RNA–Protein interactions for RNA: YKL030W

YKL030W, Transcript of Dubious open reading frame, yeast

Gene YKL030W, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKL030W	YKL030W	EXO5	P38289	585 aa		11.79	□□□□□ -0.52
YKL030W	YKL030W	CBR1	P38626	284 aa	Known RBP	11.79	□□□□□ -0.52
YKL030W	YKL030W	SMC2	P38989	1170 aa	Known RBP	11.79	□□□□□ -0.52
YKL030W	YKL030W	YEL075C	P39972	122 aa		11.79	□□□□□ -0.52
YKL030W	YKL030W	RRP6	Q12149	733 aa	Known RBP	11.79	□□□□□ -0.52
YKL030W	YKL030W	PDH1	Q12428	516 aa	Known RBP	11.79	□□□□□ -0.52
YKL030W	YKL030W	HIS5	P07172	385 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	RGR1	P19263	1082 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	AEP2	P22136	580 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	PPH22	P23595	377 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	GYP6	P32806	458 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	MRP4	P32902	394 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	PXL1	P36166	706 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	JNM1	P36224	373 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	ABZ1	P37254	787 aa	Predicted RBP	11.78	□□□□□ -0.52
YKL030W	YKL030W	RTT107	P38850	1070 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	YTA12	P40341	825 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	MMM1	P41800	426 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	VTC4	P47075	721 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	SFB2	P53953	876 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	TAF9	Q05027	157 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	HRD3	Q05787	833 aa		11.78	□□□□□ -0.52
YKL030W	YKL030W	DIS3	Q08162	1001 aa	Known RBP	11.78	□□□□□ -0.52
YKL030W	YKL030W	VMA4	P22203	233 aa	Known RBP	11.77	□□□□□ -0.53
YKL030W	YKL030W	QNS1	P38795	714 aa	Known RBP	11.77	□□□□□ -0.53
YKL030W	YKL030W	SSP1	P38871	571 aa		11.77	□□□□□ -0.53
YKL030W	YKL030W	PUS2	P53167	370 aa		11.77	□□□□□ -0.53
YKL030W	YKL030W	TUB4	P53378	473 aa		11.77	□□□□□ -0.53
YKL030W	YKL030W	YPL062W	Q02781	134 aa		11.77	□□□□□ -0.53
YKL030W	YKL030W	YHM2	Q04013	314 aa		11.77	□□□□□ -0.53
YKL030W	YKL030W	SIR1	P21691	654 aa		11.76	□□□□□ -0.53
YKL030W	YKL030W	YAP5	P40574	245 aa		11.76	□□□□□ -0.53
YKL030W	YKL030W	NSE1	Q07913	336 aa		11.76	□□□□□ -0.53
YKL030W	YKL030W	HMI1	Q12039	706 aa		11.76	□□□□□ -0.53
YKL030W	YKL030W	YBR053C	P38235	358 aa		11.75	□□□□□ -0.53
YKL030W	YKL030W	ARP1	P38696	384 aa		11.75	□□□□□ -0.53
YKL030W	YKL030W	YIL161W	P40449	235 aa	Known RBP	11.75	□□□□□ -0.53
YKL030W	YKL030W	STU2	P46675	888 aa		11.75	□□□□□ -0.53
YKL030W	YKL030W	TMN2	Q04562	672 aa		11.75	□□□□□ -0.53
YKL030W	YKL030W	ATG9	Q12142	997 aa		11.75	□□□□□ -0.53
YKL030W	YKL030W	EMP46	Q12396	444 aa		11.75	□□□□□ -0.53
YKL030W	YKL030W	RPS9A	O13516	197 aa	Known RBP	11.74	□□□□□ -0.53
YKL030W	YKL030W	RPS14A	P06367	137 aa	Known RBP	11.74	□□□□□ -0.53
YKL030W	YKL030W	PDC6	P26263	563 aa	Known RBP	11.74	□□□□□ -0.53
YKL030W	YKL030W	RRN6	P32786	894 aa		11.74	□□□□□ -0.53
YKL030W	YKL030W	HSP78	P33416	811 aa		11.74	□□□□□ -0.53
YKL030W	YKL030W	ATG12	P38316	186 aa		11.74	□□□□□ -0.53
YKL030W	YKL030W	RPS14B	P39516	138 aa	Known RBP	11.74	□□□□□ -0.53
YKL030W	YKL030W	SPO12	P17123	173 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	MIC60	P36112	540 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	TDA3	P38758	523 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	MED6	P38782	295 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	GYP8	P43570	497 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	STR2	P47164	639 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	ATH1	P48016	1211 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	SPG3	Q04398	127 aa	Predicted RBP	11.73	□□□□□ -0.53
YKL030W	YKL030W	OPY2	Q06810	360 aa		11.73	□□□□□ -0.53
YKL030W	YKL030W	NEW1	Q08972	1196 aa	Known RBP	11.73	□□□□□ -0.53
YKL030W	YKL030W	LPX1	Q12405	387 aa	Known RBP	11.73	□□□□□ -0.53
YKL030W	YKL030W	BI2	P03873	423 aa		11.72	□□□□□ -0.53
YKL030W	YKL030W	BI4	P03879	638 aa		11.72	□□□□□ -0.53
YKL030W	YKL030W	RPL17A	P05740	184 aa	Known RBP	11.72	□□□□□ -0.53
YKL030W	YKL030W	MRPL32	P25348	183 aa		11.72	□□□□□ -0.53
YKL030W	YKL030W	MPE1	P35728	441 aa	Known RBP	11.72	□□□□□ -0.53
YKL030W	YKL030W	YKL050C	P35736	922 aa		11.72	□□□□□ -0.53
YKL030W	YKL030W	RPL17B	P46990	184 aa	Known RBP	11.72	□□□□□ -0.53
YKL030W	YKL030W	AIM39	Q08223	395 aa		11.72	□□□□□ -0.53
YKL030W	YKL030W	YOR059C	Q08448	450 aa	Known RBP	11.72	□□□□□ -0.53
YKL030W	YKL030W	BI3	Q9ZZW7	517 aa		11.72	□□□□□ -0.53
YKL030W	YKL030W	FUS1	P11710	512 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	SRB2	P34162	210 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	ECM13	P38195	257 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	NEM1	P38757	446 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	PRK1	P40494	810 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	SNZ3	P43545	298 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	SNZ2	P53824	298 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	TOF2	Q02208	771 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	YDR222W	Q04925	415 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	PMT7	Q06644	662 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	ARP7	Q12406	477 aa		11.71	□□□□□ -0.53
YKL030W	YKL030W	CCP1	P00431	361 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	PUT4	P15380	627 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	EST1	P17214	699 aa	Predicted RBP	11.7	□□□□□ -0.54
YKL030W	YKL030W	PSE1	P32337	1089 aa	Known RBP	11.7	□□□□□ -0.54
YKL030W	YKL030W	PTC3	P34221	468 aa	Known RBP	11.7	□□□□□ -0.54
YKL030W	YKL030W	HXT5	P38695	592 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	GGA2	P38817	585 aa	Known RBP	11.7	□□□□□ -0.54
YKL030W	YKL030W	CHS6	P40955	746 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	UFE1	P41834	346 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
YKL030W	YKL030W	YGR111W	P53265	400 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	IMP4	P53941	290 aa	Known RBP	11.7	□□□□□ -0.54
YKL030W	YKL030W	SEG1	Q04279	960 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	THI20	Q08224	551 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	LCB4	Q12246	624 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	MPD2	Q99316	277 aa		11.7	□□□□□ -0.54
YKL030W	YKL030W	KAR3	P17119	729 aa		11.69	□□□□□ -0.54
YKL030W	YKL030W	MRM1	P25270	412 aa		11.69	□□□□□ -0.54
YKL030W	YKL030W	HSL7	P38274	827 aa		11.69	□□□□□ -0.54
YKL030W	YKL030W	ATG3	P40344	310 aa		11.69	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms