4Q12455 300 aa8.94□□□□□ -0.98
RPD3YNL330C AVL9Q12500 764 aa8.94□□□□□ -0.98
RPD3YNL330C GAL10P04397 699 aa8.93□□□□□ -0.98
RPD3YNL330C ASP3-2P0CX77 362 aa8.93□□□□□ -0.98
RPD3YNL330C ASP3-3P0CX78 362 aa8.93□□□□□ -0.98
RPD3YNL330C ASP3-4P0CX79 362 aa8.93□□□□□ -0.98
RPD3YNL330C ASP3-1P0CZ17 362 aa8.93□□□□□ -0.98
RPD3YNL330C PUT4P15380 627 aa8.93□□□□□ -0.98
RPD3YNL330C MEI4P29467 408 aa8.93□□□□□ -0.98
RPD3YNL330C BCS1P32839 456 aa8.93□□□□□ -0.98
RPD3YNL330C YME2P32843 850 aa8.93□□□□□ -0.98
RPD3YNL330C SKG6P32900 734 aaPredicted RBP8.93□□□□□ -0.98
RPD3YNL330C ETR1P38071 380 aa8.93□□□□□ -0.98
RPD3YNL330C SAW1P39735 261 aa8.93□□□□□ -0.98
RPD3YNL330C SCC4P40090 624 aa8.93□□□□□ -0.98
RPD3YNL330C ALG5P40350 334 aa8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms