RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C STB4P50104 949 aa9.62□□□□□ -0.87
SEC61YLR378C YNL247WP53852 767 aaKnown RBP9.62□□□□□ -0.87
SEC61YLR378C YNL108CP53929 270 aa9.62□□□□□ -0.87
SEC61YLR378C MUB1Q03162 620 aa9.62□□□□□ -0.87
SEC61YLR378C OMS1Q06668 471 aa9.62□□□□□ -0.87
SEC61YLR378C AIM39Q08223 395 aa9.62□□□□□ -0.87
SEC61YLR378C LRE1P25579 583 aaKnown RBP9.61□□□□□ -0.87
SEC61YLR378C SEC1P30619 724 aaKnown RBP9.61□□□□□ -0.87
SEC61YLR378C FRE1P32791 686 aa9.61□□□□□ -0.87
SEC61YLR378C HEL1P36113 551 aa9.61□□□□□ -0.87
SEC61YLR378C AGP2P38090 596 aa9.61□□□□□ -0.87
SEC61YLR378C PBP2P38151 413 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
SEC61YLR378C SWC5P38326 303 aa9.61□□□□□ -0.87
SEC61YLR378C VHC1P38329 1120 aa9.61□□□□□ -0.87
SEC61YLR378C PCA1P38360 1216 aa9.61□□□□□ -0.87
SEC61YLR378C MSG5P38590 489 aa9.61□□□□□ -0.87
SEC61YLR378C SAP1P39955 897 aaKnown RBP9.61□□□□□ -0.87
SEC61YLR378C DSE1P40077 573 aa9.61□□□□□ -0.87
SEC61YLR378C KHA1P40309 873 aa9.61□□□□□ -0.87
SEC61YLR378C RPT2P40327 437 aaKnown RBP9.61□□□□□ -0.87
SEC61YLR378C MDM38Q08179 573 aa9.61□□□□□ -0.87
SEC61YLR378C CIR2Q08822 631 aa9.61□□□□□ -0.87
SEC61YLR378C EMP46Q12396 444 aa9.61□□□□□ -0.87
SEC61YLR378C SEY1Q99287 776 aa9.61□□□□□ -0.87
SEC61YLR378C TOM1Q03280 3268 aa9.61□□□□□ -0.87
SEC61YLR378C AEP2P22136 580 aa9.6□□□□□ -0.87
SEC61YLR378C PLC1P32383 869 aa9.6□□□□□ -0.87
SEC61YLR378C ECM32P32644 1121 aaKnown RBP9.6□□□□□ -0.87
SEC61YLR378C NMD5P46970 1048 aa9.6□□□□□ -0.87
SEC61YLR378C ATG36P46983 293 aa9.6□□□□□ -0.87
SEC61YLR378C UTP13Q05946 817 aaKnown RBP9.6□□□□□ -0.87
SEC61YLR378C THI7Q05998 598 aa9.6□□□□□ -0.87
SEC61YLR378C ESC8Q08119 714 aa9.6□□□□□ -0.87
SEC61YLR378C YRR1Q12172 810 aa9.6□□□□□ -0.87
SEC61YLR378C REC8Q12188 680 aa9.6□□□□□ -0.87
SEC61YLR378C ADH4P10127 382 aa9.59□□□□□ -0.87
SEC61YLR378C SAT4P25333 603 aaKnown RBP9.59□□□□□ -0.87
SEC61YLR378C GAC1P28006 793 aa9.59□□□□□ -0.87
SEC61YLR378C SRB2P34162 210 aa9.59□□□□□ -0.87
SEC61YLR378C POP4P38336 279 aa9.59□□□□□ -0.87
SEC61YLR378C ARG2P40360 574 aa9.59□□□□□ -0.87
SEC61YLR378C TMA108P40462 946 aa9.59□□□□□ -0.87
SEC61YLR378C SAP185P40856 1058 aa9.59□□□□□ -0.87
SEC61YLR378C RGD2P43556 714 aa9.59□□□□□ -0.87
SEC61YLR378C SPO74P45819 413 aa9.59□□□□□ -0.87
SEC61YLR378C CTK3P46963 296 aaPredicted RBP9.59□□□□□ -0.87
SEC61YLR378C PFD1P46988 109 aa9.59□□□□□ -0.87
SEC61YLR378C CPR6P53691 371 aaKnown RBP9.59□□□□□ -0.87
SEC61YLR378C RCR2Q03446 210 aaKnown RBP9.59□□□□□ -0.87
SEC61YLR378C KAP95Q06142 861 aaKnown RBP9.59□□□□□ -0.87
SEC61YLR378C APC5Q08683 685 aa9.59□□□□□ -0.87
SEC61YLR378C VPS54Q12071 889 aa9.59□□□□□ -0.87
SEC61YLR378C LDB19Q12502 818 aa9.59□□□□□ -0.87
SEC61YLR378C VPS5Q92331 675 aa9.59□□□□□ -0.87
SEC61YLR378C GAL80P04387 435 aa9.58□□□□□ -0.88
SEC61YLR378C POT1P27796 417 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
SEC61YLR378C YME1P32795 747 aa9.58□□□□□ -0.88
SEC61YLR378C YIL054WP40524 105 aa9.58□□□□□ -0.88
SEC61YLR378C PXA1P41909 870 aa9.58□□□□□ -0.88
SEC61YLR378C POL31P46957 487 aa9.58□□□□□ -0.88
SEC61YLR378C HLJ1P48353 224 aa9.58□□□□□ -0.88
SEC61YLR378C YGR035CP53222 116 aa9.58□□□□□ -0.88
SEC61YLR378C YNL040WP53960 456 aaPredicted RBP9.58□□□□□ -0.88
SEC61YLR378C CDC55Q00362 526 aa9.58□□□□□ -0.88
SEC61YLR378C STP1Q00947 519 aa9.58□□□□□ -0.88
SEC61YLR378C MAG2Q06436 670 aaKnown RBP9.58□□□□□ -0.88
SEC61YLR378C DIS3Q08162 1001 aaKnown RBP9.58□□□□□ -0.88
SEC61YLR378C YDR018CQ12185 396 aa9.58□□□□□ -0.88
SEC61YLR378C HAP2P06774 265 aa9.57□□□□□ -0.88
SEC61YLR378C SLY1P22213 666 aa9.57□□□□□ -0.88
SEC61YLR378C PUF4P25339 888 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
SEC61YLR378C CCT2P39076 527 aaKnown RBP9.57□□□□□ -0.88
SEC61YLR378C SIP5P40210 489 aaKnown RBP9.57□□□□□ -0.88
SEC61YLR378C FMP30Q02883 468 aa9.57□□□□□ -0.88
SEC61YLR378C RKM2Q03942 479 aa9.57□□□□□ -0.88
SEC61YLR378C PRM6Q04705 352 aa9.57□□□□□ -0.88
SEC61YLR378C TAF9Q05027 157 aa9.57□□□□□ -0.88
SEC61YLR378C FMP25Q08023 583 aa9.57□□□□□ -0.88
SEC61YLR378C ACM1Q08981 209 aa9.57□□□□□ -0.88
SEC61YLR378C TAF10Q12030 206 aa9.57□□□□□ -0.88
SEC61YLR378C YML002WP0CF17 737 aa9.56□□□□□ -0.88
SEC61YLR378C PEP5P12868 1029 aa9.56□□□□□ -0.88
SEC61YLR378C MEI4P29467 408 aa9.56□□□□□ -0.88
SEC61YLR378C BIO2P32451 375 aa9.56□□□□□ -0.88
SEC61YLR378C LYS9P38999 446 aa9.56□□□□□ -0.88
SEC61YLR378C ERP2P39704 215 aa9.56□□□□□ -0.88
SEC61YLR378C YNL115CP53925 644 aa9.56□□□□□ -0.88
SEC61YLR378C THI20Q08224 551 aa9.56□□□□□ -0.88
SEC61YLR378C PKH2Q12236 1081 aaKnown RBP9.56□□□□□ -0.88
SEC61YLR378C GCR1P07261 785 aa9.56□□□□□ -0.88
SEC61YLR378C CIT2P08679 460 aa9.56□□□□□ -0.88
SEC61YLR378C YPK1P12688 680 aaKnown RBP9.56□□□□□ -0.88
SEC61YLR378C SDH2P21801 266 aa9.56□□□□□ -0.88
SEC61YLR378C MRPL7P36519 292 aa9.56□□□□□ -0.88
SEC61YLR378C ABZ1P37254 787 aaPredicted RBP9.56□□□□□ -0.88
SEC61YLR378C BRL1P38770 471 aa9.56□□□□□ -0.88
SEC61YLR378C ASG7P46993 209 aa9.56□□□□□ -0.88
SEC61YLR378C YJR079WP47126 109 aa9.56□□□□□ -0.88
SEC61YLR378C SPC98P53540 846 aa9.56□□□□□ -0.88
SEC61YLR378C SKY1Q03656 742 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms